Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- plasma membrane 2
- extracellular 2
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g036540.1.1 | Tomato | extracellular | 25.2 | 64.0 |
| Solyc02g011870.1.1 | Tomato | extracellular | 47.24 | 59.41 |
| HORVU5Hr1G032220.1 | Barley | endoplasmic reticulum | 45.67 | 57.43 |
| Solyc01g017240.1.1 | Tomato | plasma membrane | 40.16 | 43.22 |
| Solyc11g044670.1.1 | Tomato | plasma membrane | 55.91 | 35.68 |
| Solyc04g045540.1.1 | Tomato | plasma membrane | 54.33 | 23.71 |
| Solyc10g062330.1.1 | Tomato | plasma membrane | 55.91 | 23.59 |
| Solyc11g021310.1.1 | Tomato | nucleus, plastid | 55.91 | 18.07 |
| Solyc02g078310.1.1 | Tomato | extracellular | 7.09 | 17.31 |
| PGSC0003DMT400027612 | Potato | extracellular, plasma membrane | 11.81 | 16.67 |
| Solyc11g039900.1.1 | Tomato | endoplasmic reticulum, extracellular | 7.87 | 9.26 |
| KRH66155 | Soybean | endoplasmic reticulum, extracellular | 8.66 | 8.87 |
| VIT_09s0054g00520.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 57.48 | 7.23 |
| HORVU5Hr1G032230.1 | Barley | endoplasmic reticulum, extracellular, golgi | 2.36 | 6.67 |
| KRH72061 | Soybean | cytosol | 3.15 | 3.77 |
| Solyc11g021180.1.1 | Tomato | extracellular | 1.57 | 2.99 |
| Solyc05g047440.1.1 | Tomato | extracellular | 1.57 | 2.3 |
Protein Annotations
| EnsemblPlants:Solyc01g017480.1.1 | EnsemblPlantsGene:Solyc01g017480.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:TIC214 |
| PANTHER:PTHR33163 | PANTHER:PTHR33163:SF13 | PFAM:PF05758 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002762B1C |
| UniProt:K4AUS9 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:23953876..23954304
Molecular Weight (calculated)
14956.7 Da
IEP (calculated)
10.465
GRAVY (calculated)
0.464
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGTKMKVS TTIGFITAQL KIPHTIIVLT LPYLLLHFLW NNHKHFFDYG STTRNSMRNL SIKCVFLNNL LFQLFNHFIL SSSMLERLVN IYLFRCNNKI
101: LFVTGSFVGC LISHILFMPV SRIRWWV
101: LFVTGSFVGC LISHILFMPV SRIRWWV
001: MVFQSFILGN LVYLCMKIIN SVVVVGLYYG FLTTFSIGPS YLFLLRARVM DEGEEGTEKK VSATTGFIAG QLMMFISIYY APLHLALGRP HTITVLALPY
101: LLFHFFFWNN HKHFFDYGST TRNEMRNLRI QCVFPNNLIF KLFNHLILPS SMLARLVNIY MFRCNNKMLF VTSSFVVCVR MLLVEWAFPL FQLFLVMKV
101: LLFHFFFWNN HKHFFDYGST TRNEMRNLRI QCVFPNNLIF KLFNHLILPS SMLARLVNIY MFRCNNKMLF VTSSFVVCVR MLLVEWAFPL FQLFLVMKV
Arabidopsis Description
ORF199Uncharacterized mitochondrial protein AtMg00370 [Source:UniProtKB/Swiss-Prot;Acc:P93296]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.