CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
vacuole 1
cytosol 3
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13419	Soybean	nucleus	97.77	97.77
KRH30022	Soybean	endoplasmic reticulum, nucleus	79.62	80.13
KRH20777	Soybean	nucleus	76.43	76.68
KRH13429	Soybean	cytosol	71.34	75.68
KRH20779	Soybean	cytosol, endoplasmic reticulum	67.2	71.77
KRH62894	Soybean	cytosol	71.02	71.02
PGSC0003DMT400042972	Potato	cytosol	30.25	63.33
KRH30018	Soybean	cytosol	48.73	62.96
Solyc10g047240.1.1	Tomato	cytosol	60.19	59.25
PGSC0003DMT400019344	Potato	cytosol	58.28	59.22
Solyc10g044690.1.1	Tomato	cytosol	59.55	58.99
KRH13430	Soybean	mitochondrion	26.43	58.87
GSMUA_Achr4P00360_001	Banana	cytosol	56.37	57.84
TraesCS2D01G370100.1	Wheat	cytosol	58.28	57.73
TraesCS2B01G391000.1	Wheat	cytosol	56.69	56.15
Os01t0497400-00	Rice	cytosol	39.49	55.61
GSMUA_Achr8P17430_001	Banana	cytosol	53.5	54.9
HORVU2Hr1G090920.1	Barley	cytosol	50.64	54.83
KRH59342	Soybean	endoplasmic reticulum	54.46	54.29
KRH43188	Soybean	endoplasmic reticulum	53.5	53.33
EES00261	Sorghum	cytosol	55.41	53.21
TraesCS2A01G373800.1	Wheat	mitochondrion	56.05	53.01
KRH11860	Soybean	cytosol	51.59	51.76
KRH36874	Soybean	cytosol	50.64	50.64
Zm00001d008664_P001	Maize	cytosol	50.32	50.32
KRH18900	Soybean	endoplasmic reticulum	50.64	50.32
Zm00001d039739_P001	Maize	cytosol	53.82	48.56
KRH54748	Soybean	endoplasmic reticulum	25.16	44.89
KRH20782	Soybean	cytosol	44.59	43.75
KRH13434	Soybean	cytosol	44.27	43.44
KRH49730	Soybean	cytosol	30.89	39.92
KRH48709	Soybean	endoplasmic reticulum, nucleus	39.49	39.12
KRH39009	Soybean	cytosol, endoplasmic reticulum, nucleus	39.49	39.12
KRH41882	Soybean	cytosol	39.17	39.05
KRG89259	Soybean	cytosol	33.76	36.55
KRH13431	Soybean	cytosol, nucleus	36.31	36.31
KRH60582	Soybean	cytosol	23.25	36.14
KRH20781	Soybean	cytosol	35.99	35.99
KRH20641	Soybean	cytosol	29.3	25.41

Protein Annotations

Gene3D:1.10.220.10	EntrezGene:100782110	MapMan:35.1	UniProt:A0A0R0H0L0	EMBL:ACUP02008303	InterPro:Annexin
InterPro:AnnexinD_plant	InterPro:Annexin_repeat	InterPro:Annexin_repeat_CS	InterPro:Annexin_sf	EnsemblPlantsGene:GLYMA_13G199500	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005544	GO:GO:0008289	InterPro:IPR037104	EnsemblPlants:KRH20773
ProteinID:KRH20773	ProteinID:KRH20773.1	PFAM:PF00191	PRINTS:PR00196	PRINTS:PR01814	ScanProsite:PS00223
PANTHER:PTHR10502	PANTHER:PTHR10502:SF172	SMART:SM00335	SUPFAM:SSF47874	UniParc:UPI000189D882	:

Description

hypothetical protein

Coordinates

chr13:+:31331868..31335238

Molecular Weight (calculated)

35733.6 Da

IEP (calculated)

8.200

GRAVY (calculated)

-0.490

Length

314 amino acids

Sequence
(BLAST)

001: MATLIAPITF SPGLDAEALR KAFQGWGTDE KTVIAILGHR NVHQRQQIRK VYEEIYQEDL IKRLESELSG DFERAVYRWM LEPADRDAVL ANVAIKNGSK
101: GYHVIVEIAC VLSADEVLAV KRAYHNRYKR SLEEDVATNT TGDIRQLLVG LVTAYRYDGD EVNAKLAKTE ADILHESIKE KKGNHEEAIR ILTTRSKTQL
201: LATFNRYRDD HGASITKKLL DNASTDFQKA LHTAIRCIND HKKYYEKVLR NAIKGVGTDE DALTRVVVSR AEKDLRDIKE LYYKRNSVHL EDAVAKEISG
301: DYKKFILTLL GKED

Best Arabidopsis Sequence Match ( AT5G12380.1 )
(BLAST)

001: MATIVSPPHF SPVEDAENIK AACQGWGTNE NAIISILGHR NLFQRKLIRQ AYQEIYHEDL IHQLKSELSG NFERAICLWV LDPPERDALL ANLALQKPIP
101: DYKVLVEIAC MRSPEDMLAA RRAYRCLYKH SLEEDLASRT IGDIRRLLVA MVSAYKYDGE EIDEMLAQSE AAILHDEILG KAVDHEETIR VLSTRSSMQL
201: SAIFNRYKDI YGTSITKDLL NHPTNEYLSA LRAAIRCIKN PTRYYAKVLR NSINTVGTDE DALNRVIVTR AEKDLTNITG LYFKRNNVSL DQAIAKETSG
301: DYKAFLLALL GHGKQL

Arabidopsis Description

ANNAT8Annexin [Source:UniProtKB/TrEMBL;Acc:X5JAK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.