Factsheet for Solyc04g055170.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 20363867
extracellular: 22364583
plastid: 22908117
plastid: 26371478
extracellular: 29876421

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004741	Potato	cytosol, mitochondrion	98.1	97.79
KRH59342	Soybean	endoplasmic reticulum	72.78	73.02
Bra024346.1-P	Field mustard	cytosol	72.78	72.78
CDY14530	Canola	cytosol	72.78	72.78
CDY33992	Canola	cytosol	72.47	72.47
Bra031890.1-P	Field mustard	cytosol	72.15	72.15
KRH43188	Soybean	endoplasmic reticulum	71.84	72.06
CDY71429	Canola	cytosol	51.27	70.74
AT5G65020.1	Thale cress	cytosol	70.89	70.66
AT5G10230.1	Thale cress	cytosol	70.25	70.25
CDX69852	Canola	cytosol	69.94	69.94
Bra009048.1-P	Field mustard	cytosol	69.94	69.94
CDX96984	Canola	cytosol	68.04	67.61
CDX69853	Canola	cytosol	68.04	67.61
Bra009049.1-P	Field mustard	cytosol	68.04	67.61
AT5G10220.1	Thale cress	cytosol	67.72	67.3
CDY08828	Canola	cytosol	49.68	66.24
Solyc04g073990.2.1	Tomato	plastid	64.87	65.29
Solyc05g051980.2.1	Tomato	cytosol	70.89	64.55
EER88097	Sorghum	cytosol	63.29	63.69
GSMUA_Achr8P17240_001	Banana	cytosol	62.66	62.66
TraesCS7D01G181600.1	Wheat	cytosol, golgi, unclear	62.03	62.42
HORVU7Hr1G037080.3	Barley	cytosol	62.03	62.22
EES05513	Sorghum	cytosol	61.71	62.1
GSMUA_Achr9P14750_001	Banana	cytosol	62.03	62.03
Os06t0221200-01	Rice	plasma membrane, plastid	61.71	61.51
Os02t0753800-01	Rice	cytosol, plasma membrane	61.08	61.47
TraesCS7B01G085300.1	Wheat	cytosol	55.06	61.27
TraesCS7A01G180100.1	Wheat	cytosol, golgi, unclear	60.76	61.15
CDX96985	Canola	cytosol	40.19	60.19
Zm00001d037211_P001	Maize	mitochondrion	62.66	58.24
TraesCS6B01G330100.1	Wheat	cytosol	57.91	58.1
TraesCS6D01G280300.1	Wheat	cytosol, golgi, unclear	57.59	57.78
GSMUA_Achr10P...	Banana	cytosol	57.59	57.59
TraesCS6A01G300400.1	Wheat	golgi, unclear	57.28	57.46
GSMUA_AchrUn_...	Banana	cytosol	24.37	54.23
GSMUA_AchrUn_...	Banana	cytosol	24.05	53.52
Solyc10g044690.1.1	Tomato	cytosol	48.73	48.58
HORVU6Hr1G074440.1	Barley	mitochondrion	58.86	47.94
Zm00001d018090_P002	Maize	plasma membrane	61.08	46.96
Solyc10g047240.1.1	Tomato	cytosol	46.2	45.77
Solyc01g097540.2.1	Tomato	cytosol, nucleus, peroxisome	43.99	43.71
Solyc01g097510.2.1	Tomato	cytosol, nucleus, peroxisome	43.67	43.4
Solyc01g081530.1.1	Tomato	cytosol	32.91	40.94
Solyc01g097520.2.1	Tomato	nucleus	37.34	37.34
Solyc01g097550.2.1	Tomato	cytosol	36.39	36.74
Solyc04g078820.2.1	Tomato	nucleus	36.39	36.39
Solyc04g008270.2.1	Tomato	cytosol	35.76	35.76
OQU93149	Sorghum	plastid	25.0	24.46

Protein Annotations

Gene3D:1.10.220.10	MapMan:35.1	InterPro:Annexin	InterPro:AnnexinD_plant	InterPro:Annexin_repeat	InterPro:Annexin_repeat_CS
InterPro:Annexin_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005544	GO:GO:0008289
InterPro:IPR037104	UniProt:K4BSR4	PFAM:PF00191	PRINTS:PR00196	PRINTS:PR01814	ScanProsite:PS00223
PANTHER:PTHR10502	PANTHER:PTHR10502:SF142	SMART:SM00335	SUPFAM:SSF47874	EnsemblPlantsGene:Solyc04g055170.2	EnsemblPlants:Solyc04g055170.2.1
UniParc:UPI0002765C50	:	:	:	:	:

Description

Annexin [Source:UniProtKB/TrEMBL;Acc:K4BSR4]

Coordinates

chr4:-:53785541..53789376

Molecular Weight (calculated)

36200.8 Da

IEP (calculated)

5.637

GRAVY (calculated)

-0.528

Length

316 amino acids

Sequence
(BLAST)

001: MSSLKVPASV PDPYEDAEQL KKAFKGWGTN EELIIQILAH RNAAQRKLIR DSYAAAYGED LLKDLDSELT SDFQRVVLLW TLSPAERDAY LVNEATKRLT
101: ASNWVIMEIA CTRSSDDLFK ARQAYHARYK KSLEEDVAYH TSGDFRKLLV PLITAFRYEG DEVNMTLARK EANILHEKIS DKAYNDEEII RIISTRSKAQ
201: LSATFNHYND HHGHEIIKDL EADDDDEYLK LLRAAIECLK TPEKHFEKVL RLAIKKLGTD EWDLTRVVAT RAEVDMERIK EEYHRRNSVT LDRAIAGDTS
301: GDYEKMLLAL IGHGDA

Best Arabidopsis Sequence Match ( AT5G65020.1 )
(BLAST)

001: MASLKVPSNV PLPEDDAEQL HKAFSGWGTN EKLIISILAH RNAAQRSLIR SVYAATYNED LLKALDKELS SDFERAVMLW TLDPPERDAY LAKESTKMFT
101: KNNWVLVEIA CTRPALELIK VKQAYQARYK KSIEEDVAQH TSGDLRKLLL PLVSTFRYEG DDVNMMLARS EAKILHEKVS EKSYSDDDFI RILTTRSKAQ
201: LGATLNHYNN EYGNAINKNL KEESDDNDYM KLLRAVITCL TYPEKHFEKV LRLSINKMGT DEWGLTRVVT TRTEVDMERI KEEYQRRNSI PLDRAIAKDT
301: SGDYEDMLVA LLGHGDA

Arabidopsis Description

ANN2Annexin D2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEE2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.