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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218
nucleus: 27291164
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 23041469 doi
S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH54748 Soybean endoplasmic reticulum 45.25 81.25
VIT_18s0001g05530.t01 Wine grape cytosol 76.9 78.64
Solyc04g073990.2.1 Tomato plastid 71.84 72.29
KRH43188 Soybean endoplasmic reticulum 71.52 71.75
KRH59342 Soybean endoplasmic reticulum 71.2 71.43
PGSC0003DMT400045665 Potato cytosol, extracellular 70.89 71.34
AT1G35720.1 Thale cress cytosol 71.52 71.29
CDY37093 Canola cytosol 70.89 70.66
CDX73353 Canola cytosol 70.89 70.66
CDY41873 Canola cytosol 69.94 69.72
Bra036764.1-P Field mustard cytosol 69.62 69.4
Bra034402.1-P Field mustard cytosol 70.89 68.92
CDX91750 Canola cytosol 68.99 68.77
EER88097 Sorghum cytosol 67.41 67.83
TraesCS7B01G085300.1 Wheat cytosol 60.76 67.61
HORVU7Hr1G037080.3 Barley cytosol 67.09 67.3
TraesCS7D01G181600.1 Wheat cytosol, golgi, unclear 66.77 67.2
GSMUA_Achr8P17240_001 Banana cytosol 66.77 66.77
Os06t0221200-01 Rice plasma membrane, plastid 66.14 65.93
TraesCS7A01G180100.1 Wheat cytosol, golgi, unclear 65.51 65.92
EES05513 Sorghum cytosol 65.51 65.92
GSMUA_Achr9P14750_001 Banana cytosol 65.51 65.51
Os02t0753800-01 Rice cytosol, plasma membrane 64.56 64.97
TraesCS6A01G300400.1 Wheat golgi, unclear 63.29 63.49
TraesCS6D01G280300.1 Wheat cytosol, golgi, unclear 62.66 62.86
Bra039578.1-P Field mustard cytosol, endoplasmic reticulum, plastid 52.22 62.26
TraesCS6B01G330100.1 Wheat cytosol 62.03 62.22
GSMUA_Achr10P... Banana cytosol 62.03 62.03
Zm00001d037211_P001 Maize mitochondrion 66.46 61.76
CDY03132 Canola cytosol 40.19 58.26
HORVU6Hr1G074440.1 Barley mitochondrion 63.29 51.55
GSMUA_AchrUn_... Banana cytosol 23.1 51.41
GSMUA_AchrUn_... Banana cytosol 23.1 51.41
KRH20773 Soybean nucleus 50.32 50.64
KRH13419 Soybean nucleus 50.0 50.32
KRH62894 Soybean cytosol 49.68 50.0
KRH13429 Soybean cytosol 46.84 50.0
Zm00001d018090_P002 Maize plasma membrane 64.87 49.88
KRH20777 Soybean nucleus 48.73 49.2
KRH30022 Soybean endoplasmic reticulum, nucleus 48.42 49.04
KRH20779 Soybean cytosol, endoplasmic reticulum 43.99 47.28
KRH11860 Soybean cytosol 45.89 46.33
KRH36874 Soybean cytosol 45.25 45.54
KRH30018 Soybean cytosol 34.81 45.27
KRH20782 Soybean cytosol 43.99 43.44
KRH13434 Soybean cytosol 43.99 43.44
KRH20781 Soybean cytosol 38.61 38.85
KRH13431 Soybean cytosol, nucleus 38.29 38.53
KRH13430 Soybean mitochondrion 16.77 37.59
KRH49730 Soybean cytosol 28.48 37.04
KRH41882 Soybean cytosol 36.39 36.51
KRH60582 Soybean cytosol 23.1 36.14
KRH48709 Soybean endoplasmic reticulum, nucleus 36.08 35.96
KRH39009 Soybean cytosol, endoplasmic reticulum, nucleus 35.76 35.65
KRG89259 Soybean cytosol 32.28 35.17
OQU93149 Sorghum plastid 27.53 26.93
KRH20641 Soybean cytosol 28.48 24.86
Protein Annotations
Gene3D:1.10.220.10EntrezGene:100784252MapMan:35.1EMBL:ACUP02008146InterPro:AnnexinInterPro:AnnexinD_plant
InterPro:Annexin_repeatInterPro:Annexin_repeat_CSInterPro:Annexin_sfUniProt:G3E7M9EnsemblPlantsGene:GLYMA_13G088700GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005507GO:GO:0005509
GO:GO:0005515GO:GO:0005524GO:GO:0005544GO:GO:0005575GO:GO:0005576GO:GO:0005618
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005773GO:GO:0005774
GO:GO:0005829GO:GO:0005886GO:GO:0006810GO:GO:0006950GO:GO:0006970GO:GO:0008150
GO:GO:0008270GO:GO:0008289GO:GO:0009408GO:GO:0009409GO:GO:0009414GO:GO:0009506
GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009579GO:GO:0009628GO:GO:0009651
GO:GO:0009719GO:GO:0009737GO:GO:0009987GO:GO:0016020GO:GO:0030312GO:GO:0042803
GO:GO:0046686GO:GO:0048046GO:GO:0070588GO:GO:0071435GO:GO:0098869EMBL:HQ636612
InterPro:IPR037104EnsemblPlants:KRH18900ProteinID:KRH18900ProteinID:KRH18900.1PFAM:PF00191PRINTS:PR00196
PRINTS:PR01814ScanProsite:PS00223PANTHER:PTHR10502PANTHER:PTHR10502:SF98SMART:SM00335SUPFAM:SSF47874
UniParc:UPI000189D84B:::::
Description
hypothetical protein
Coordinates
chr13:-:20296948..20300209
Molecular Weight (calculated)
35924.7 Da
IEP (calculated)
6.960
GRAVY (calculated)
-0.466
Length
316 amino acids
Sequence
(BLAST)
001: MATLKVPQPL PPVADDCEQL RKAFSGWGTN EELIVSILAH RNAAQRKLIR ETYAQTYGED LLKALDKELT SDFERLVHLW TLDSAERDAF LANEATKKWT
101: SSNQVLVEIA CTRSSEQLFA ARKAYHVLYK KSLEEDVAHH TTGDFRKLIL PLVSSYRYEG DEVNLTLAKT EAKLLHEKIS NKAYNDDDFI RILATRSRAQ
201: INATLNHYKD AFGQDINKDL KADPKDEFLS LLRATVKCLI RPEKYFEKVV RLAINKRGTD EGALTRVVAT RAEVDLKNIA DEYQRRSSVP LERAIVKDTT
301: GDYEKMLVAL LGHDDA
Best Arabidopsis Sequence Match ( AT1G35720.1 )
(BLAST)
001: MATLKVSDSV PAPSDDAEQL RTAFEGWGTN EDLIISILAH RSAEQRKVIR QAYHETYGED LLKTLDKELS NDFERAILLW TLEPGERDAL LANEATKRWT
101: SSNQVLMEVA CTRTSTQLLH ARQAYHARYK KSLEEDVAHH TTGDFRKLLV SLVTSYRYEG DEVNMTLAKQ EAKLVHEKIK DKHYNDEDVI RILSTRSKAQ
201: INATFNRYQD DHGEEILKSL EEGDDDDKFL ALLRSTIQCL TRPELYFVDV LRSAINKTGT DEGALTRIVT TRAEIDLKVI GEEYQRRNSI PLEKAITKDT
301: RGDYEKMLVA LLGEDDA
Arabidopsis Description
ANN1Annexin [Source:UniProtKB/TrEMBL;Acc:A0A178WGZ8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.