Factsheet for GSMUA_Achr7P10230_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078655	Potato	mitochondrion	45.45	55.56
Os02t0135900-01	Rice	plastid	52.92	53.27
KXG29421	Sorghum	cytosol, plastid	52.27	52.27
KRG97930	Soybean	cytosol, plastid	49.35	51.18
KRH38399	Soybean	cytosol	11.04	50.75
VIT_14s0006g01240.t01	Wine grape	cytosol, plastid	50.0	50.16
TraesCS6D01G090900.1	Wheat	cytosol	47.4	50.0
TraesCS6A01G102300.1	Wheat	cytosol, plastid	47.4	50.0
KRH30945	Soybean	cytosol, plastid	48.05	49.83
TraesCS6B01G130700.1	Wheat	cytosol	47.08	49.66
AT5G39790.3	Thale cress	cytosol, plastid	45.13	49.64
Bra025642.1-P	Field mustard	cytosol	44.48	49.64
Zm00001d015200_P003	Maize	plastid	50.32	46.83
CDY30270	Canola	cytosol	43.83	43.55
HORVU6Hr1G018500.10	Barley	plastid	46.75	42.23
CDX74426	Canola	golgi, mitochondrion, plastid	43.51	40.85
Solyc02g091530.2.1	Tomato	nucleus	46.1	38.69
GSMUA_Achr8P15220_001	Banana	endoplasmic reticulum	15.26	22.27
GSMUA_Achr2P11630_001	Banana	cytosol	12.99	22.1
GSMUA_Achr7P12210_001	Banana	cytosol	20.45	15.67
GSMUA_Achr4P25270_001	Banana	nucleus, plastid	17.86	13.85
GSMUA_Achr9P10940_001	Banana	cytosol	19.48	12.42

Protein Annotations

Gene3D:2.60.40.10	MapMan:3.2.2.4.6	InterPro:AMPK1_CBM	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009569	GO:GO:0009570
GO:GO:0009987	GO:GO:0010581	GO:GO:0019252	GO:GO:0030246	GO:GO:0030247	GO:GO:2001070
EnsemblPlantsGene:GSMUA_Achr7G10230_001	EnsemblPlants:GSMUA_Achr7P10230_001	EnsemblPlants:GSMUA_Achr7T10230_001	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set
UniProt:M0TGB1	PFAM:PF16561	PANTHER:PTHR10343	PANTHER:PTHR10343:SF61	SUPFAM:SSF81296	SignalP:SignalP-noTM
UniParc:UPI0002959918	:	:	:	:	:

Description

5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G10230_001]

Coordinates

chr7:-:8287258..8294539

Molecular Weight (calculated)

35204.0 Da

IEP (calculated)

5.309

GRAVY (calculated)

-0.364

Length

308 amino acids

Sequence
(BLAST)

001: MLDVNLCFNL FLLELVQNHT VLCNPSDRLW TVPRRLAYSR QRSACYRECH AYFSKIYPAK SCFYGRKSSR AFSISLGEEP SSLSEVENIS DIDDTVPTDS
101: SEEVLPQKLK SDELKALLVD TERKKLLKKL SEANQYNRFL KRQLLMEEDA IAKFKNELAV LELELQASTY TLVSLAEEIA NSGVQPDSRK INGRYIQSHL
201: LARLEAIHGK VKEQIKDVDT LKFEVSLFWV GMAESVHVMG SFDGWTQGEE MPPEYTGDYA RFSATLKLRP GRYEIKFLVD GEWKLSPDFP TIGEGIMQNN
301: LLVVEQNN

Best Arabidopsis Sequence Match ( AT5G39790.3 )
(BLAST)

001: MGCVPRIEFG CSSQSLTLSW NLRAWNLCRL NTISHFQKLP YPLVASTRKH YKNSLLLKRF LVGVGTEESS LSEDLLDESL SRPLTSDELK SLLIDTERSK
101: LVKKLSEANQ QNRFLKRQVL VFKTQEHEIT NIKTELALME LEVQALVKLA EEIANLGIPQ GSRKISGKYI QSHLLSRLDA VQKKMKEQIK GVEAAQSKEV
201: HVFWIGMAES VQVMGSFDGW SQREDLSPEY SALFTKFSTT LFLRPGRYEM KFLVDGEWQI SPEFPTSGEG LMENNVLVVE

Arabidopsis Description

5'-AMP-activated protein kinase-related [Source:TAIR;Acc:AT5G39790]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.