Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400009851 | Potato | cytosol, mitochondrion, nucleus, peroxisome | 42.48 | 63.93 |
| GSMUA_Achr2P11630_001 | Banana | cytosol | 21.35 | 54.14 |
| GSMUA_Achr4P25270_001 | Banana | nucleus, plastid | 31.59 | 36.52 |
| VIT_08s0007g05020.t01 | Wine grape | plastid | 34.64 | 28.24 |
| KRH32502 | Soybean | plastid | 35.29 | 26.96 |
| KRH19891 | Soybean | plastid | 35.73 | 26.37 |
| AT5G03420.1 | Thale cress | plastid | 33.99 | 26.09 |
| Solyc01g010470.2.1 | Tomato | plastid | 8.28 | 20.54 |
| CDY10381 | Canola | nucleus | 35.95 | 17.44 |
| Solyc02g091530.2.1 | Tomato | nucleus | 13.29 | 16.62 |
| Bra009530.1-P | Field mustard | nucleus | 34.42 | 16.58 |
| CDX70309 | Canola | nucleus | 34.42 | 16.54 |
| Solyc05g006930.2.1 | Tomato | cytosol | 14.6 | 14.19 |
| Solyc01g010460.2.1 | Tomato | plastid | 9.37 | 11.32 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:3.2.1.2 | InterPro:AMPK1_CBM | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0010581 | GO:GO:0019252 | InterPro:IPR013783 |
| InterPro:Ig-like_fold | InterPro:Ig_E-set | UniProt:K4CQL5 | PFAM:PF16561 | PANTHER:PTHR10343 | PANTHER:PTHR10343:SF64 |
| SUPFAM:SSF81296 | EnsemblPlantsGene:Solyc09g008260.2 | EnsemblPlants:Solyc09g008260.2.1 | UniParc:UPI000276BD03 | SEG:seg | : |
Description
No Description!
Coordinates
chr9:+:1729051..1737560
Molecular Weight (calculated)
51641.5 Da
IEP (calculated)
4.644
GRAVY (calculated)
-0.548
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLFHFPTS HKLFLPSQTL SPSICIRHNH HFFLICRSKS KIYASIKKSR ASRKVKSNDD LCNDIREFLS SVGLPEDHVP TMKELSQNGR QDLANIVRRR
101: GYKFVKELLL TSKQPAYECI GEDGLVEKSE DGSLDGKIAD MAHDVSLPSE ASAVDSYTND ASNDLILNSD EQNSGDQEFL GYSFLEEKVV NFIQNGELDS
201: IEGSGFEIFQ REGSIEGQNG AKILSGSPIA QSIQHDEHPS MQSSLMRNDS LSAEYLTMTE GISSADTEPH NMEIQAEINH LKFVLHQKEL ELTQLKQQIE
301: EEKRLLSVLQ IKAETEIREA ERLISEKDAE LNAAEDSLSG LKEVEIQYRA EGENVEVAGS FNGWHHKIKM DPQESPDPIG EDIQSSSDIV DPIGDDIQAS
401: SVIVNPIGMR EPRLWKTVLW LYPGIYEIKF VVDDRWTTDP QRESVTRGSI HNNVLRVDR
101: GYKFVKELLL TSKQPAYECI GEDGLVEKSE DGSLDGKIAD MAHDVSLPSE ASAVDSYTND ASNDLILNSD EQNSGDQEFL GYSFLEEKVV NFIQNGELDS
201: IEGSGFEIFQ REGSIEGQNG AKILSGSPIA QSIQHDEHPS MQSSLMRNDS LSAEYLTMTE GISSADTEPH NMEIQAEINH LKFVLHQKEL ELTQLKQQIE
301: EEKRLLSVLQ IKAETEIREA ERLISEKDAE LNAAEDSLSG LKEVEIQYRA EGENVEVAGS FNGWHHKIKM DPQESPDPIG EDIQSSSDIV DPIGDDIQAS
401: SVIVNPIGMR EPRLWKTVLW LYPGIYEIKF VVDDRWTTDP QRESVTRGSI HNNVLRVDR
001: MATISQIPFS ISFPCFEFRK PSFYYHQPQL FVSYLNSTKK HSFICFACST KQTRVRKRVK SNEELRSEIM QFVALAGLPE GHVPSMKELS AHGRVDLANI
101: VRRRGYKFIK ELVANSGMEE DCNELVADSE DNNTNIETGG SRACLEDSST DLSKEAEKQG SLSKDESSLA GVLSLENSFS NLGDSNHSGE ITEKIFKIES
201: VELNEIADIE NSSSEASVFA NHSQDLYDTS SCPDIEAGNV SMTEDEEVND VDKDFSLTFD HYTSPTSNHY TSPDLNSIKH VDIATGSSYD LTSENTMTNV
301: ENFQNQQIDD IAANRSGSAD DSLVESEDND WMSGLSSCTS SIEEKTTRFI QNGYLDTVGA DENDIPNESC PEESSETTKG GEYIGDSLGG PRIMSTPLNG
401: SALALKEIIH ATEVNSSDRN SDQRDGSVGL DTDPHHETRK RENQVEIDRL RFMLDQKELE LSRLKEQIEK EKLSLSVLQR QAETEIQKAQ MLISEKEVEL
501: QEAEESLSGL QEVVIEYCGD GNAVEVTGSF NGWQHRVGME LQASKSIGKQ KCWSTLLWLY PGTYEIKFIV DGQWITDPQK DSVTRGHISN NILKVDSQ
101: VRRRGYKFIK ELVANSGMEE DCNELVADSE DNNTNIETGG SRACLEDSST DLSKEAEKQG SLSKDESSLA GVLSLENSFS NLGDSNHSGE ITEKIFKIES
201: VELNEIADIE NSSSEASVFA NHSQDLYDTS SCPDIEAGNV SMTEDEEVND VDKDFSLTFD HYTSPTSNHY TSPDLNSIKH VDIATGSSYD LTSENTMTNV
301: ENFQNQQIDD IAANRSGSAD DSLVESEDND WMSGLSSCTS SIEEKTTRFI QNGYLDTVGA DENDIPNESC PEESSETTKG GEYIGDSLGG PRIMSTPLNG
401: SALALKEIIH ATEVNSSDRN SDQRDGSVGL DTDPHHETRK RENQVEIDRL RFMLDQKELE LSRLKEQIEK EKLSLSVLQR QAETEIQKAQ MLISEKEVEL
501: QEAEESLSGL QEVVIEYCGD GNAVEVTGSF NGWQHRVGME LQASKSIGKQ KCWSTLLWLY PGTYEIKFIV DGQWITDPQK DSVTRGHISN NILKVDSQ
Arabidopsis Description
PTSTProtein PTST homolog 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4KFB3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.