Factsheet for TraesCS4A01G284000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G029700.2	Wheat	mitochondrion	90.65	86.51
HORVU4Hr1G004470.4	Barley	mitochondrion	80.43	57.63
Os03t0686900-01	Rice	plastid	63.26	55.01
Zm00001d033529_P001	Maize	plastid	54.78	46.58
GSMUA_Achr8P15220_001	Banana	endoplasmic reticulum	21.09	45.97
Solyc01g010470.2.1	Tomato	plastid	18.04	44.86
OQU91183	Sorghum	plastid	55.87	44.08
Zm00001d013530_P001	Maize	plastid	54.13	42.78
GSMUA_Achr7P12210_001	Banana	cytosol	30.43	34.83
Solyc05g006930.2.1	Tomato	cytosol	32.61	31.78
PGSC0003DMT400068857	Potato	cytosol	32.61	31.71
GSMUA_Achr9P10940_001	Banana	cytosol	32.83	31.26
KRH69376	Soybean	plastid	32.83	29.26
VIT_01s0026g01510.t01	Wine grape	plastid	33.48	28.47
KRH74757	Soybean	plastid	31.52	28.05
PGSC0003DMT400045404	Potato	mitochondrion, plastid	31.96	27.95
CDY14708	Canola	plastid	30.65	27.76
CDY16216	Canola	plastid	30.43	27.61
AT1G27070.1	Thale cress	plastid	31.09	26.88
Bra024663.1-P	Field mustard	mitochondrion, nucleus	30.43	15.49
TraesCS6A01G102300.1	Wheat	cytosol, plastid	9.13	14.38

Protein Annotations

Gene3D:2.60.40.10	MapMan:3.2.1.1	InterPro:AMPK1_CBM	ncoils:Coil	GO:GO:0000003	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009791	GO:GO:0009987	GO:GO:0010581	GO:GO:0019252	GO:GO:0030246	GO:GO:0030247
GO:GO:2000014	GO:GO:2001066	GO:GO:2001070	GO:GO:2001071	InterPro:IPR013783	InterPro:Ig-like_fold
InterPro:Ig_E-set	PFAM:PF16561	PANTHER:PTHR10343	PANTHER:PTHR10343:SF47	SUPFAM:SSF81296	EnsemblPlantsGene:TraesCS4A01G284000
EnsemblPlants:TraesCS4A01G284000.1	TIGR:cd02859	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:590661142..590667513

Molecular Weight (calculated)

50829.8 Da

IEP (calculated)

5.026

GRAVY (calculated)

-0.707

Length

460 amino acids

Sequence
(BLAST)

001: MRRSDKPGAF PTRAELLAAG RADLAAAVES SGGWLSLGWS WSSDDDARRP AASTAGPGVH PEYPPEAGPS GRPPNSAADS VREQQEPAPS GRQPETEETE
101: EAGSGAGLEG MLARLRRERE RARPPPRSKN QAGGRGQNGA LMNHNGAPSR SPTNGMYTRR IPVNGNIHRS HSQNGIPEDN KSSSSANDAW RTWSLDKSRF
201: SDFEAAEIHP LSRKPPKHVD LNTVLIEDDV PGPSNGVVIN DYPSDHVDSE RDEIHARFQN LEFDLADSLK TLRSRFDGVS SYMSNGEEAD VVNGFSDDWE
301: FEETKVMHAQ EELRTIRAKI AVLEGKVALE IIEKNKIIEE KQTRLDEVEK ALSELRTVSV VWPNPASEVL LTGSFDGWTS QRRMEQSESG IFSYNLRLYP
401: GRYEVMACYS AFIVTAFSSS DSGCWFVLQI KFIVDGVWKN DPLRPSVNNH GNENNLMIVT

Best Arabidopsis Sequence Match ( AT5G03420.1 )
(BLAST)

001: MATISQIPFS ISFPCFEFRK PSFYYHQPQL FVSYLNSTKK HSFICFACST KQTRVRKRVK SNEELRSEIM QFVALAGLPE GHVPSMKELS AHGRVDLANI
101: VRRRGYKFIK ELVANSGMEE DCNELVADSE DNNTNIETGG SRACLEDSST DLSKEAEKQG SLSKDESSLA GVLSLENSFS NLGDSNHSGE ITEKIFKIES
201: VELNEIADIE NSSSEASVFA NHSQDLYDTS SCPDIEAGNV SMTEDEEVND VDKDFSLTFD HYTSPTSNHY TSPDLNSIKH VDIATGSSYD LTSENTMTNV
301: ENFQNQQIDD IAANRSGSAD DSLVESEDND WMSGLSSCTS SIEEKTTRFI QNGYLDTVGA DENDIPNESC PEESSETTKG GEYIGDSLGG PRIMSTPLNG
401: SALALKEIIH ATEVNSSDRN SDQRDGSVGL DTDPHHETRK RENQVEIDRL RFMLDQKELE LSRLKEQIEK EKLSLSVLQR QAETEIQKAQ MLISEKEVEL
501: QEAEESLSGL QEVVIEYCGD GNAVEVTGSF NGWQHRVGME LQASKSIGKQ KCWSTLLWLY PGTYEIKFIV DGQWITDPQK DSVTRGHISN NILKVDSQ

Arabidopsis Description

PTSTProtein PTST homolog 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4KFB3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.