Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G38750.1 | CDY04120 | AT2G02090.1 | 21798944 |
| AT2G38750.1 | CDY48619 | AT2G02090.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18369 | Canola | cytosol | 96.88 | 96.88 |
| CDY07704 | Canola | cytosol | 87.5 | 88.89 |
| CDY14436 | Canola | cytosol | 86.56 | 87.94 |
| AT2G38750.1 | Thale cress | cytosol | 83.44 | 83.7 |
| KRH13431 | Soybean | cytosol, nucleus | 56.25 | 57.32 |
| KRH20781 | Soybean | cytosol | 55.0 | 56.05 |
| PGSC0003DMT400050067 | Potato | cytosol | 50.31 | 50.95 |
| Solyc01g097520.2.1 | Tomato | nucleus | 50.0 | 50.63 |
| VIT_13s0139g00480.t01 | Wine grape | cytosol | 30.0 | 50.53 |
| Solyc01g097550.2.1 | Tomato | cytosol | 48.12 | 49.2 |
| VIT_13s0139g00420.t01 | Wine grape | cytosol | 36.88 | 47.97 |
| VIT_00s0131g00350.t01 | Wine grape | cytosol | 45.94 | 45.65 |
| GSMUA_Achr3P17520_001 | Banana | cytosol | 43.44 | 44.98 |
| VIT_00s0131g00310.t01 | Wine grape | cytosol | 45.0 | 44.72 |
| VIT_00s0201g00090.t01 | Wine grape | cytosol | 23.75 | 44.71 |
| TraesCS1D01G239800.2 | Wheat | cytosol | 43.12 | 43.81 |
| Os05t0382600-02 | Rice | nucleus | 42.81 | 42.95 |
| TraesCS1B01G251800.1 | Wheat | cytosol | 42.19 | 42.86 |
| VIT_00s0631g00010.t01 | Wine grape | cytosol | 14.69 | 42.73 |
| TraesCS1A01G239600.1 | Wheat | cytosol | 41.25 | 41.9 |
| KXG21898 | Sorghum | cytosol | 41.88 | 40.98 |
| Zm00001d038065_P001 | Maize | cytosol | 40.94 | 40.43 |
| HORVU1Hr1G057170.11 | Barley | cytosol | 42.5 | 36.86 |
| CDY41873 | Canola | cytosol | 36.25 | 36.59 |
| CDX69683 | Canola | cytosol | 35.94 | 36.51 |
| CDX97190 | Canola | cytosol | 35.94 | 36.51 |
| CDX91750 | Canola | cytosol | 35.62 | 35.96 |
| CDY71429 | Canola | cytosol | 25.62 | 35.81 |
| EER92254 | Sorghum | plastid | 41.25 | 35.68 |
| CDY37093 | Canola | cytosol | 35.31 | 35.65 |
| Zm00001d029207_P001 | Maize | plastid | 40.62 | 35.62 |
| CDY33992 | Canola | cytosol | 34.69 | 35.13 |
| CDY14530 | Canola | cytosol | 34.69 | 35.13 |
| CDY18368 | Canola | cytosol | 35.0 | 35.11 |
| CDX93304 | Canola | cytosol | 35.0 | 35.11 |
| CDX73353 | Canola | cytosol | 34.69 | 35.02 |
| CDX69852 | Canola | cytosol | 34.06 | 34.49 |
| CDY14435 | Canola | cytosol | 34.38 | 34.48 |
| CDY07703 | Canola | cytosol | 34.06 | 34.17 |
| CDX96985 | Canola | cytosol | 22.5 | 34.12 |
| CDY08828 | Canola | cytosol | 25.0 | 33.76 |
| TraesCS4B01G280100.1 | Wheat | plastid | 38.44 | 33.7 |
