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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 plastid: 20363867
extracellular: 22364583
plastid: 22908117
plastid: 26371478
extracellular: 29876421
msms PMID: 22908117 doi
C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID: 20363867 doi
C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID: 26371478 doi
M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
msms PMID: 22364583 doi
P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez
Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400045665 Potato cytosol, extracellular 98.41 98.41
KRH18900 Soybean endoplasmic reticulum 72.29 71.84
VIT_18s0001g05530.t01 Wine grape cytosol 68.15 69.26
CDX73353 Canola cytosol 67.52 66.88
CDY37093 Canola cytosol 67.52 66.88
CDY41873 Canola cytosol 67.2 66.56
CDX91750 Canola cytosol 66.88 66.25
Bra036764.1-P Field mustard cytosol 66.88 66.25
AT1G35720.1 Thale cress cytosol 66.24 65.62
Bra034402.1-P Field mustard cytosol 67.52 65.23
Solyc04g055170.2.1 Tomato plastid 65.29 64.87
EER88097 Sorghum cytosol 63.38 63.38
Os02t0753800-01 Rice cytosol, plasma membrane 63.38 63.38
GSMUA_Achr9P14750_001 Banana cytosol 63.69 63.29
EES05513 Sorghum cytosol 62.74 62.74
TraesCS7D01G181600.1 Wheat cytosol, golgi, unclear 62.42 62.42
Os06t0221200-01 Rice plasma membrane, plastid 62.74 62.15
TraesCS7B01G085300.1 Wheat cytosol 55.73 61.62
HORVU7Hr1G037080.3 Barley cytosol 61.78 61.59
TraesCS7A01G180100.1 Wheat cytosol, golgi, unclear 61.47 61.47
TraesCS6A01G300400.1 Wheat golgi, unclear 60.19 60.0
KRH54748 Soybean endoplasmic reticulum 33.44 59.66
GSMUA_Achr8P17240_001 Banana cytosol 59.87 59.49
TraesCS6D01G280300.1 Wheat cytosol, golgi, unclear 59.55 59.37
TraesCS6B01G330100.1 Wheat cytosol 59.55 59.37
Zm00001d037211_P001 Maize mitochondrion 62.74 57.94
Bra039578.1-P Field mustard cytosol, endoplasmic reticulum, plastid 48.09 56.98
GSMUA_Achr10P... Banana cytosol 56.37 56.01
CDY03132 Canola cytosol 38.53 55.5
Solyc05g051980.2.1 Tomato cytosol 57.32 51.87
GSMUA_AchrUn_... Banana cytosol 22.93 50.7
GSMUA_AchrUn_... Banana cytosol 22.61 50.0
HORVU6Hr1G074440.1 Barley mitochondrion 61.15 49.48
Solyc10g047240.1.1 Tomato cytosol 48.09 47.34
Solyc10g044690.1.1 Tomato cytosol 47.77 47.32
Zm00001d018090_P002 Maize plasma membrane 61.47 46.96
Solyc01g097540.2.1 Tomato cytosol, nucleus, peroxisome 43.95 43.4
Solyc01g097510.2.1 Tomato cytosol, nucleus, peroxisome 43.31 42.77
Solyc01g081530.1.1 Tomato cytosol 31.53 38.98
Solyc01g097520.2.1 Tomato nucleus 36.62 36.39
Solyc04g078820.2.1 Tomato nucleus 35.99 35.76
Solyc01g097550.2.1 Tomato cytosol 35.35 35.46
Solyc04g008270.2.1 Tomato cytosol 35.03 34.81
OQU93149 Sorghum plastid 25.8 25.08
Protein Annotations
Gene3D:1.10.220.10MapMan:35.1EMBL:AF079232InterPro:AnnexinInterPro:AnnexinD_plantInterPro:Annexin_repeat
InterPro:Annexin_repeat_CSInterPro:Annexin_sfGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004601
GO:GO:0005488GO:GO:0005507GO:GO:0005509GO:GO:0005515GO:GO:0005524GO:GO:0005544
GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005739GO:GO:0005773GO:GO:0005774GO:GO:0005829GO:GO:0005886GO:GO:0006810
GO:GO:0006950GO:GO:0006970GO:GO:0008150GO:GO:0008270GO:GO:0008289GO:GO:0009408
GO:GO:0009409GO:GO:0009414GO:GO:0009506GO:GO:0009507GO:GO:0009536GO:GO:0009570
GO:GO:0009579GO:GO:0009628GO:GO:0009651GO:GO:0009719GO:GO:0009737GO:GO:0009987
GO:GO:0016020GO:GO:0030312GO:GO:0042803GO:GO:0046686GO:GO:0048046GO:GO:0070588
GO:GO:0071435GO:GO:0098869InterPro:IPR037104UniProt:O81536PFAM:PF00191PRINTS:PR00196
PRINTS:PR01814ScanProsite:PS00223PANTHER:PTHR10502PANTHER:PTHR10502:SF98SMART:SM00335SUPFAM:SSF47874
EnsemblPlantsGene:Solyc04g073990.2EnsemblPlants:Solyc04g073990.2.1UniParc:UPI000009CB23:::
Description
Annexin D1 [Source:Projected from Arabidopsis thaliana (AT1G35720) UniProtKB/Swiss-Prot;Acc:Q9SYT0]
Coordinates
chr4:-:60016857..60019280
Molecular Weight (calculated)
35803.4 Da
IEP (calculated)
5.231
GRAVY (calculated)
-0.504
Length
314 amino acids
Sequence
(BLAST)
001: MASLTVPAEV PSVAEDCEQL RSAFKGWGTN EKLIISILAH RNAAQRKLIR QTYAETFGED LLKELDRELT HDFEKLVVVW TLDPAERDAY LAKEATKRWT
101: KSNFVLVEIA CTRSPKELVL AREAYHARNK KSLEEDVAYH TTGDHRKLLV PLVSSYRYGG DEVDLRLAKA ESKVLHEKIS DKAYSDDEVI RILATRSKAQ
201: LNATLNHYKD EYGEDILKQL EDEDEFVALL RATIKGLVYP EHYFVEVLRD AINRRGTEED HLTRVIATRA EVDLKTIANE YQKRDSVPLG RAIAKDTGGD
301: YENMLVALLG QEEE
Best Arabidopsis Sequence Match ( AT1G35720.1 )
(BLAST)
001: MATLKVSDSV PAPSDDAEQL RTAFEGWGTN EDLIISILAH RSAEQRKVIR QAYHETYGED LLKTLDKELS NDFERAILLW TLEPGERDAL LANEATKRWT
101: SSNQVLMEVA CTRTSTQLLH ARQAYHARYK KSLEEDVAHH TTGDFRKLLV SLVTSYRYEG DEVNMTLAKQ EAKLVHEKIK DKHYNDEDVI RILSTRSKAQ
201: INATFNRYQD DHGEEILKSL EEGDDDDKFL ALLRSTIQCL TRPELYFVDV LRSAINKTGT DEGALTRIVT TRAEIDLKVI GEEYQRRNSI PLEKAITKDT
301: RGDYEKMLVA LLGEDDA
Arabidopsis Description
ANN1Annexin [Source:UniProtKB/TrEMBL;Acc:A0A178WGZ8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.