Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- nucleus 1
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19891 | Soybean | plastid | 70.72 | 68.33 |
| GSMUA_Achr2P11630_001 | Banana | cytosol | 14.97 | 49.72 |
| PGSC0003DMT400009856 | Potato | cytosol | 7.32 | 48.89 |
| Solyc09g008260.2.1 | Tomato | plastid | 26.96 | 35.29 |
| GSMUA_Achr4P25270_001 | Banana | nucleus, plastid | 22.13 | 33.5 |
| VIT_08s0007g05020.t01 | Wine grape | plastid | 27.79 | 29.66 |
| PGSC0003DMT400009851 | Potato | cytosol, mitochondrion, nucleus, peroxisome | 14.97 | 29.51 |
| AT5G03420.1 | Thale cress | plastid | 26.62 | 26.76 |
| KRG97930 | Soybean | cytosol, plastid | 9.15 | 18.52 |
| KRH30945 | Soybean | cytosol, plastid | 8.99 | 18.18 |
| CDY10381 | Canola | nucleus | 28.29 | 17.97 |
| KRH69376 | Soybean | plastid | 14.64 | 17.05 |
| Bra009530.1-P | Field mustard | nucleus | 26.62 | 16.79 |
| CDX70309 | Canola | nucleus | 26.62 | 16.75 |
| KRH74757 | Soybean | plastid | 14.31 | 16.63 |
| KRH38399 | Soybean | cytosol | 1.33 | 11.94 |
Protein Annotations
| EMBL:ACUP02006123 | EnsemblPlants:KRH32502 | EnsemblPlantsGene:GLYMA_10G054600 | EntrezGene:102665387 | Gene3D:2.60.40.10 | InterPro:AMPK1_CBM |
| InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:Ig_E-set | PANTHER:PTHR10343 | PANTHER:PTHR10343:SF64 | PFAM:PF16561 |
| ProteinID:KRH32502 | ProteinID:KRH32502.1 | SEG:seg | SUPFAM:SSF81296 | UniParc:UPI0002969455 | UniProt:K7LHM4 |
| MapMan:3.2.1.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:4949832..4956907
Molecular Weight (calculated)
66586.1 Da
IEP (calculated)
4.302
GRAVY (calculated)
-0.498
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSVWVCYFP SCTIFPCRQC KLSPTHLLQS STSISLLRVR ASQTTRAITR KSRRLKSDAE IRNDIREFLN SVGLPEDHIP STKELLLHGW NDLANIVRRR
101: GHKQIQELRT RSSLNDDADF LSAETSLDEG LDAANGFEDP LTGQSEKVDS LVDDIEALTE ILLGSSSGSL YVDSSSSLGE GTNIAEEAST NIVEDGLSEV
201: EDHAEVVNDV TEGNFYPTEL TSVDNDYDSS IMRTEISGEL PFEAVSSGNS EFEDSLVGKM VGEITLSLTE SHSNTSCNDS NLDTEDKEFS HLEPLVGFPL
301: EQKDLGALEG LNDSKDDIVE DVTTTSKVSV RENLSGDNKL DSVVHSAADS NSTNLDTLAN LSLKEKVANF IQNGDLDPVE GTHLPEDNNV MAHGNSLTSK
401: QVVPSGALDL DQPLWDDHLP HEDVTTHFNK DLDTEAPKVP NEIEINHLKF MLYQKESELS WLKEQIDKKK LALSVLQTKA EAEISKARKL ISEKDAELHV
501: AEGSLSELKE VQIEFCGDGD VVELAGSFNG WHHRIELDPQ QSTSALDLDG SRSSRCWSTM LWLYPGVYEI KFVVDGKWIT DPQRESVTRG HIRNNILRVD
601: R
101: GHKQIQELRT RSSLNDDADF LSAETSLDEG LDAANGFEDP LTGQSEKVDS LVDDIEALTE ILLGSSSGSL YVDSSSSLGE GTNIAEEAST NIVEDGLSEV
201: EDHAEVVNDV TEGNFYPTEL TSVDNDYDSS IMRTEISGEL PFEAVSSGNS EFEDSLVGKM VGEITLSLTE SHSNTSCNDS NLDTEDKEFS HLEPLVGFPL
301: EQKDLGALEG LNDSKDDIVE DVTTTSKVSV RENLSGDNKL DSVVHSAADS NSTNLDTLAN LSLKEKVANF IQNGDLDPVE GTHLPEDNNV MAHGNSLTSK
401: QVVPSGALDL DQPLWDDHLP HEDVTTHFNK DLDTEAPKVP NEIEINHLKF MLYQKESELS WLKEQIDKKK LALSVLQTKA EAEISKARKL ISEKDAELHV
501: AEGSLSELKE VQIEFCGDGD VVELAGSFNG WHHRIELDPQ QSTSALDLDG SRSSRCWSTM LWLYPGVYEI KFVVDGKWIT DPQRESVTRG HIRNNILRVD
601: R
001: MATISQIPFS ISFPCFEFRK PSFYYHQPQL FVSYLNSTKK HSFICFACST KQTRVRKRVK SNEELRSEIM QFVALAGLPE GHVPSMKELS AHGRVDLANI
101: VRRRGYKFIK ELVANSGMEE DCNELVADSE DNNTNIETGG SRACLEDSST DLSKEAEKQG SLSKDESSLA GVLSLENSFS NLGDSNHSGE ITEKIFKIES
201: VELNEIADIE NSSSEASVFA NHSQDLYDTS SCPDIEAGNV SMTEDEEVND VDKDFSLTFD HYTSPTSNHY TSPDLNSIKH VDIATGSSYD LTSENTMTNV
301: ENFQNQQIDD IAANRSGSAD DSLVESEDND WMSGLSSCTS SIEEKTTRFI QNGYLDTVGA DENDIPNESC PEESSETTKG GEYIGDSLGG PRIMSTPLNG
401: SALALKEIIH ATEVNSSDRN SDQRDGSVGL DTDPHHETRK RENQVEIDRL RFMLDQKELE LSRLKEQIEK EKLSLSVLQR QAETEIQKAQ MLISEKEVEL
501: QEAEESLSGL QEVVIEYCGD GNAVEVTGSF NGWQHRVGME LQASKSIGKQ KCWSTLLWLY PGTYEIKFIV DGQWITDPQK DSVTRGHISN NILKVDSQ
101: VRRRGYKFIK ELVANSGMEE DCNELVADSE DNNTNIETGG SRACLEDSST DLSKEAEKQG SLSKDESSLA GVLSLENSFS NLGDSNHSGE ITEKIFKIES
201: VELNEIADIE NSSSEASVFA NHSQDLYDTS SCPDIEAGNV SMTEDEEVND VDKDFSLTFD HYTSPTSNHY TSPDLNSIKH VDIATGSSYD LTSENTMTNV
301: ENFQNQQIDD IAANRSGSAD DSLVESEDND WMSGLSSCTS SIEEKTTRFI QNGYLDTVGA DENDIPNESC PEESSETTKG GEYIGDSLGG PRIMSTPLNG
401: SALALKEIIH ATEVNSSDRN SDQRDGSVGL DTDPHHETRK RENQVEIDRL RFMLDQKELE LSRLKEQIEK EKLSLSVLQR QAETEIQKAQ MLISEKEVEL
501: QEAEESLSGL QEVVIEYCGD GNAVEVTGSF NGWQHRVGME LQASKSIGKQ KCWSTLLWLY PGTYEIKFIV DGQWITDPQK DSVTRGHISN NILKVDSQ
Arabidopsis Description
PTSTProtein PTST homolog 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4KFB3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.