Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G029700.2 | Wheat | mitochondrion | 62.77 | 83.61 |
| TraesCS4A01G284000.1 | Wheat | mitochondrion, nucleus | 57.63 | 80.43 |
| TraesCS4D01G026700.2 | Wheat | plastid | 63.08 | 72.45 |
| Os03t0686900-01 | Rice | plastid | 49.38 | 59.92 |
| Zm00001d033529_P001 | Maize | plastid | 43.77 | 51.94 |
| OQU91183 | Sorghum | plastid | 44.39 | 48.89 |
| Zm00001d013530_P001 | Maize | plastid | 42.99 | 47.42 |
| Solyc01g010470.2.1 | Tomato | plastid | 13.4 | 46.49 |
| GSMUA_Achr8P15220_001 | Banana | endoplasmic reticulum | 15.26 | 46.45 |
| GSMUA_Achr7P12210_001 | Banana | cytosol | 23.21 | 37.06 |
| PGSC0003DMT400068857 | Potato | cytosol | 24.61 | 33.4 |
| Solyc05g006930.2.1 | Tomato | cytosol | 24.3 | 33.05 |
| KRH69376 | Soybean | plastid | 25.86 | 32.17 |
| GSMUA_Achr9P10940_001 | Banana | cytosol | 24.14 | 32.09 |
| VIT_01s0026g01510.t01 | Wine grape | plastid | 26.64 | 31.61 |
| CDY14708 | Canola | plastid | 24.77 | 31.3 |
| PGSC0003DMT400045404 | Potato | mitochondrion, plastid | 25.55 | 31.18 |
| CDY16216 | Canola | plastid | 24.45 | 30.97 |
| KRH74757 | Soybean | plastid | 24.92 | 30.95 |
| AT1G27070.1 | Thale cress | plastid | 24.61 | 29.7 |
| Bra024663.1-P | Field mustard | mitochondrion, nucleus | 26.01 | 18.47 |
| HORVU6Hr1G018500.10 | Barley | plastid | 7.32 | 13.78 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:3.2.1.1 | UniProt:A0A287N015 | InterPro:AMPK1_CBM | ncoils:Coil | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005975 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0019252 | GO:GO:0030246 | GO:GO:2000014 |
| GO:GO:2001066 | GO:GO:2001070 | EnsemblPlantsGene:HORVU4Hr1G004470 | EnsemblPlants:HORVU4Hr1G004470.4 | InterPro:IPR013783 | InterPro:Ig-like_fold |
| InterPro:Ig_E-set | PFAM:PF16561 | PANTHER:PTHR10343 | PANTHER:PTHR10343:SF47 | SUPFAM:SSF81296 | UniParc:UPI000B470A3F |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:10019387..10025799
Molecular Weight (calculated)
70481.4 Da
IEP (calculated)
10.136
GRAVY (calculated)
-0.762
Length
642 amino acids
Sequence
(BLAST)
(BLAST)
001: IKSKGLKSAG PSVARASLIR GLWRRSAATA ASGGVAVNQA DILRSAHPQA RQPSGSRRAR RDRDVTWART AASWLYLWWW TDGALFFFVS PLPPSSALRL
101: RAPAVAARGA AEKCDRDAPI PPPLAAPPSP NPTPAPRARP SPPPRLRRPA RRPQLRPPRL RRQPYRRRPA PAQVPRSSQS NAPPPPPQQG GPRGQEELEA
201: AIYDFMRRSD KPGAFPTRAE LLAAGRNDLA AAVESSGGWL SLGWSWSSSD DGDARRPAAS SAGPGAHPDY PPEAGPSGRA PNASADSCRE QQEPTPSGRQ
301: PVTEETAEAG SGAGLEGMLT RLRRERERAR PPPHSKNQAG RQGQNGALMN HNGAPGRSPT DGIYTRRVPD NGNIRSSYSQ NGILEDNKPS TSAKDAWRTW
401: SLDNSRFSDF QAAEIDPWSR ELPKRVDLDT VLMQDDVPGP SNGVAINGYS SDHVDSGRDE IHARLQNLEL DLTDALKTLK SRFDGVSLDM SNGETADVVN
501: GLSDDWEFEE TKVMHAQEEL RSIRAKIAVL EGKMALEIIE KNRVIEEKQT RLDEVEKALS ELRTVYIVWS NPASEVLLTG SFDGWTSQRR MEKSERGIFS
601: LNLRLYPGRY EIKFIVDGVW KNDPLRPTVN NHGNENNLVI VT
101: RAPAVAARGA AEKCDRDAPI PPPLAAPPSP NPTPAPRARP SPPPRLRRPA RRPQLRPPRL RRQPYRRRPA PAQVPRSSQS NAPPPPPQQG GPRGQEELEA
201: AIYDFMRRSD KPGAFPTRAE LLAAGRNDLA AAVESSGGWL SLGWSWSSSD DGDARRPAAS SAGPGAHPDY PPEAGPSGRA PNASADSCRE QQEPTPSGRQ
301: PVTEETAEAG SGAGLEGMLT RLRRERERAR PPPHSKNQAG RQGQNGALMN HNGAPGRSPT DGIYTRRVPD NGNIRSSYSQ NGILEDNKPS TSAKDAWRTW
401: SLDNSRFSDF QAAEIDPWSR ELPKRVDLDT VLMQDDVPGP SNGVAINGYS SDHVDSGRDE IHARLQNLEL DLTDALKTLK SRFDGVSLDM SNGETADVVN
501: GLSDDWEFEE TKVMHAQEEL RSIRAKIAVL EGKMALEIIE KNRVIEEKQT RLDEVEKALS ELRTVYIVWS NPASEVLLTG SFDGWTSQRR MEKSERGIFS
601: LNLRLYPGRY EIKFIVDGVW KNDPLRPTVN NHGNENNLVI VT
001: MVSINSGPIS SFVSRYSMID SDTLLHLSSF GSTFNPNYKA KACIRFARKV CGSTVLGFLE VKPRKKSCCS RCNGVSRMCN KRNLGWDSEG SKDLETEILE
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS
Arabidopsis Description
PTST2Protein PTST homolog 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LFY0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.