Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G130700.1 | Wheat | cytosol | 79.18 | 92.47 |
| TraesCS6A01G102300.1 | Wheat | cytosol, plastid | 78.59 | 91.78 |
| TraesCS6D01G090900.1 | Wheat | cytosol | 78.3 | 91.44 |
| KXG29421 | Sorghum | cytosol, plastid | 61.29 | 67.86 |
| Os02t0135900-01 | Rice | plastid | 60.7 | 67.65 |
| Zm00001d015200_P003 | Maize | plastid | 59.24 | 61.03 |
| PGSC0003DMT400078655 | Potato | mitochondrion | 39.88 | 53.97 |
| KRH38399 | Soybean | cytosol | 10.26 | 52.24 |
| GSMUA_Achr7P10230_001 | Banana | extracellular | 42.23 | 46.75 |
| KRG97930 | Soybean | cytosol, plastid | 40.47 | 46.46 |
| AT5G39790.3 | Thale cress | cytosol, plastid | 38.12 | 46.43 |
| Bra025642.1-P | Field mustard | cytosol | 37.54 | 46.38 |
| VIT_14s0006g01240.t01 | Wine grape | cytosol, plastid | 41.06 | 45.6 |
| KRH30945 | Soybean | cytosol, plastid | 38.42 | 44.11 |
| CDY30270 | Canola | cytosol | 37.24 | 40.97 |
| CDX74426 | Canola | golgi, mitochondrion, plastid | 37.24 | 38.72 |
| Solyc02g091530.2.1 | Tomato | nucleus | 41.06 | 38.15 |
| HORVU4Hr1G004470.4 | Barley | mitochondrion | 13.78 | 7.32 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G018500.10 | EnsemblPlantsGene:HORVU6Hr1G018500 | Gene3D:2.60.40.10 | InterPro:AMPK1_CBM | InterPro:IPR013783 | InterPro:Ig-like_fold |
| InterPro:Ig_E-set | ncoils:Coil | PANTHER:PTHR10343 | PANTHER:PTHR10343:SF61 | PFAM:PF16561 | SEG:seg |
| SUPFAM:SSF101447 | SUPFAM:SSF81296 | UniParc:UPI000B47E727 | UniProt:A0A287THC4 | MapMan:3.2.2.4.6 | : |
Description
No Description!
Coordinates
chrchr6H:+:47266293..47273978
Molecular Weight (calculated)
37577.6 Da
IEP (calculated)
8.991
GRAVY (calculated)
-0.460
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: AHTHTTQHSD ELHSGPRLSL PPPPPPPPPP PFDLRAPTPS SRHSPRGIAM ECLTAGFAAR SVGREYNFVC PSKPVGEKQW VPGRVLCYFT AHTNSSRCCK
101: VATGVCPISP VVGRRSRWRS FAASLNLENG PAPSSSTLSS SGQTSEQPTS AELKSLLADK ERSKLLRKLS EANQHNRFLK RQSQIKDDAA VKFRSELAVL
201: ELELQALVGL AEEIANFDIP AGSRKVNGKY IQSHLLSRLE AVHDKVMVQI KDIESLRPRE IAVHWVGMAE NVQIMGSFDG WSHGEAMSRE YSGDYARFSA
301: TLKLRPGSYE IKFLVDGEWK LSSEYPITGE GLTQNNKLAV E
101: VATGVCPISP VVGRRSRWRS FAASLNLENG PAPSSSTLSS SGQTSEQPTS AELKSLLADK ERSKLLRKLS EANQHNRFLK RQSQIKDDAA VKFRSELAVL
201: ELELQALVGL AEEIANFDIP AGSRKVNGKY IQSHLLSRLE AVHDKVMVQI KDIESLRPRE IAVHWVGMAE NVQIMGSFDG WSHGEAMSRE YSGDYARFSA
301: TLKLRPGSYE IKFLVDGEWK LSSEYPITGE GLTQNNKLAV E
001: MGCVPRIEFG CSSQSLTLSW NLRAWNLCRL NTISHFQKLP YPLVASTRKH YKNSLLLKRF LVGVGTEESS LSEDLLDESL SRPLTSDELK SLLIDTERSK
101: LVKKLSEANQ QNRFLKRQVL VFKTQEHEIT NIKTELALME LEVQALVKLA EEIANLGIPQ GSRKISGKYI QSHLLSRLDA VQKKMKEQIK GVEAAQSKEV
201: HVFWIGMAES VQVMGSFDGW SQREDLSPEY SALFTKFSTT LFLRPGRYEM KFLVDGEWQI SPEFPTSGEG LMENNVLVVE
101: LVKKLSEANQ QNRFLKRQVL VFKTQEHEIT NIKTELALME LEVQALVKLA EEIANLGIPQ GSRKISGKYI QSHLLSRLDA VQKKMKEQIK GVEAAQSKEV
201: HVFWIGMAES VQVMGSFDGW SQREDLSPEY SALFTKFSTT LFLRPGRYEM KFLVDGEWQI SPEFPTSGEG LMENNVLVVE
Arabidopsis Description
5'-AMP-activated protein kinase-related [Source:TAIR;Acc:AT5G39790]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.