CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG26914

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38750.1	KXG26914	AT2G02090.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029207_P001	Maize	plastid	91.35	92.6
TraesCS4B01G280100.1	Wheat	plastid	71.08	72.05
TraesCS4D01G278600.1	Wheat	plastid	70.54	71.9
TraesCS4A01G023400.1	Wheat	plastid	70.81	71.39
HORVU4Hr1G074130.2	Barley	plastid	71.62	70.11
KXG21898	Sorghum	cytosol	55.95	63.3
GSMUA_Achr3P17520_001	Banana	cytosol	50.27	60.19
VIT_13s0019g00750.t01	Wine grape	cytosol	40.54	47.77
KRH13431	Soybean	cytosol, nucleus	40.0	47.13
KRH20781	Soybean	cytosol	39.46	46.5
Solyc01g097520.2.1	Tomato	nucleus	39.19	45.89
VIT_13s0139g00480.t01	Wine grape	cytosol	23.24	45.26
PGSC0003DMT400050067	Potato	cytosol	38.65	45.25
Solyc01g097550.2.1	Tomato	cytosol	37.57	44.41
AT2G38750.1	Thale cress	cytosol	37.84	43.89
VIT_13s0139g00420.t01	Wine grape	cytosol	28.11	42.28
VIT_00s0131g00350.t01	Wine grape	cytosol	35.95	41.3
CDY14436	Canola	cytosol	35.14	41.27
CDY18369	Canola	cytosol	35.68	41.25
Bra017103.1-P	Field mustard	cytosol	35.68	41.25
CDX93305	Canola	cytosol	35.68	41.25
CDY07704	Canola	cytosol	34.86	40.95
Bra000090.1-P	Field mustard	cytosol	34.59	40.63
VIT_00s0131g00310.t01	Wine grape	cytosol	34.86	40.06
EER94840	Sorghum	cytosol	26.22	39.43
OQU90410	Sorghum	cytosol	25.95	38.25
VIT_00s0201g00090.t01	Wine grape	cytosol	17.3	37.65
EES05513	Sorghum	cytosol	31.89	37.58
EER88097	Sorghum	cytosol	31.62	37.26
EES00261	Sorghum	cytosol	31.89	36.09
VIT_00s0631g00010.t01	Wine grape	cytosol	10.27	34.55
EES18149	Sorghum	vacuole	31.08	31.86
EES13861	Sorghum	cytosol	26.49	30.62
EER96704	Sorghum	cytosol	24.05	28.16
OQU89605	Sorghum	nucleus	21.08	24.15
OQU93149	Sorghum	plastid	15.95	18.27

Protein Annotations

Gene3D:1.10.220.10	MapMan:35.1	EntrezGene:8080814	InterPro:Annexin_repeat	InterPro:Annexin_sf	UniProt:C5WZP7
EnsemblPlants:EER92254	ProteinID:EER92254	ProteinID:EER92254.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005544	GO:GO:0008289	InterPro:IPR037104	PFAM:PF00191	PANTHER:PTHR10502	PANTHER:PTHR10502:SF104
SMART:SM00335	EnsemblPlantsGene:SORBI_3001G368000	SUPFAM:SSF47874	UniParc:UPI0001A820E9	RefSeq:XP_002465256.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:65682306..65684474

Molecular Weight (calculated)

41013.6 Da

IEP (calculated)

9.038

GRAVY (calculated)

-0.476

Length

370 amino acids

Sequence
(BLAST)

001: MQQFLAQTGS NSSAATSPPA SPQPQPRLRQ QQQQAPRKER DPQSKEKEAP PAAMADEHQD LTRAFAGLGG LGVDETALVS VLGRWRRQPE KRAQFRRGFL
101: GFFSASAGAG AGIERCEDEY LLHLKAEFAR FKDAAVLWAM HPWERDARWA HHVLHKAHPP QVLVEVACTR AADDLLGARR AYQALYHRSL EEDVAYRVRD
201: ANASLLVGLV SAYRYEGARV SEDLATEEAK ALAAAVRAAP AAKLVQNEQV VRVLATRSKP QLRATFRVYM ELHGKPLEED LAAEPCLREA VKCLDSPPRY
301: FSEVISRAFR DDADRQAKAA LTRVVVSRAD TDMEDIKDAY ARQYGAKLAD AVAKNTHGHY KDALLAIIGK

Best Arabidopsis Sequence Match ( AT2G38750.1 )
(BLAST)

001: MALPLELESL TEAISAGMGM GVDENALIST LGKSQKEHRK LFRKASKSFF VEDEERAFEK CHDHFVRHLK LEFSRFNTAV VMWAMHPWER DARLVKKALK
101: KGEEAYNLIV EVSCTRSAED LLGARKAYHS LFDQSMEEDI ASHVHGPQRK LLVGLVSAYR YEGNKVKDDS AKSDAKILAE AVASSGEEAV EKDEVVRILT
201: TRSKLHLQHL YKHFNEIKGS DLLGGVSKSS LLNEALICLL KPALYFSKIL DASLNKDADK TTKKWLTRVF VTRADHSDEM NEIKEEYNNL YGETLAQRIQ
301: EKIKGNYRDF LLTLLSKSD

Arabidopsis Description

ANN4Annexin D4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.