Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400009856 | Potato | cytosol | 20.99 | 42.22 |
| GSMUA_Achr4P25270_001 | Banana | nucleus, plastid | 70.17 | 31.99 |
| Solyc09g008260.2.1 | Tomato | plastid | 54.14 | 21.35 |
| GSMUA_Achr8P15220_001 | Banana | endoplasmic reticulum | 24.31 | 20.85 |
| KRH19891 | Soybean | plastid | 52.49 | 15.27 |
| PGSC0003DMT400009851 | Potato | cytosol, mitochondrion, nucleus, peroxisome | 25.41 | 15.08 |
| KRH32502 | Soybean | plastid | 49.72 | 14.97 |
| AT5G03420.1 | Thale cress | plastid | 48.07 | 14.55 |
| VIT_08s0007g05020.t01 | Wine grape | plastid | 43.09 | 13.85 |
| GSMUA_Achr7P10230_001 | Banana | extracellular | 22.1 | 12.99 |
| GSMUA_Achr7P12210_001 | Banana | cytosol | 25.97 | 11.69 |
| CDY10381 | Canola | nucleus | 48.07 | 9.2 |
| Bra009530.1-P | Field mustard | nucleus | 48.07 | 9.13 |
| CDX70309 | Canola | nucleus | 48.07 | 9.11 |
| GSMUA_Achr9P10940_001 | Banana | cytosol | 24.31 | 9.11 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P11630_001 | EnsemblPlants:GSMUA_Achr2T11630_001 | EnsemblPlantsGene:GSMUA_Achr2G11630_001 | Gene3D:2.60.40.10 | InterPro:AMPK1_CBM | InterPro:IPR013783 |
| InterPro:Ig-like_fold | InterPro:Ig_E-set | ncoils:Coil | PANTHER:PTHR10343 | PANTHER:PTHR10343:SF64 | PFAM:PF16561 |
| SUPFAM:SSF81296 | UniParc:UPI0002953D76 | UniProt:M0S754 | MapMan:3.2.1.2 | : | : |
Description
5-AMP-activated protein kinase-related, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G11630_001]
Coordinates
chr2:-:14414639..14417878
Molecular Weight (calculated)
20798.4 Da
IEP (calculated)
5.090
GRAVY (calculated)
-0.670
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGEDTELYQ DWAPKAHEQH NQNEINHLKS LLDQKEVELS QLKQQIENEK LALSNLHAKG MAELGDIQRT IAEKDAELHA AEENLDGLKE VHIDYWANGQ
101: TVEVTGSFNG WQHRVRLDLH PSSGQTNPRG LRKPLLWTTV LWLYPGVYEI KFIVDDHWRI DFQREIITSG GITNNLLRVD G
101: TVEVTGSFNG WQHRVRLDLH PSSGQTNPRG LRKPLLWTTV LWLYPGVYEI KFIVDDHWRI DFQREIITSG GITNNLLRVD G
001: MATISQIPFS ISFPCFEFRK PSFYYHQPQL FVSYLNSTKK HSFICFACST KQTRVRKRVK SNEELRSEIM QFVALAGLPE GHVPSMKELS AHGRVDLANI
101: VRRRGYKFIK ELVANSGMEE DCNELVADSE DNNTNIETGG SRACLEDSST DLSKEAEKQG SLSKDESSLA GVLSLENSFS NLGDSNHSGE ITEKIFKIES
201: VELNEIADIE NSSSEASVFA NHSQDLYDTS SCPDIEAGNV SMTEDEEVND VDKDFSLTFD HYTSPTSNHY TSPDLNSIKH VDIATGSSYD LTSENTMTNV
301: ENFQNQQIDD IAANRSGSAD DSLVESEDND WMSGLSSCTS SIEEKTTRFI QNGYLDTVGA DENDIPNESC PEESSETTKG GEYIGDSLGG PRIMSTPLNG
401: SALALKEIIH ATEVNSSDRN SDQRDGSVGL DTDPHHETRK RENQVEIDRL RFMLDQKELE LSRLKEQIEK EKLSLSVLQR QAETEIQKAQ MLISEKEVEL
501: QEAEESLSGL QEVVIEYCGD GNAVEVTGSF NGWQHRVGME LQASKSIGKQ KCWSTLLWLY PGTYEIKFIV DGQWITDPQK DSVTRGHISN NILKVDSQ
101: VRRRGYKFIK ELVANSGMEE DCNELVADSE DNNTNIETGG SRACLEDSST DLSKEAEKQG SLSKDESSLA GVLSLENSFS NLGDSNHSGE ITEKIFKIES
201: VELNEIADIE NSSSEASVFA NHSQDLYDTS SCPDIEAGNV SMTEDEEVND VDKDFSLTFD HYTSPTSNHY TSPDLNSIKH VDIATGSSYD LTSENTMTNV
301: ENFQNQQIDD IAANRSGSAD DSLVESEDND WMSGLSSCTS SIEEKTTRFI QNGYLDTVGA DENDIPNESC PEESSETTKG GEYIGDSLGG PRIMSTPLNG
401: SALALKEIIH ATEVNSSDRN SDQRDGSVGL DTDPHHETRK RENQVEIDRL RFMLDQKELE LSRLKEQIEK EKLSLSVLQR QAETEIQKAQ MLISEKEVEL
501: QEAEESLSGL QEVVIEYCGD GNAVEVTGSF NGWQHRVGME LQASKSIGKQ KCWSTLLWLY PGTYEIKFIV DGQWITDPQK DSVTRGHISN NILKVDSQ
Arabidopsis Description
PTSTProtein PTST homolog 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4KFB3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.