Skip to main content
crop-pal logo
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, nucleus

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
endoplasmic reticulum: 27224218
nucleus: 27291164
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH13419 Soybean nucleus 80.45 79.94
KRH20773 Soybean nucleus 80.13 79.62
KRH62894 Soybean cytosol 73.4 72.93
KRH20777 Soybean nucleus 73.08 72.84
KRH13429 Soybean cytosol 68.91 72.64
KRH20779 Soybean cytosol, endoplasmic reticulum 66.03 70.07
KRH30018 Soybean cytosol 50.0 64.2
PGSC0003DMT400042972 Potato cytosol 29.49 61.33
PGSC0003DMT400019344 Potato cytosol 57.05 57.61
Solyc10g044690.1.1 Tomato cytosol 58.33 57.41
Solyc10g047240.1.1 Tomato cytosol 58.33 57.05
KRH13430 Soybean mitochondrion 25.64 56.74
GSMUA_Achr4P00360_001 Banana cytosol 54.17 55.23
GSMUA_Achr8P17430_001 Banana cytosol 53.21 54.25
Os01t0497400-00 Rice cytosol 38.46 53.81
TraesCS2D01G370100.1 Wheat cytosol 54.17 53.31
TraesCS2B01G391000.1 Wheat cytosol 53.85 53.0
KRH11860 Soybean cytosol 51.28 51.12
HORVU2Hr1G090920.1 Barley cytosol 47.44 51.03
KRH59342 Soybean endoplasmic reticulum 51.28 50.79
TraesCS2A01G373800.1 Wheat mitochondrion 53.21 50.0
KRH43188 Soybean endoplasmic reticulum 50.0 49.52
KRH36874 Soybean cytosol 49.36 49.04
KRH18900 Soybean endoplasmic reticulum 49.04 48.42
EES00261 Sorghum cytosol 50.0 47.71
Zm00001d008664_P001 Maize cytosol 45.83 45.54
Zm00001d039739_P001 Maize cytosol 50.32 45.11
KRH54748 Soybean endoplasmic reticulum 24.04 42.61
KRH20782 Soybean cytosol 43.59 42.5
KRH13434 Soybean cytosol 42.95 41.88
KRH49730 Soybean cytosol 31.41 40.33
KRH48709 Soybean endoplasmic reticulum, nucleus 39.74 39.12
KRH41882 Soybean cytosol 39.42 39.05
KRH39009 Soybean cytosol, endoplasmic reticulum, nucleus 39.1 38.49
KRG89259 Soybean cytosol 34.94 37.59
KRH20781 Soybean cytosol 36.54 36.31
KRH13431 Soybean cytosol, nucleus 35.9 35.67
KRH60582 Soybean cytosol 22.44 34.65
KRH20641 Soybean cytosol 27.24 23.48
Protein Annotations
Gene3D:1.10.220.10EntrezGene:100806472MapMan:35.1EMBL:ACUP02006840InterPro:AnnexinInterPro:AnnexinD_plant
InterPro:Annexin_repeatInterPro:Annexin_repeat_CSInterPro:Annexin_sfEnsemblPlantsGene:GLYMA_11G153800GO:GO:0003674GO:GO:0005488
GO:GO:0005509GO:GO:0005544GO:GO:0008289UniProt:I1LLC0InterPro:IPR037104EnsemblPlants:KRH30022
ProteinID:KRH30022ProteinID:KRH30022.1PFAM:PF00191PRINTS:PR00196PRINTS:PR01814ScanProsite:PS00223
PANTHER:PTHR10502PANTHER:PTHR10502:SF172SMART:SM00335SUPFAM:SSF47874UniParc:UPI0002965E53:
Description
hypothetical protein
Coordinates
chr11:-:12378018..12383408
Molecular Weight (calculated)
35955.8 Da
IEP (calculated)
8.414
GRAVY (calculated)
-0.577
Length
312 amino acids
Sequence
(BLAST)
001: MATLIAPSHH SRVEDAEALR NAFKGWGADD KAIIAILGHR NVHQRQEIRK AYEEIYQEDL IKRLESEISG DFERAMYRWM LQPADRDAVL VNVAIKNGTK
101: DYHVIAEIAC VLSAEELLAV RRAYHRRYKC SLEEDVAANT TGNLRQLLVG LVTSYRYEGD EINVKFSQTE ANVLHESVKE KKGNSEEVIR ILTTRSKTQL
201: VATFNRYRDE HGISISKKLL DQTSDDFHKV LHTAIRCIND HKKYYEKVLR NAVKKFGTDE DGLSRVIVTR AEKDLKDIKE LYYKRNSVHL EDEVSKETSG
301: DYKKFLLTLL GK
Best Arabidopsis Sequence Match ( AT1G35720.1 )
(BLAST)
001: MATLKVSDSV PAPSDDAEQL RTAFEGWGTN EDLIISILAH RSAEQRKVIR QAYHETYGED LLKTLDKELS NDFERAILLW TLEPGERDAL LANEATKRWT
101: SSNQVLMEVA CTRTSTQLLH ARQAYHARYK KSLEEDVAHH TTGDFRKLLV SLVTSYRYEG DEVNMTLAKQ EAKLVHEKIK DKHYNDEDVI RILSTRSKAQ
201: INATFNRYQD DHGEEILKSL EEGDDDDKFL ALLRSTIQCL TRPELYFVDV LRSAINKTGT DEGALTRIVT TRAEIDLKVI GEEYQRRNSI PLEKAITKDT
301: RGDYEKMLVA LLGEDDA
Arabidopsis Description
ANN1Annexin [Source:UniProtKB/TrEMBL;Acc:A0A178WGZ8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.