CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20773	Soybean	nucleus	97.77	97.77
KRH30022	Soybean	endoplasmic reticulum, nucleus	79.94	80.45
KRH20777	Soybean	nucleus	76.43	76.68
KRH13429	Soybean	cytosol	71.34	75.68
KRH62894	Soybean	cytosol	71.97	71.97
KRH20779	Soybean	cytosol, endoplasmic reticulum	66.56	71.09
KRH30018	Soybean	cytosol	49.68	64.2
PGSC0003DMT400042972	Potato	cytosol	30.25	63.33
Solyc10g047240.1.1	Tomato	cytosol	60.51	59.56
Solyc10g044690.1.1	Tomato	cytosol	59.87	59.31
PGSC0003DMT400019344	Potato	cytosol	58.28	59.22
GSMUA_Achr4P00360_001	Banana	cytosol	57.32	58.82
TraesCS2D01G370100.1	Wheat	cytosol	57.64	57.1
KRH13430	Soybean	mitochondrion	25.48	56.74
TraesCS2B01G391000.1	Wheat	cytosol	56.05	55.52
Os01t0497400-00	Rice	cytosol	38.85	54.71
GSMUA_Achr8P17430_001	Banana	cytosol	53.18	54.58
HORVU2Hr1G090920.1	Barley	cytosol	50.0	54.14
KRH59342	Soybean	endoplasmic reticulum	53.82	53.65
KRH43188	Soybean	endoplasmic reticulum	52.87	52.7
EES00261	Sorghum	cytosol	54.78	52.6
TraesCS2A01G373800.1	Wheat	mitochondrion	55.41	52.41
KRH11860	Soybean	cytosol	51.59	51.76
KRH36874	Soybean	cytosol	50.64	50.64
KRH18900	Soybean	endoplasmic reticulum	50.32	50.0
Zm00001d008664_P001	Maize	cytosol	49.68	49.68
Zm00001d039739_P001	Maize	cytosol	53.18	47.99
KRH54748	Soybean	endoplasmic reticulum	24.52	43.75
KRH20782	Soybean	cytosol	43.31	42.5
KRH13434	Soybean	cytosol	42.99	42.19
KRH49730	Soybean	cytosol	30.57	39.51
KRH48709	Soybean	endoplasmic reticulum, nucleus	38.85	38.49
KRH39009	Soybean	cytosol, endoplasmic reticulum, nucleus	38.85	38.49
KRH41882	Soybean	cytosol	38.53	38.41
KRH13431	Soybean	cytosol, nucleus	36.62	36.62
KRH20781	Soybean	cytosol	36.31	36.31
KRG89259	Soybean	cytosol	33.44	36.21
KRH60582	Soybean	cytosol	22.61	35.15
KRH20641	Soybean	cytosol	28.66	24.86

Protein Annotations

Gene3D:1.10.220.10	EntrezGene:100794511	MapMan:35.1	EMBL:ACUP02009717	InterPro:Annexin	InterPro:AnnexinD_plant
InterPro:Annexin_repeat	InterPro:Annexin_repeat_CS	InterPro:Annexin_sf	EnsemblPlantsGene:GLYMA_15G237800	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	GO:GO:0005544	GO:GO:0008289	UniProt:I1MIT6	InterPro:IPR037104	EnsemblPlants:KRH13419
ProteinID:KRH13419	ProteinID:KRH13419.1	PFAM:PF00191	PRINTS:PR00196	PRINTS:PR01814	ScanProsite:PS00223
PANTHER:PTHR10502	PANTHER:PTHR10502:SF172	SMART:SM00335	SUPFAM:SSF47874	UniParc:UPI000211DABB	:

Description

hypothetical protein

Coordinates

chr15:+:44829371..44832483

Molecular Weight (calculated)

35817.8 Da

IEP (calculated)

8.840

GRAVY (calculated)

-0.517

Length

314 amino acids

Sequence
(BLAST)

001: MATLIAPITF SPGLDAEALR KAFQGWGTDE KTVIAILGHR NVHQRQQIRK IYEEIYQEDL IKRLESELSG DFERAVYRWM LEPADRDAVL ANVAIKNGSK
101: GYHVIVEIAC VLSAEEVLAV KRAYHNRYKR SLEEDVATNT TGDIRQLLVG LVTAYRYGGD EINAKLAKTE ADILHESIKE KKGNHEEAIR ILTTRSKTQL
201: LATFNRYRDD HGASITKKLL DNASTDFQKA LHTAIRCIND HKKYYEKVLR NALKNVGTDE DALTRVVVSR AEKDLRDIKE RYYKRNSVHL EDAVAKEISG
301: DYKKFILTLL GKED

Best Arabidopsis Sequence Match ( AT1G35720.1 )
(BLAST)

001: MATLKVSDSV PAPSDDAEQL RTAFEGWGTN EDLIISILAH RSAEQRKVIR QAYHETYGED LLKTLDKELS NDFERAILLW TLEPGERDAL LANEATKRWT
101: SSNQVLMEVA CTRTSTQLLH ARQAYHARYK KSLEEDVAHH TTGDFRKLLV SLVTSYRYEG DEVNMTLAKQ EAKLVHEKIK DKHYNDEDVI RILSTRSKAQ
201: INATFNRYQD DHGEEILKSL EEGDDDDKFL ALLRSTIQCL TRPELYFVDV LRSAINKTGT DEGALTRIVT TRAEIDLKVI GEEYQRRNSI PLEKAITKDT
301: RGDYEKMLVA LLGEDDA

Arabidopsis Description

ANN1Annexin [Source:UniProtKB/TrEMBL;Acc:A0A178WGZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.