| TraesCS4D01G278600.1 | Wheat | plastid | 38.12 | 33.61 |
| TraesCS4A01G023400.1 | Wheat | plastid | 38.44 | 33.52 |
| CDX69853 | Canola | cytosol | 32.81 | 33.02 |
| CDX96984 | Canola | cytosol | 32.5 | 32.7 |
| HORVU4Hr1G074130.2 | Barley | plastid | 38.44 | 32.54 |
| CDY03132 | Canola | cytosol | 21.25 | 31.19 |
| CDY12688 | Canola | cytosol | 29.06 | 29.43 |
| CDY54655 | Canola | cytosol | 29.06 | 29.43 |
Protein Annotations
| Gene3D:1.10.220.10 | MapMan:35.1 | GO:A0A078DVD9 | InterPro:Annexin | InterPro:Annexin_repeat | InterPro:Annexin_sf |
| EnsemblPlants:CDX93305 | ProteinID:CDX93305 | ProteinID:CDX93305.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005544 | GO:GO:0008289 | EnsemblPlantsGene:GSBRNA2T00155277001 | InterPro:IPR037104 | PFAM:PF00191 | PRINTS:PR00196 |
| PANTHER:PTHR10502 | PANTHER:PTHR10502:SF104 | SMART:SM00335 | SUPFAM:SSF47874 | UniParc:UPI0004EE3533 | SEG:seg |
Description
BnaC04g45910D
Coordinates
chrLK031875:+:857254..859304
Molecular Weight (calculated)
36349.3 Da
IEP (calculated)
8.806
GRAVY (calculated)
-0.483
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHTLDLESI VEAFSGKNVG MGVDEKALIS TLGNSHKDHR KLFRKASKNF FVEDEQRAFE KCHDQFVKHL KLEFSRFNNA VVMWSMHPWE RDARVVKKAL
101: KKGDECYSLI VEVACTRSSE DLLGARKAYH SLFDQSMEED IASNIHGSRR KLLVGLVSAY RYEGNKVKDD SAKSDAKILA EAVASPGEKA IENDEVVRIL
201: STRSKLHLQQ LYKHFNQIKG SDLLVGVSDS SLLNDALLCL LKPSVYFSKI LNASLNKDAD KGTKKWLTRV FVTRADHSDE MKDIAEEYNQ RYGETLAQNI
301: QEKIRGNYRD FLLTLLSKSN
101: KKGDECYSLI VEVACTRSSE DLLGARKAYH SLFDQSMEED IASNIHGSRR KLLVGLVSAY RYEGNKVKDD SAKSDAKILA EAVASPGEKA IENDEVVRIL
201: STRSKLHLQQ LYKHFNQIKG SDLLVGVSDS SLLNDALLCL LKPSVYFSKI LNASLNKDAD KGTKKWLTRV FVTRADHSDE MKDIAEEYNQ RYGETLAQNI
301: QEKIRGNYRD FLLTLLSKSN
001: MALPLELESL TEAISAGMGM GVDENALIST LGKSQKEHRK LFRKASKSFF VEDEERAFEK CHDHFVRHLK LEFSRFNTAV VMWAMHPWER DARLVKKALK
101: KGEEAYNLIV EVSCTRSAED LLGARKAYHS LFDQSMEEDI ASHVHGPQRK LLVGLVSAYR YEGNKVKDDS AKSDAKILAE AVASSGEEAV EKDEVVRILT
201: TRSKLHLQHL YKHFNEIKGS DLLGGVSKSS LLNEALICLL KPALYFSKIL DASLNKDADK TTKKWLTRVF VTRADHSDEM NEIKEEYNNL YGETLAQRIQ
301: EKIKGNYRDF LLTLLSKSD
101: KGEEAYNLIV EVSCTRSAED LLGARKAYHS LFDQSMEEDI ASHVHGPQRK LLVGLVSAYR YEGNKVKDDS AKSDAKILAE AVASSGEEAV EKDEVVRILT
201: TRSKLHLQHL YKHFNEIKGS DLLGGVSKSS LLNEALICLL KPALYFSKIL DASLNKDADK TTKKWLTRVF VTRADHSDEM NEIKEEYNNL YGETLAQRIQ
301: EKIKGNYRDF LLTLLSKSD
Arabidopsis Description
ANN4Annexin D4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.