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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH43188 Soybean endoplasmic reticulum 96.83 96.83
CDY71429 Canola cytosol 54.6 75.11
CDY33992 Canola cytosol 74.92 74.68
Bra031890.1-P Field mustard cytosol 74.6 74.37
Bra024346.1-P Field mustard cytosol 73.65 73.42
CDY14530 Canola cytosol 73.65 73.42
Solyc04g055170.2.1 Tomato plastid 73.02 72.78
PGSC0003DMT400004741 Potato cytosol, mitochondrion 73.02 72.56
CDX96984 Canola cytosol 73.02 72.33
AT5G65020.1 Thale cress cytosol 72.7 72.24
AT5G10230.1 Thale cress cytosol 72.38 72.15
CDX69853 Canola cytosol 72.7 72.01
Bra009049.1-P Field mustard cytosol 72.7 72.01
KRH18900 Soybean endoplasmic reticulum 71.43 71.2
CDX69852 Canola cytosol 70.79 70.57
Bra009048.1-P Field mustard cytosol 70.79 70.57
AT5G10220.1 Thale cress cytosol 71.11 70.44
CDY08828 Canola cytosol 52.38 69.62
EER88097 Sorghum cytosol 66.67 66.88
CDX96985 Canola cytosol 44.76 66.82
GSMUA_Achr8P17240_001 Banana cytosol 66.35 66.14
TraesCS7D01G181600.1 Wheat cytosol, golgi, unclear 65.08 65.29
TraesCS7B01G085300.1 Wheat cytosol 58.41 64.79
TraesCS7A01G180100.1 Wheat cytosol, golgi, unclear 64.13 64.33
GSMUA_Achr9P14750_001 Banana cytosol 64.44 64.24
HORVU7Hr1G037080.3 Barley cytosol 64.13 64.13
EES05513 Sorghum cytosol 63.49 63.69
Os02t0753800-01 Rice cytosol, plasma membrane 62.54 62.74
Os06t0221200-01 Rice plasma membrane, plastid 62.86 62.46
GSMUA_Achr10P... Banana cytosol 62.54 62.34
PGSC0003DMT400056154 Potato cytosol 62.22 62.22
TraesCS6A01G300400.1 Wheat golgi, unclear 60.32 60.32
Zm00001d037211_P001 Maize mitochondrion 65.08 60.29
TraesCS6D01G280300.1 Wheat cytosol, golgi, unclear 59.68 59.68
KRH54748 Soybean endoplasmic reticulum 33.33 59.66
Solyc05g051980.2.1 Tomato cytosol 65.4 59.37
TraesCS6B01G330100.1 Wheat cytosol 59.37 59.37
GSMUA_AchrUn_... Banana cytosol 24.76 54.93
GSMUA_AchrUn_... Banana cytosol 24.76 54.93
KRH20773 Soybean nucleus 54.29 54.46
KRH13419 Soybean nucleus 53.65 53.82
KRH62894 Soybean cytosol 53.02 53.18
KRH20777 Soybean nucleus 52.38 52.72
KRH13429 Soybean cytosol 48.25 51.35
KRH30022 Soybean endoplasmic reticulum, nucleus 50.79 51.28
KRH11860 Soybean cytosol 50.48 50.8
KRH36874 Soybean cytosol 50.48 50.64
KRH20779 Soybean cytosol, endoplasmic reticulum 46.35 49.66
HORVU6Hr1G074440.1 Barley mitochondrion 60.63 49.23
Zm00001d018090_P002 Maize plasma membrane 62.22 47.69
KRH30018 Soybean cytosol 34.92 45.27
KRH20782 Soybean cytosol 45.71 45.0
KRH13434 Soybean cytosol 45.4 44.69
KRH13430 Soybean mitochondrion 18.1 40.43
KRH49730 Soybean cytosol 30.79 39.92
KRH41882 Soybean cytosol 39.05 39.05
KRH39009 Soybean cytosol, endoplasmic reticulum, nucleus 39.05 38.8
KRH48709 Soybean endoplasmic reticulum, nucleus 38.73 38.49
KRH60582 Soybean cytosol 24.44 38.12
KRH13431 Soybean cytosol, nucleus 36.83 36.94
KRH20781 Soybean cytosol 36.51 36.62
KRG89259 Soybean cytosol 32.7 35.52
KRH20641 Soybean cytosol 29.52 25.69
OQU93149 Sorghum plastid 26.03 25.39
Protein Annotations
Gene3D:1.10.220.10EntrezGene:100796047MapMan:35.1UniProt:A0A0R0JX95EMBL:ACUP02003316InterPro:Annexin
InterPro:AnnexinD_plantInterPro:Annexin_repeatInterPro:Annexin_repeat_CSInterPro:Annexin_sfncoils:CoilEnsemblPlantsGene:GLYMA_05G178700
GO:GO:0003674GO:GO:0005488GO:GO:0005509GO:GO:0005544GO:GO:0008289InterPro:IPR037104
EnsemblPlants:KRH59342ProteinID:KRH59342ProteinID:KRH59342.1PFAM:PF00191PRINTS:PR00196PRINTS:PR01814
ScanProsite:PS00223PANTHER:PTHR10502PANTHER:PTHR10502:SF98SMART:SM00335SUPFAM:SSF47874UniParc:UPI0001B63CD1
Description
hypothetical protein
Coordinates
chr5:+:36671930..36675451
Molecular Weight (calculated)
35647.5 Da
IEP (calculated)
6.091
GRAVY (calculated)
-0.429
Length
315 amino acids
Sequence
(BLAST)
001: MATLKVPAQL PSPVEDSEQL RKAFQGWGTN EGLIISILGH RNAAQRKLIR EAYSATHGED LFKDLDKELS SDFERAVLVW TLDPAERDAF LANEATKMLT
101: SNNWVILEIA STRSSLDLLK AKQAYQARFK KSLEEDVAYH TKGDIRKLLV PLVSIFRYEG DEVNMTLAKS EAKLLHEKIA EKAYNDEELI RILSTRSKAQ
201: LTATLNQYNN EFGNAINKDL KTDPKDEYLQ LLRAAIKCLT YPEKYFAKVL RMAINKLGTD EGALTRVVTT RAEVDLQRIA EEYQRRNSIP LDRAIANDTS
301: GDYQSILLAL VGHED
Best Arabidopsis Sequence Match ( AT5G65020.1 )
(BLAST)
001: MASLKVPSNV PLPEDDAEQL HKAFSGWGTN EKLIISILAH RNAAQRSLIR SVYAATYNED LLKALDKELS SDFERAVMLW TLDPPERDAY LAKESTKMFT
101: KNNWVLVEIA CTRPALELIK VKQAYQARYK KSIEEDVAQH TSGDLRKLLL PLVSTFRYEG DDVNMMLARS EAKILHEKVS EKSYSDDDFI RILTTRSKAQ
201: LGATLNHYNN EYGNAINKNL KEESDDNDYM KLLRAVITCL TYPEKHFEKV LRLSINKMGT DEWGLTRVVT TRTEVDMERI KEEYQRRNSI PLDRAIAKDT
301: SGDYEDMLVA LLGHGDA
Arabidopsis Description
ANN2Annexin D2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEE2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.