Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g008260.2.1 | Tomato | plastid | 63.93 | 42.48 |
| GSMUA_Achr2P11630_001 | Banana | cytosol | 15.08 | 25.41 |
| GSMUA_Achr4P25270_001 | Banana | nucleus, plastid | 24.59 | 18.89 |
| KRH32502 | Soybean | plastid | 29.51 | 14.97 |
| AT5G03420.1 | Thale cress | plastid | 28.85 | 14.72 |
| KRH19891 | Soybean | plastid | 29.18 | 14.31 |
| VIT_08s0007g05020.t01 | Wine grape | plastid | 24.26 | 13.14 |
| CDY10381 | Canola | nucleus | 32.46 | 10.47 |
| CDX70309 | Canola | nucleus | 29.18 | 9.32 |
| Bra009530.1-P | Field mustard | nucleus | 28.85 | 9.23 |
| PGSC0003DMT400068857 | Potato | cytosol | 14.1 | 9.09 |
| PGSC0003DMT400078655 | Potato | mitochondrion | 6.89 | 8.33 |
| PGSC0003DMT400045404 | Potato | mitochondrion, plastid | 12.79 | 7.41 |
| PGSC0003DMT400009856 | Potato | cytosol | 0.98 | 3.33 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400009851 | EnsemblPlantsGene:PGSC0003DMG401003864 | ncoils:Coil | PANTHER:PTHR10343 | PANTHER:PTHR10343:SF64 | PGSC:PGSC0003DMG401003864 |
| SEG:seg | UniParc:UPI0002949B25 | UniProt:M0ZX15 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG401003864]
Coordinates
chr9:-:5068683..5076629
Molecular Weight (calculated)
34237.7 Da
IEP (calculated)
4.068
GRAVY (calculated)
-0.562
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MKELSQNGRQ DLANIVRRRG YKLVKELLLT SKQPTYECIG EDGLVEKSED ESLDGEIADM AHDVSLPTEA SAVDDYTNDA SNDLILNSDE QNSGDQEPLG
101: YSFLEEKVAN FIQNGELDSI EDSCLEIFQR EGSVEGQNVI ETESTTPKEH IDLVCNGDGA EIFSENPMAL SIQHDEHPST QSSLMRNDSL STEYLTMTEG
201: IISADTEPHN MEIQAEINHL KFVLHQKELE LTQLKQQIEE EKHLLSILQI KAETEIREAE RLISEKDAEL NAAEDSLSGL KEVFKQPLVL TFPEFSRFFA
301: TATKV
101: YSFLEEKVAN FIQNGELDSI EDSCLEIFQR EGSVEGQNVI ETESTTPKEH IDLVCNGDGA EIFSENPMAL SIQHDEHPST QSSLMRNDSL STEYLTMTEG
201: IISADTEPHN MEIQAEINHL KFVLHQKELE LTQLKQQIEE EKHLLSILQI KAETEIREAE RLISEKDAEL NAAEDSLSGL KEVFKQPLVL TFPEFSRFFA
301: TATKV
001: MATISQIPFS ISFPCFEFRK PSFYYHQPQL FVSYLNSTKK HSFICFACST KQTRVRKRVK SNEELRSEIM QFVALAGLPE GHVPSMKELS AHGRVDLANI
101: VRRRGYKFIK ELVANSGMEE DCNELVADSE DNNTNIETGG SRACLEDSST DLSKEAEKQG SLSKDESSLA GVLSLENSFS NLGDSNHSGE ITEKIFKIES
201: VELNEIADIE NSSSEASVFA NHSQDLYDTS SCPDIEAGNV SMTEDEEVND VDKDFSLTFD HYTSPTSNHY TSPDLNSIKH VDIATGSSYD LTSENTMTNV
301: ENFQNQQIDD IAANRSGSAD DSLVESEDND WMSGLSSCTS SIEEKTTRFI QNGYLDTVGA DENDIPNESC PEESSETTKG GEYIGDSLGG PRIMSTPLNG
401: SALALKEIIH ATEVNSSDRN SDQRDGSVGL DTDPHHETRK RENQVEIDRL RFMLDQKELE LSRLKEQIEK EKLSLSVLQR QAETEIQKAQ MLISEKEVEL
501: QEAEESLSGL QEVVIEYCGD GNAVEVTGSF NGWQHRVGME LQASKSIGKQ KCWSTLLWLY PGTYEIKFIV DGQWITDPQK DSVTRGHISN NILKVDSQ
101: VRRRGYKFIK ELVANSGMEE DCNELVADSE DNNTNIETGG SRACLEDSST DLSKEAEKQG SLSKDESSLA GVLSLENSFS NLGDSNHSGE ITEKIFKIES
201: VELNEIADIE NSSSEASVFA NHSQDLYDTS SCPDIEAGNV SMTEDEEVND VDKDFSLTFD HYTSPTSNHY TSPDLNSIKH VDIATGSSYD LTSENTMTNV
301: ENFQNQQIDD IAANRSGSAD DSLVESEDND WMSGLSSCTS SIEEKTTRFI QNGYLDTVGA DENDIPNESC PEESSETTKG GEYIGDSLGG PRIMSTPLNG
401: SALALKEIIH ATEVNSSDRN SDQRDGSVGL DTDPHHETRK RENQVEIDRL RFMLDQKELE LSRLKEQIEK EKLSLSVLQR QAETEIQKAQ MLISEKEVEL
501: QEAEESLSGL QEVVIEYCGD GNAVEVTGSF NGWQHRVGME LQASKSIGKQ KCWSTLLWLY PGTYEIKFIV DGQWITDPQK DSVTRGHISN NILKVDSQ
Arabidopsis Description
PTSTProtein PTST homolog 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4KFB3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.