Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_01s0010g02080.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G38750.1 | VIT_01s0010g02080.t01 | AT2G02090.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0139g00420.t01 | Wine grape | cytosol | 58.42 | 45.12 |
| KRH20781 | Soybean | cytosol | 66.32 | 40.13 |
| VIT_13s0019g00750.t01 | Wine grape | cytosol | 66.32 | 40.13 |
| KRH13431 | Soybean | cytosol, nucleus | 65.79 | 39.81 |
| VIT_00s0201g00090.t01 | Wine grape | cytosol | 31.58 | 35.29 |
| VIT_00s0131g00310.t01 | Wine grape | cytosol | 58.42 | 34.47 |
| VIT_00s0131g00350.t01 | Wine grape | cytosol | 56.84 | 33.54 |
| CDY14436 | Canola | cytosol | 51.58 | 31.11 |
| CDY07704 | Canola | cytosol | 51.58 | 31.11 |
| GSMUA_Achr3P17520_001 | Banana | cytosol | 50.53 | 31.07 |
| Os05t0382600-02 | Rice | nucleus | 52.11 | 31.03 |
| TraesCS1B01G251800.1 | Wheat | cytosol | 51.05 | 30.79 |
| Bra000090.1-P | Field mustard | cytosol | 51.05 | 30.79 |
| AT2G38750.1 | Thale cress | cytosol | 51.05 | 30.41 |
| TraesCS1D01G239800.2 | Wheat | cytosol | 50.0 | 30.16 |
| CDX93305 | Canola | cytosol | 50.53 | 30.0 |
| CDY18369 | Canola | cytosol | 50.0 | 29.69 |
| Bra017103.1-P | Field mustard | cytosol | 50.0 | 29.69 |
| TraesCS1A01G239600.1 | Wheat | cytosol | 48.95 | 29.52 |
| KXG21898 | Sorghum | cytosol | 49.47 | 28.75 |
| Zm00001d038065_P001 | Maize | cytosol | 48.42 | 28.4 |
| HORVU1Hr1G057170.11 | Barley | cytosol | 51.05 | 26.29 |
| VIT_18s0001g05530.t01 | Wine grape | cytosol | 41.05 | 25.24 |
| VIT_06s0009g03640.t01 | Wine grape | cytosol | 40.0 | 24.13 |
| Zm00001d029207_P001 | Maize | plastid | 44.74 | 23.29 |
| EER92254 | Sorghum | plastid | 45.26 | 23.24 |
| VIT_13s0019g00730.t01 | Wine grape | cytosol | 35.79 | 22.9 |
| VIT_00s0631g00010.t01 | Wine grape | cytosol | 13.16 | 22.73 |
| VIT_00s0131g00050.t01 | Wine grape | cytosol | 30.53 | 22.57 |
| TraesCS4D01G278600.1 | Wheat | plastid | 42.63 | 22.31 |
| HORVU4Hr1G074130.2 | Barley | plastid | 44.21 | 22.22 |
| TraesCS4B01G280100.1 | Wheat | plastid | 42.63 | 22.19 |
| TraesCS4A01G023400.1 | Wheat | plastid | 42.63 | 22.07 |
| VIT_00s0131g00140.t01 | Wine grape | cytosol | 19.47 | 21.02 |
| VIT_00s0131g00210.t01 | Wine grape | cytosol | 26.84 | 20.65 |
| VIT_00s0131g00010.t01 | Wine grape | cytosol | 30.53 | 20.07 |
| VIT_00s0131g00320.t01 | Wine grape | cytosol | 32.11 | 19.18 |
| VIT_13s0019g00600.t01 | Wine grape | cytosol | 16.32 | 19.02 |
| VIT_00s0131g00130.t01 | Wine grape | cytosol | 31.05 | 18.44 |
| VIT_00s0131g00220.t01 | Wine grape | cytosol, nucleus, peroxisome | 18.95 | 17.31 |
| VIT_01s0011g06300.t01 | Wine grape | cytosol | 28.42 | 17.09 |
| VIT_08s0032g00300.t01 | Wine grape | cytosol | 24.74 | 15.61 |
| VIT_03s0017g01740.t01 | Wine grape | golgi | 31.58 | 14.93 |
| VIT_00s0357g00130.t01 | Wine grape | cytosol | 11.58 | 14.19 |
| VIT_00s0131g00060.t01 | Wine grape | cytosol | 3.68 | 6.6 |
Protein Annotations
| ArrayExpress:VIT_13s0139g00480 | EMBL:FN596255 | EnsemblPlants:VIT_13s0139g00480.t01 | EnsemblPlantsGene:VIT_13s0139g00480 | Gene3D:1.10.220.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005544 | GO:GO:0008289 | InterPro:Annexin_repeat | InterPro:Annexin_sf |
| InterPro:IPR037104 | PANTHER:PTHR10502 | PANTHER:PTHR10502:SF104 | PFAM:PF00191 | ProteinID:CCB58682 | ProteinID:CCB58682.1 |
| SMART:SM00335 | SUPFAM:SSF47874 | UniParc:UPI0002109F2D | UniProt:F6HVG9 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr13:-:20879893..20882017
Molecular Weight (calculated)
21484.6 Da
IEP (calculated)
4.841
GRAVY (calculated)
-0.296
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: DIVVQWIMHP WERDAHLVHE AITKGPQAYG LLIEIACTRS SEELLGARKA YQSLFDQSIE DVASPLEGIE CKLLVALVSL YRYEGSRVNE GTARSEATTL
101: AIVVKNVDQK NPIEDDGIVR ILTTRSKLHL KAVVKYYKEI YGKNIDEDHD TLMSLKETLQ CLCNPQAYFN KVLNDAFKDD VDENTKEALT
101: AIVVKNVDQK NPIEDDGIVR ILTTRSKLHL KAVVKYYKEI YGKNIDEDHD TLMSLKETLQ CLCNPQAYFN KVLNDAFKDD VDENTKEALT
001: MGMGVDENAL ISTLGKSQKE HRKLFRKASK SFFVEDEERA FEKCHDHFVR HLKLEFSRFN TAVVMWAMHP WERDARLVKK ALKKGEEAYN LIVEVSCTRS
101: AEDLLGARKA YHSLFDQSME EDIASHVHGP QRKLLVGLVS AYRYEGNKVK DDSAKSDAKI LAEAVASSGE EAVEKDEVVR ILTTRSKLHL QHLYKHFNEI
201: KGSDLLGGVS KSSLLNEALI CLLKPALYFS KILDASLNKD ADKTTKKWLT RVFVTRADHS DEMNEIKEEY NNLYGETLAQ RIQEKIKGNY RDFLLTLLSK
301: SD
101: AEDLLGARKA YHSLFDQSME EDIASHVHGP QRKLLVGLVS AYRYEGNKVK DDSAKSDAKI LAEAVASSGE EAVEKDEVVR ILTTRSKLHL QHLYKHFNEI
201: KGSDLLGGVS KSSLLNEALI CLLKPALYFS KILDASLNKD ADKTTKKWLT RVFVTRADHS DEMNEIKEEY NNLYGETLAQ RIQEKIKGNY RDFLLTLLSK
301: SD
Arabidopsis Description
ANN4Annexin D4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.