CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74757	Soybean	plastid	86.63	86.46
Solyc01g010470.2.1	Tomato	plastid	18.41	51.35
GSMUA_Achr8P15220_001	Banana	endoplasmic reticulum	20.93	51.18
Solyc05g006930.2.1	Tomato	cytosol	35.47	38.77
GSMUA_Achr7P12210_001	Banana	cytosol	29.65	38.06
PGSC0003DMT400068857	Potato	cytosol	34.88	38.05
VIT_01s0026g01510.t01	Wine grape	plastid	38.95	37.15
CDY14708	Canola	plastid	35.85	36.42
CDY16216	Canola	plastid	35.47	36.09
PGSC0003DMT400045404	Potato	mitochondrion, plastid	34.69	34.03
AT1G27070.1	Thale cress	plastid	35.08	34.02
TraesCS4B01G029700.2	Wheat	mitochondrion	30.81	32.99
TraesCS4A01G284000.1	Wheat	mitochondrion, nucleus	29.26	32.83
GSMUA_Achr9P10940_001	Banana	cytosol	29.46	31.47
Os03t0686900-01	Rice	plastid	32.17	31.38
Zm00001d033529_P001	Maize	plastid	31.98	30.5
TraesCS4D01G026700.2	Wheat	plastid	31.59	29.16
OQU91183	Sorghum	plastid	32.75	28.99
Zm00001d013530_P001	Maize	plastid	31.59	28.01
HORVU4Hr1G004470.4	Barley	mitochondrion	32.17	25.86
Bra024663.1-P	Field mustard	mitochondrion, nucleus	35.47	20.24
KRG97930	Soybean	cytosol, plastid	11.05	19.19
KRH30945	Soybean	cytosol, plastid	10.85	18.86
KRH32502	Soybean	plastid	17.05	14.64
KRH19891	Soybean	plastid	16.67	13.83
KRH38399	Soybean	cytosol	0.97	7.46

Protein Annotations

EMBL:ACUP02000703	EnsemblPlants:KRH69376	EnsemblPlantsGene:GLYMA_02G022500	EntrezGene:100814629	Gene3D:2.60.40.10	InterPro:AMPK1_CBM
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	ncoils:Coil	PANTHER:PTHR10343	PANTHER:PTHR10343:SF47
PFAM:PF16561	ProteinID:KRH69376	ProteinID:KRH69376.1	SEG:seg	SUPFAM:SSF81296	UniParc:UPI0002336C22
UniProt:K7K608	MapMan:3.2.1.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:2049804..2054885

Molecular Weight (calculated)

57231.0 Da

IEP (calculated)

5.107

GRAVY (calculated)

-0.519

Length

516 amino acids

Sequence
(BLAST)

001: MHFLTAPSYL SLLSPHLTPS LAPPLHFPAS TGRVRRFAVE TGSVLRSSLW KVNRYKGLWL SCTGFLRRCK DWDGEFSSLE SQILDFMQNT DKPEVFPTKE
101: ELVAAGRVDL VNAIVNEGGW LAFGWDLNGG SSEILGFEDN SGGGIEGNGA QASGVSSSSP SQSDNSVGIE AGKSGIEGIL SRLEKQRNRS FGLDLDNVSF
201: ENNEDKDEWD PRTTTDTMAA GLENGSRASS SSSTSSHLSG SQIKHDPHGS QLGTENLRNS LKPETWRSWI IQRTGFLDTD FEDAEIVPNE TEKGGMSDAS
301: RQPDILNRRE LSSEHINRET GLYSLDGNAN HSDIKSRIQN LESELSSILH LLRSSSDKIT MQMVQKSSSD DLAKLSDAWE FQENEIMNAQ DRLRSIRAKL
401: SVLEGKMALA IMDAHKVVEE KQKKINNAQK ALQILKTTCV VWPNSASEVL LTGSFDGWST KRKMERLSSG IFSLNLQLYP GRYEMKFIVD GEWKIDPLRP
501: VVTSNGYENN LLIIYD

Best Arabidopsis Sequence Match ( AT1G27070.1 )
(BLAST)

001: MVSINSGPIS SFVSRYSMID SDTLLHLSSF GSTFNPNYKA KACIRFARKV CGSTVLGFLE VKPRKKSCCS RCNGVSRMCN KRNLGWDSEG SKDLETEILE
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS

Arabidopsis Description

PTST2Protein PTST homolog 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LFY0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.