Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS2A01G403300.2 | |
| TraesCS2B01G421200.3 | |
| TraesCS2D01G400400.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G38750.1 | TraesCS2A01G403300.2 | AT2G02090.1 | 21798944 |
| AT2G38750.1 | TraesCS2B01G421200.3 | AT2G02090.1 | 21798944 |
| AT2G38750.1 | TraesCS2D01G400400.1 | AT2G02090.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G251800.1 | Wheat | cytosol | 98.1 | 98.1 |
| TraesCS1A01G239600.1 | Wheat | cytosol | 95.87 | 95.87 |
| HORVU1Hr1G057170.11 | Barley | cytosol | 97.46 | 83.2 |
| Os05t0382600-02 | Rice | nucleus | 82.86 | 81.82 |
| KXG21898 | Sorghum | cytosol | 82.54 | 79.51 |
| Zm00001d038065_P001 | Maize | cytosol | 75.87 | 73.77 |
| GSMUA_Achr3P17520_001 | Banana | cytosol | 60.32 | 61.49 |
| TraesCS4D01G278600.1 | Wheat | plastid | 59.68 | 51.79 |
| KRH13431 | Soybean | cytosol, nucleus | 51.43 | 51.59 |
| VIT_13s0019g00750.t01 | Wine grape | cytosol | 51.11 | 51.27 |
| KRH20781 | Soybean | cytosol | 50.79 | 50.96 |
| VIT_13s0139g00480.t01 | Wine grape | cytosol | 30.16 | 50.0 |
| AT2G38750.1 | Thale cress | cytosol | 46.03 | 45.45 |
| PGSC0003DMT400050067 | Potato | cytosol | 45.4 | 45.25 |
| Solyc01g097520.2.1 | Tomato | nucleus | 44.76 | 44.62 |
| Solyc01g097550.2.1 | Tomato | cytosol | 43.17 | 43.45 |
| CDX93305 | Canola | cytosol | 43.81 | 43.12 |
| CDY07704 | Canola | cytosol | 42.54 | 42.54 |
| CDY18369 | Canola | cytosol | 43.17 | 42.5 |
| Bra017103.1-P | Field mustard | cytosol | 43.17 | 42.5 |
| VIT_13s0139g00420.t01 | Wine grape | cytosol | 33.02 | 42.28 |
| Bra000090.1-P | Field mustard | cytosol | 42.22 | 42.22 |
| CDY14436 | Canola | cytosol | 42.22 | 42.22 |
| VIT_00s0131g00350.t01 | Wine grape | cytosol | 42.86 | 41.93 |
| VIT_00s0131g00310.t01 | Wine grape | cytosol | 41.27 | 40.37 |
| VIT_00s0201g00090.t01 | Wine grape | cytosol | 21.59 | 40.0 |
| VIT_00s0631g00010.t01 | Wine grape | cytosol | 12.7 | 36.36 |
| TraesCS7D01G181600.1 | Wheat | cytosol, golgi, unclear | 36.19 | 36.31 |
| TraesCS4D01G278700.1 | Wheat | cytosol | 35.56 | 35.11 |
| TraesCS6D01G280300.1 | Wheat | cytosol, golgi, unclear | 34.6 | 34.6 |
| TraesCS2D01G370100.1 | Wheat | cytosol | 32.06 | 31.86 |
| TraesCS1D01G239900.1 | Wheat | cytosol | 33.33 | 29.01 |
| TraesCS1D01G076600.1 | Wheat | cytosol | 27.94 | 27.85 |
| TraesCS3D01G479100.1 | Wheat | cytosol, plastid | 26.98 | 26.9 |
| TraesCS5D01G209400.2 | Wheat | cytosol | 25.4 | 23.6 |
| TraesCS5D01G242700.2 | Wheat | cytosol | 20.95 | 20.0 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G239800.2 | EnsemblPlantsGene:TraesCS1D01G239800 | Gene3D:1.10.220.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005544 | GO:GO:0008289 | InterPro:Annexin_repeat | InterPro:Annexin_sf | InterPro:IPR037104 | PANTHER:PTHR10502 |
| PANTHER:PTHR10502:SF124 | PFAM:PF00191 | SEG:seg | SMART:SM00335 | SUPFAM:SSF47874 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1D:-:329725122..329726271
Molecular Weight (calculated)
34819.6 Da
IEP (calculated)
6.964
GRAVY (calculated)
-0.264
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEVQALTK AFSGLGGLGV DEPTMVAALA NWRRQPEKRS GFRKSFPGLF KEHGVIERCE DEYMLHLAAE FSRFKNLMVL WAMHPWERDA RLAHHVLHQA
101: HPAAIVVEVA CTRSAEELLG ARKAYMALFH HSLEEDVAYR AKDKPYCSLL VGLVSAYRYE GPKVSDDTAK AEAKALGAAV KSAAGGKLVE NDEVVRILTT
201: RSKPHLVQTF KYYKELHGKH IEEDLGSEEA LREAVQCLAT PERYFSQVMA AALREGADHH GKEALARVAV TRSDVDMDGI RAAYQEQFGA KLEDAVAGSA
301: HGHFRDALVS LIVGK
101: HPAAIVVEVA CTRSAEELLG ARKAYMALFH HSLEEDVAYR AKDKPYCSLL VGLVSAYRYE GPKVSDDTAK AEAKALGAAV KSAAGGKLVE NDEVVRILTT
201: RSKPHLVQTF KYYKELHGKH IEEDLGSEEA LREAVQCLAT PERYFSQVMA AALREGADHH GKEALARVAV TRSDVDMDGI RAAYQEQFGA KLEDAVAGSA
301: HGHFRDALVS LIVGK
001: MALPLELESL TEAISAGMGM GVDENALIST LGKSQKEHRK LFRKASKSFF VEDEERAFEK CHDHFVRHLK LEFSRFNTAV VMWAMHPWER DARLVKKALK
101: KGEEAYNLIV EVSCTRSAED LLGARKAYHS LFDQSMEEDI ASHVHGPQRK LLVGLVSAYR YEGNKVKDDS AKSDAKILAE AVASSGEEAV EKDEVVRILT
201: TRSKLHLQHL YKHFNEIKGS DLLGGVSKSS LLNEALICLL KPALYFSKIL DASLNKDADK TTKKWLTRVF VTRADHSDEM NEIKEEYNNL YGETLAQRIQ
301: EKIKGNYRDF LLTLLSKSD
101: KGEEAYNLIV EVSCTRSAED LLGARKAYHS LFDQSMEEDI ASHVHGPQRK LLVGLVSAYR YEGNKVKDDS AKSDAKILAE AVASSGEEAV EKDEVVRILT
201: TRSKLHLQHL YKHFNEIKGS DLLGGVSKSS LLNEALICLL KPALYFSKIL DASLNKDADK TTKKWLTRVF VTRADHSDEM NEIKEEYNNL YGETLAQRIQ
301: EKIKGNYRDF LLTLLSKSD
Arabidopsis Description
ANN4Annexin D4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.