Factsheet for TraesCS6D01G280300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear, cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, unclear
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G300400.1	Wheat	golgi, unclear	98.41	98.41
TraesCS6B01G330100.1	Wheat	cytosol	97.78	97.78
Os02t0753800-01	Rice	cytosol, plasma membrane	87.3	87.58
EES05513	Sorghum	cytosol	86.35	86.62
TraesCS7D01G181600.1	Wheat	cytosol, golgi, unclear	79.37	79.62
HORVU6Hr1G074440.1	Barley	mitochondrion	93.65	76.03
GSMUA_Achr8P17240_001	Banana	cytosol	68.25	68.04
Zm00001d018090_P002	Maize	plasma membrane	86.67	66.42
GSMUA_Achr10P...	Banana	cytosol	63.17	62.97
KRH18900	Soybean	endoplasmic reticulum	62.86	62.66
Bra031890.1-P	Field mustard	cytosol	60.95	60.76
CDY33992	Canola	cytosol	60.95	60.76
KRH59342	Soybean	endoplasmic reticulum	59.68	59.68
KRH43188	Soybean	endoplasmic reticulum	59.68	59.68
Solyc04g073990.2.1	Tomato	plastid	59.37	59.55
AT5G10230.1	Thale cress	cytosol	59.68	59.49
CDY14530	Canola	cytosol	59.05	58.86
Bra024346.1-P	Field mustard	cytosol	59.05	58.86
PGSC0003DMT400045665	Potato	cytosol, extracellular	58.41	58.6
CDY71429	Canola	cytosol	42.54	58.52
CDX96984	Canola	cytosol	58.73	58.18
Bra009048.1-P	Field mustard	cytosol	57.78	57.59
Solyc04g055170.2.1	Tomato	plastid	57.78	57.59
CDX69852	Canola	cytosol	57.78	57.59
Bra009049.1-P	Field mustard	cytosol	58.1	57.55
CDX69853	Canola	cytosol	58.1	57.55
CDY37093	Canola	cytosol	57.78	57.41
AT5G65020.1	Thale cress	cytosol	57.78	57.41
AT1G35720.1	Thale cress	cytosol	57.78	57.41
PGSC0003DMT400004741	Potato	cytosol, mitochondrion	57.46	57.1
Bra036764.1-P	Field mustard	cytosol	57.46	57.1
CDY41873	Canola	cytosol	57.46	57.1
CDX73353	Canola	cytosol	57.46	57.1
AT5G10220.1	Thale cress	cytosol	57.46	56.92
CDX91750	Canola	cytosol	56.83	56.47
Bra034402.1-P	Field mustard	cytosol	57.78	56.0
CDY08828	Canola	cytosol	41.59	55.27
PGSC0003DMT400056154	Potato	cytosol	53.33	53.33
Bra039578.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	44.13	52.45
KRH54748	Soybean	endoplasmic reticulum	29.21	52.27
Solyc05g051980.2.1	Tomato	cytosol	57.14	51.87
CDX96985	Canola	cytosol	34.6	51.66
TraesCS2D01G370100.1	Wheat	cytosol	48.89	48.58
CDY03132	Canola	cytosol	31.75	45.87
TraesCS4D01G278700.1	Wheat	cytosol	43.17	42.63
TraesCS1D01G239900.1	Wheat	cytosol	41.9	36.46
TraesCS3D01G479100.1	Wheat	cytosol, plastid	36.51	36.39
TraesCS1D01G076600.1	Wheat	cytosol	36.19	36.08
TraesCS1D01G239800.2	Wheat	cytosol	34.6	34.6
TraesCS5D01G209400.2	Wheat	cytosol	37.14	34.51
TraesCS4D01G278600.1	Wheat	plastid	35.87	31.13
VIT_13s0019g00600.t01	Wine grape	cytosol	15.56	30.06
TraesCS5D01G242700.2	Wheat	cytosol	27.3	26.06

Protein Annotations

Gene3D:1.10.220.10	MapMan:35.1	InterPro:Annexin	InterPro:AnnexinD_plant	InterPro:Annexin_repeat	InterPro:Annexin_repeat_CS
InterPro:Annexin_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005544	GO:GO:0008289
InterPro:IPR037104	PFAM:PF00191	PRINTS:PR00196	PRINTS:PR01814	ScanProsite:PS00223	PANTHER:PTHR10502
PANTHER:PTHR10502:SF131	SMART:SM00335	SUPFAM:SSF47874	EnsemblPlantsGene:TraesCS6D01G280300	EnsemblPlants:TraesCS6D01G280300.1	SEG:seg

Description

No Description!

Coordinates

chr6D:+:388116550..388118563

Molecular Weight (calculated)

35334.0 Da

IEP (calculated)

6.795

GRAVY (calculated)

-0.398

Length

315 amino acids

Sequence
(BLAST)

001: MATLSVPAAV PAVAEDCEQL RKAFAGWGTN ERLIVSILAH RDAAQRRAIR RAYAEAYGEE LLRAIGDEIH GKFERAVTQW TLDPAERDAE LAGEEAKKWQ
101: PGGRALVEIA CARTPAQLFA AKQAYHDRFK RSLEEDVAAH VTGDFRKLLV PLVSAYRYDG PEVNTSLAHS EAKILNGKIN EKAYSDDEIV RILTTRSKAQ
201: LLATFNSYND QFSHPITKDL KEDPKNEFLS TLRAIIRCFT CPDRYFEKVV RLALGGVGTD ENTLTRVITT RAEVDLKVIK EAYQKRNSVP LEKAVSKETS
301: RDYEDMMLAL LGAEY

Best Arabidopsis Sequence Match ( AT5G10230.1 )
(BLAST)

001: MASLKVPATV PLPEEDAEQL YKAFKGWGTN ERMIISILAH RNATQRSFIR AVYAANYNKD LLKELDRELS GDFERAVMLW TFEPAERDAY LAKESTKMFT
101: KNNWVLVEIA CTRSALELFN AKQAYQARYK TSLEEDVAYH TSGDIRKLLV PLVSTFRYDG DEVNMTLARS EAKILHEKIK EKAYADDDLI RILTTRSKAQ
201: ISATLNHYKN NFGTSMSKYL KEDSENEYIQ LLKAVIKCLT YPEKYFEKVL RQAINKLGTD EWGLTRVVTT RAEFDMERIK EEYIRRNSVP LDRAIAKDTH
301: GDYEDILLAL LGHDHA

Arabidopsis Description

ANNAT7Annexin D7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX07]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.