Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74426 | Canola | golgi, mitochondrion, plastid | 80.32 | 75.91 |
| AT5G39790.3 | Thale cress | cytosol, plastid | 67.1 | 74.29 |
| PGSC0003DMT400078655 | Potato | mitochondrion | 41.94 | 51.59 |
| VIT_14s0006g01240.t01 | Wine grape | cytosol, plastid | 50.32 | 50.81 |
| KRH38399 | Soybean | cytosol | 10.97 | 50.75 |
| KRG97930 | Soybean | cytosol, plastid | 48.39 | 50.51 |
| KRH30945 | Soybean | cytosol, plastid | 47.1 | 49.16 |
| Os02t0135900-01 | Rice | plastid | 43.55 | 44.12 |
| GSMUA_Achr7P10230_001 | Banana | extracellular | 43.55 | 43.83 |
| TraesCS6B01G130700.1 | Wheat | cytosol | 40.65 | 43.15 |
| TraesCS6A01G102300.1 | Wheat | cytosol, plastid | 40.32 | 42.81 |
| KXG29421 | Sorghum | cytosol, plastid | 41.94 | 42.21 |
| TraesCS6D01G090900.1 | Wheat | cytosol | 39.68 | 42.12 |
| Zm00001d015200_P003 | Maize | plastid | 41.94 | 39.27 |
| HORVU6Hr1G018500.10 | Barley | plastid | 40.97 | 37.24 |
| Solyc02g091530.2.1 | Tomato | nucleus | 42.58 | 35.97 |
| CDY16216 | Canola | plastid | 18.71 | 11.44 |
| CDY14708 | Canola | plastid | 18.71 | 11.42 |
| CDY10381 | Canola | nucleus | 17.1 | 5.6 |
| CDX70309 | Canola | nucleus | 16.77 | 5.45 |
Protein Annotations
| EnsemblPlants:CDY30270 | EnsemblPlantsGene:GSBRNA2T00044921001 | Gene3D:2.60.40.10 | InterPro:AMPK1_CBM | InterPro:IPR013783 | InterPro:Ig-like_fold |
| InterPro:Ig_E-set | ncoils:Coil | PANTHER:PTHR10343 | PANTHER:PTHR10343:SF61 | PFAM:PF16561 | ProteinID:CDY30270 |
| ProteinID:CDY30270.1 | SEG:seg | SUPFAM:SSF81296 | UniParc:UPI0004EEB07E | UniProt:A0A078GUU3 | MapMan:3.2.2.4.6 |
Description
BnaC04g31810DBnaC04g31810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUU3]
Coordinates
chrLK032251:-:283978..285997
Molecular Weight (calculated)
35115.1 Da
IEP (calculated)
6.188
GRAVY (calculated)
-0.283
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHFCTSQGC VPRMEFGFLS NLFDTDLVHV PVLVLVLEHR HCLEQNLTLS WNLKASSLGS LATISHLQRL PLSMVASSRN HYKNSLLLKR YLVRVGSTEE
101: EHSLSEDSLD DSVSRPLTSD ELKSLLIDNQ RSKLVKKLSE ANQHNRFLKR QLKTQEDEIT SIKSELAIME LEVQALVNLA EEIANLGIPQ GSRKISGKYI
201: QSHLLTRLDA VHNKLKEQIK DVEAAQSKEV NVFWIGMAES VQVMGSFDGW SQPEDLSPEY TASFTKFSTT LVLRPGRYEM KFLVDGEWQI SREFPTSGEG
301: MLENNVLVVE
101: EHSLSEDSLD DSVSRPLTSD ELKSLLIDNQ RSKLVKKLSE ANQHNRFLKR QLKTQEDEIT SIKSELAIME LEVQALVNLA EEIANLGIPQ GSRKISGKYI
201: QSHLLTRLDA VHNKLKEQIK DVEAAQSKEV NVFWIGMAES VQVMGSFDGW SQPEDLSPEY TASFTKFSTT LVLRPGRYEM KFLVDGEWQI SREFPTSGEG
301: MLENNVLVVE
001: MGCVPRIEFG CSSQSLTLSW NLRAWNLCRL NTISHFQKLP YPLVASTRKH YKNSLLLKRF LVGVGTEESS LSEDLLDESL SRPLTSDELK SLLIDTERSK
101: LVKKLSEANQ QNRFLKRQVL VFKTQEHEIT NIKTELALME LEVQALVKLA EEIANLGIPQ GSRKISGKYI QSHLLSRLDA VQKKMKEQIK GVEAAQSKEV
201: HVFWIGMAES VQVMGSFDGW SQREDLSPEY SALFTKFSTT LFLRPGRYEM KFLVDGEWQI SPEFPTSGEG LMENNVLVVE
101: LVKKLSEANQ QNRFLKRQVL VFKTQEHEIT NIKTELALME LEVQALVKLA EEIANLGIPQ GSRKISGKYI QSHLLSRLDA VQKKMKEQIK GVEAAQSKEV
201: HVFWIGMAES VQVMGSFDGW SQREDLSPEY SALFTKFSTT LFLRPGRYEM KFLVDGEWQI SPEFPTSGEG LMENNVLVVE
Arabidopsis Description
5'-AMP-activated protein kinase-related [Source:TAIR;Acc:AT5G39790]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.