Factsheet for VIT_00s0131g00350.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0010g02080.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38750.1	VIT_01s0010g02080.t01	AT2G02090.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0631g00010.t01	Wine grape	cytosol	31.99	93.64
VIT_00s0201g00090.t01	Wine grape	cytosol	49.38	93.53
VIT_00s0131g00310.t01	Wine grape	cytosol	86.34	86.34
VIT_13s0139g00420.t01	Wine grape	cytosol	63.66	83.33
VIT_13s0139g00480.t01	Wine grape	cytosol	33.54	56.84
VIT_13s0019g00750.t01	Wine grape	cytosol	54.66	56.05
KRH20781	Soybean	cytosol	49.69	50.96
KRH13431	Soybean	cytosol, nucleus	49.07	50.32
CDY14436	Canola	cytosol	45.65	46.67
CDY07704	Canola	cytosol	45.65	46.67
GSMUA_Achr3P17520_001	Banana	cytosol	44.72	46.6
CDY18369	Canola	cytosol	46.27	46.56
Bra017103.1-P	Field mustard	cytosol	46.27	46.56
Bra000090.1-P	Field mustard	cytosol	45.34	46.35
AT2G38750.1	Thale cress	cytosol	45.65	46.08
CDX93305	Canola	cytosol	45.65	45.94
TraesCS1A01G239600.1	Wheat	cytosol	42.55	43.49
TraesCS1B01G251800.1	Wheat	cytosol	42.55	43.49
KXG21898	Sorghum	cytosol	43.79	43.12
Os05t0382600-02	Rice	nucleus	42.55	42.95
TraesCS1D01G239800.2	Wheat	cytosol	41.93	42.86
Zm00001d038065_P001	Maize	cytosol	41.61	41.36
HORVU1Hr1G057170.11	Barley	cytosol	42.86	37.4
EER92254	Sorghum	plastid	41.3	35.95
Zm00001d029207_P001	Maize	plastid	40.68	35.89
TraesCS4B01G280100.1	Wheat	plastid	39.75	35.07
TraesCS4A01G023400.1	Wheat	plastid	39.44	34.6
TraesCS4D01G278600.1	Wheat	plastid	38.82	34.44
VIT_18s0001g05530.t01	Wine grape	cytosol	32.92	34.3
HORVU4Hr1G074130.2	Barley	plastid	38.51	32.8
VIT_06s0009g03640.t01	Wine grape	cytosol	31.99	32.7
VIT_00s0131g00010.t01	Wine grape	cytosol	27.95	31.14
VIT_00s0131g00140.t01	Wine grape	cytosol	15.84	28.98
VIT_13s0019g00730.t01	Wine grape	cytosol	25.78	27.95
VIT_00s0131g00320.t01	Wine grape	cytosol	26.71	27.04
VIT_01s0011g06300.t01	Wine grape	cytosol	26.09	26.58
VIT_00s0131g00050.t01	Wine grape	cytosol	20.5	25.68
VIT_00s0131g00130.t01	Wine grape	cytosol	25.47	25.62
VIT_00s0131g00220.t01	Wine grape	cytosol, nucleus, peroxisome	16.46	25.48
VIT_00s0357g00130.t01	Wine grape	cytosol	12.11	25.16
VIT_00s0131g00210.t01	Wine grape	cytosol	18.63	24.29
VIT_13s0019g00600.t01	Wine grape	cytosol	11.8	23.31
VIT_03s0017g01740.t01	Wine grape	golgi	28.57	22.89
VIT_00s0131g00060.t01	Wine grape	cytosol	7.45	22.64
VIT_08s0032g00300.t01	Wine grape	cytosol	19.57	20.93

Protein Annotations

Gene3D:1.10.220.10	EntrezGene:100248274	wikigene:100248274	EntrezGene:100265367	wikigene:100265367	EntrezGene:100852701
wikigene:100852701	EntrezGene:100854279	wikigene:100854279	MapMan:35.1	InterPro:Annexin	InterPro:Annexin_repeat
InterPro:Annexin_sf	ProteinID:CCB49450	ProteinID:CCB49450.1	UniProt:F6HB56	EMBL:FN595508	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005544	GO:GO:0008289	InterPro:IPR037104	EntrezGene:LOC100248274
wikigene:LOC100248274	EntrezGene:LOC100265367	wikigene:LOC100265367	EntrezGene:LOC100852701	wikigene:LOC100852701	EntrezGene:LOC100854279
wikigene:LOC100854279	PFAM:PF00191	PRINTS:PR00196	PANTHER:PTHR10502	PANTHER:PTHR10502:SF104	SMART:SM00335
SUPFAM:SSF47874	UniParc:UPI0001986265	ArrayExpress:VIT_00s0131g00350	EnsemblPlantsGene:VIT_00s0131g00350	EnsemblPlants:VIT_00s0131g00350.t01	RefSeq:XP_003634957
RefSeq:XP_003634957.1	RefSeq:XP_003634961	RefSeq:XP_003634961.1	RefSeq:XP_003634963	RefSeq:XP_003634963.1	RefSeq:XP_003635061
RefSeq:XP_003635061.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:2918687..2922849

Molecular Weight (calculated)

36931.1 Da

IEP (calculated)

6.194

GRAVY (calculated)

-0.419

Length

322 amino acids

Sequence
(BLAST)

001: MSSSDALAKS FSVSHSGIFG VDEKSMLEIL VKWQPEHLST FRNETSSIFL KDERFPFEKC EEILLKFLKR EFKRFKDAVV QWTMHPWERD ARMARKALKR
101: GSQAYGLLIE LACTRSSDEL LGARRAYQSL YSESIEEDVA CRVEGIQRQF LVALVSSYRY EGSQKNDVAI ESDAQKLNKA IRNGDKTMLI KDEEIVRILT
201: TRSKPHLVEV FKCYYDDFDK DIVEDLSEES SLKDTIYCLC APPVYFSKIL DSAMKANATK NEKEALTRVI VTRTDVDMKD IAEEYNKQYG TPLAKKIEDV
301: ALGNYKDFLV TLVQRALAKG SE

Best Arabidopsis Sequence Match ( AT2G38750.2 )
(BLAST)

001: MGMGVDENAL ISTLGKSQKE HRKLFRKASK SFFVEDEERA FEKCHDHFVR HLKLEFSRFN TAVVMWAMHP WERDARLVKK ALKKGEEAYN LIVEVSCTRS
101: AEDLLGARKA YHSLFDQSME EDIASHVHGP QRKLLVGLVS AYRYEGNKVK DDSAKSDAKI LAEAVASSGE EAVEKDEVVR ILTTRSKLHL QHLYKHFNEI
201: KGSDLLGGVS KSSLLNEALI CLLKPALYFS KILDASLNKD ADKTTKKWLT RVFVTRADHS DEMNEIKEEY NNLYGETLAQ RIQEKIKGNY RDFLLTLLSK
301: SD

Arabidopsis Description

ANN4Annexin D4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.