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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 endoplasmic reticulum: 27224218
nucleus: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH48709 Soybean endoplasmic reticulum, nucleus 96.85 96.85
KRH41882 Soybean cytosol 81.39 81.9
KRH60582 Soybean cytosol 45.43 71.29
Os09t0394900-01 Rice plasma membrane 68.45 68.89
TraesCS5B01G201700.2 Wheat cytosol 68.45 68.89
HORVU5Hr1G060250.1 Barley cytosol 67.82 68.25
Zm00001d020381_P001 Maize cytosol, extracellular, mitochondrion 67.51 67.72
Zm00001d005713_P001 Maize mitochondrion 67.51 67.72
EER96704 Sorghum cytosol 66.88 67.09
TraesCS3B01G531500.1 Wheat cytosol, plastid 65.3 65.51
KRH49730 Soybean cytosol 50.16 65.43
TraesCS3D01G479100.1 Wheat cytosol, plastid 64.98 65.19
TraesCS5D01G209400.2 Wheat cytosol 67.82 63.42
HORVU1Hr1G016080.6 Barley cytosol 62.78 62.78
KRG89259 Soybean cytosol 56.78 62.07
TraesCS1A01G073900.1 Wheat cytosol 61.51 61.71
TraesCS1D01G076600.1 Wheat cytosol 61.2 61.39
Os08t0425700-01 Rice cytosol 62.15 61.37
TraesCS1B01G092400.1 Wheat cytosol 50.16 60.0
Zm00001d050346_P001 Maize cytosol 59.94 59.94
EES13861 Sorghum cytosol 60.25 59.69
HORVU3Hr1G105860.1 Barley mitochondrion 64.04 59.01
TraesCS5A01G203000.1 Wheat cytosol 69.09 57.03
TraesCS3A01G484400.1 Wheat plastid 64.67 54.96
HORVU1Hr1G015920.1 Barley cytosol 28.08 51.74
KRH20773 Soybean nucleus 39.12 39.49
KRH30022 Soybean endoplasmic reticulum, nucleus 38.49 39.1
KRH59342 Soybean endoplasmic reticulum 38.8 39.05
KRH13419 Soybean nucleus 38.49 38.85
KRH43188 Soybean endoplasmic reticulum 38.49 38.73
KRH62894 Soybean cytosol 38.17 38.53
KRH13434 Soybean cytosol 38.17 37.81
KRH20782 Soybean cytosol 37.85 37.5
KRH20777 Soybean nucleus 36.59 37.06
KRH11860 Soybean cytosol 36.28 36.74
KRH20779 Soybean cytosol, endoplasmic reticulum 33.44 36.05
KRH18900 Soybean endoplasmic reticulum 35.65 35.76
KRH13429 Soybean cytosol 33.12 35.47
KRH13430 Soybean mitochondrion 15.46 34.75
KRH36874 Soybean cytosol 33.44 33.76
KRH30018 Soybean cytosol 24.61 32.1
KRH13431 Soybean cytosol, nucleus 29.34 29.62
KRH20781 Soybean cytosol 29.34 29.62
KRH54748 Soybean endoplasmic reticulum 16.4 29.55
KRH20641 Soybean cytosol 28.39 24.86
Protein Annotations
Gene3D:1.10.220.10MapMan:35.1UniProt:A0A0R0I9M4EMBL:ACUP02005905InterPro:AnnexinInterPro:Annexin_repeat
InterPro:Annexin_repeat_CSInterPro:Annexin_sfEnsemblPlantsGene:GLYMA_09G171600GO:GO:0003674GO:GO:0005488GO:GO:0005509
GO:GO:0005544GO:GO:0008289InterPro:IPR037104ProteinID:KRH39008.1EnsemblPlants:KRH39009ProteinID:KRH39009
ProteinID:KRH39009.1PFAM:PF00191PRINTS:PR00196ScanProsite:PS00223PANTHER:PTHR10502PANTHER:PTHR10502:SF120
SMART:SM00335SUPFAM:SSF47874UniParc:UPI000189D87D:::
Description
hypothetical protein
Coordinates
chr9:-:39644446..39648832
Molecular Weight (calculated)
35508.5 Da
IEP (calculated)
9.085
GRAVY (calculated)
-0.408
Length
317 amino acids
Sequence
(BLAST)
001: MATLTVPPVP PSPRDDAMQL YRAFKGFGCD TSAVINILAH RDATQRAYIQ QEYKAMYSEE LSKRLASELS GKLETAVLLW LHDPAGRDAT IIRKSLTADN
101: KTLEGATEVI CSRTPSQLQY LKQIYHSMFG VYLEHDIQTN TSPGDHQKLL LAYISTPRHE GPEVNREIAQ KDAKGLYKAG EKKLGTDEKT FIHIFSERSA
201: AHLAAVSSYY HDMYGHSLKK AVKNETSGAF EHALLTIIQC AVNPGKYFAK VLHKAMKGLG TDDSTLIRVV VTRTEVDMQY IKAAYLKKHK KTLNDEVHSE
301: TSSHYRTFLL SLLGPNH
Best Arabidopsis Sequence Match ( AT1G68090.1 )
(BLAST)
001: MATMKIPMTV PSPRVDADQL FKAFKGRGCD TSVIINILAH RNATQRALIE QEYETKFSDD LRKRLHSELH GHLKKAVLLW MPEAVERDAS ILKRSLRGAV
101: TDHKAIAEII CTRSGSQLRQ IKQVYSNTFG VKLEEDIESE ASGNHKRVLL AYLNTTRYEG PEIDNASVEN DARTLKSAVA RKHKSDDQTL IQIFTDRSRT
201: HLVAVRSTYR SMYGKELGKA IRDETRGNFE HVLLTILQCA ENSCFYFAKA LRKSMKGLGT DDTALIRIVV TRAEVDMQFI ITEYRKRYKK TLYNAVHSDT
301: TSHYRTFLLS LLGPNV
Arabidopsis Description
ANN5Annexin D5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.