Factsheet for TraesCS4B01G280100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G403300.2
TraesCS2B01G421200.3
TraesCS2D01G400400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38750.1	TraesCS2A01G403300.2	AT2G02090.1	21798944
AT2G38750.1	TraesCS2B01G421200.3	AT2G02090.1	21798944
AT2G38750.1	TraesCS2D01G400400.1	AT2G02090.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G278600.1	Wheat	plastid	94.79	95.32
TraesCS4A01G023400.1	Wheat	plastid	93.42	92.92
HORVU4Hr1G074130.2	Barley	plastid	92.6	89.42
EER92254	Sorghum	plastid	72.05	71.08
Zm00001d029207_P001	Maize	plastid	70.96	70.96
GSMUA_Achr3P17520_001	Banana	cytosol	51.78	61.16
TraesCS1B01G251800.1	Wheat	cytosol	51.51	59.68
VIT_13s0019g00750.t01	Wine grape	cytosol	40.55	47.13
KRH13431	Soybean	cytosol, nucleus	38.08	44.27
KRH20781	Soybean	cytosol	38.08	44.27
VIT_13s0139g00480.t01	Wine grape	cytosol	22.19	42.63
AT2G38750.1	Thale cress	cytosol	36.99	42.32
Solyc01g097520.2.1	Tomato	nucleus	35.34	40.82
CDY14436	Canola	cytosol	34.79	40.32
Solyc01g097550.2.1	Tomato	cytosol	34.52	40.26
VIT_13s0139g00420.t01	Wine grape	cytosol	27.12	40.24
PGSC0003DMT400050067	Potato	cytosol	34.79	40.19
CDY07704	Canola	cytosol	34.52	40.0
VIT_00s0131g00350.t01	Wine grape	cytosol	35.07	39.75
Bra000090.1-P	Field mustard	cytosol	34.25	39.68
CDY18369	Canola	cytosol	34.25	39.06
Bra017103.1-P	Field mustard	cytosol	34.25	39.06
TraesCS4B01G280200.1	Wheat	cytosol, plastid	33.7	38.56
CDX93305	Canola	cytosol	33.7	38.44
VIT_00s0131g00310.t01	Wine grape	cytosol	33.7	38.2
TraesCS6B01G330100.1	Wheat	cytosol	31.78	36.83
TraesCS7B01G085300.1	Wheat	cytosol	28.22	36.27
TraesCS2B01G152000.2	Wheat	cytosol	32.33	36.09
VIT_00s0201g00090.t01	Wine grape	cytosol	16.16	34.71
TraesCS2B01G391000.1	Wheat	cytosol	29.32	33.75
VIT_00s0631g00010.t01	Wine grape	cytosol	9.86	32.73
TraesCS1B01G251900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	31.78	32.13
TraesCS3B01G531500.1	Wheat	cytosol, plastid	26.3	30.38
TraesCS1B01G092400.1	Wheat	cytosol	20.82	28.68
TraesCS5B01G201700.2	Wheat	cytosol	24.66	28.57
TraesCS5B01G234000.1	Wheat	plastid	21.1	21.51

Protein Annotations

EnsemblPlants:TraesCS4B01G280100.1	EnsemblPlantsGene:TraesCS4B01G280100	Gene3D:1.10.220.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005544	GO:GO:0008289	InterPro:Annexin_repeat	InterPro:Annexin_sf	InterPro:IPR037104	PANTHER:PTHR10502
PANTHER:PTHR10502:SF104	PFAM:PF00191	SEG:seg	SMART:SM00335	SUPFAM:SSF47874	MapMan:35.1

Description

No Description!

Coordinates

chr4B:-:562926757..562928287

Molecular Weight (calculated)

40446.2 Da

IEP (calculated)

9.685

GRAVY (calculated)

-0.477

Length

365 amino acids

Sequence
(BLAST)

001: MQQFLAAQPS SNGSTAVAAA PPPSPSPLRS RPPRREQQSQ SQSIKEATMA DEHQELTKAF SGMGGLGVEE TALVSALGRW RKQPEKRSQF RRGFPGFFTP
101: PAAAVGAGAI ERCSDDYVRH LKTEFARFKN LMVLWAMHPW ERDARWAHRA LHKKHHPASV LVELACTRTA DELLGARRAY HALYHRSLEE DVAYRVKDAA
201: ANRLLLGLVS AYRYEGPRVD EELAREEAAA LSAGPGAKAQ SELVVRVLAT RSKPQLRATF RLYRELHSKL LEEEFGGEAP CLREAVRCLE SPAKYFGEVI
301: DGAFKEGADK QAKAALTRVV VSRSDADMEE IKEAYLKQHG AKLVDAVAKN THGHYRDALL AMIGK

Best Arabidopsis Sequence Match ( AT1G35720.1 )
(BLAST)

001: MATLKVSDSV PAPSDDAEQL RTAFEGWGTN EDLIISILAH RSAEQRKVIR QAYHETYGED LLKTLDKELS NDFERAILLW TLEPGERDAL LANEATKRWT
101: SSNQVLMEVA CTRTSTQLLH ARQAYHARYK KSLEEDVAHH TTGDFRKLLV SLVTSYRYEG DEVNMTLAKQ EAKLVHEKIK DKHYNDEDVI RILSTRSKAQ
201: INATFNRYQD DHGEEILKSL EEGDDDDKFL ALLRSTIQCL TRPELYFVDV LRSAINKTGT DEGALTRIVT TRAEIDLKVI GEEYQRRNSI PLEKAITKDT
301: RGDYEKMLVA LLGEDDA

Arabidopsis Description

ANN1Annexin [Source:UniProtKB/TrEMBL;Acc:A0A178WGZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.