Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_01s0010g02080.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G38750.1 | VIT_01s0010g02080.t01 | AT2G02090.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0201g00090.t01 | Wine grape | cytosol | 100.0 | 64.71 |
| VIT_13s0139g00420.t01 | Wine grape | cytosol | 78.18 | 34.96 |
| VIT_00s0131g00350.t01 | Wine grape | cytosol | 93.64 | 31.99 |
| VIT_00s0131g00310.t01 | Wine grape | cytosol | 78.18 | 26.71 |
| VIT_13s0019g00750.t01 | Wine grape | cytosol | 53.64 | 18.79 |
| VIT_00s0131g00140.t01 | Wine grape | cytosol | 27.27 | 17.05 |
| KRH20781 | Soybean | cytosol | 46.36 | 16.24 |
| KRH13431 | Soybean | cytosol, nucleus | 45.45 | 15.92 |
| VIT_00s0131g00220.t01 | Wine grape | cytosol, nucleus, peroxisome | 28.18 | 14.9 |
| CDX93305 | Canola | cytosol | 42.73 | 14.69 |
| CDY14436 | Canola | cytosol | 41.82 | 14.6 |
| CDY07704 | Canola | cytosol | 41.82 | 14.6 |
| Bra000090.1-P | Field mustard | cytosol | 41.82 | 14.6 |
| GSMUA_Achr3P17520_001 | Banana | cytosol | 40.91 | 14.56 |
| CDY18369 | Canola | cytosol | 41.82 | 14.38 |
| Bra017103.1-P | Field mustard | cytosol | 41.82 | 14.38 |
| KXG21898 | Sorghum | cytosol | 40.91 | 13.76 |
| Zm00001d038065_P001 | Maize | cytosol | 40.0 | 13.58 |
| AT2G38750.1 | Thale cress | cytosol | 39.09 | 13.48 |
| Os05t0382600-02 | Rice | nucleus | 39.09 | 13.48 |
| TraesCS1B01G251800.1 | Wheat | cytosol | 38.18 | 13.33 |
| VIT_13s0139g00480.t01 | Wine grape | cytosol | 22.73 | 13.16 |
| TraesCS1D01G239800.2 | Wheat | cytosol | 36.36 | 12.7 |
| TraesCS1A01G239600.1 | Wheat | cytosol | 36.36 | 12.7 |
| VIT_18s0001g05530.t01 | Wine grape | cytosol | 34.55 | 12.3 |
| HORVU1Hr1G057170.11 | Barley | cytosol | 37.27 | 11.11 |
| EER92254 | Sorghum | plastid | 34.55 | 10.27 |
| Zm00001d029207_P001 | Maize | plastid | 33.64 | 10.14 |
| TraesCS4B01G280100.1 | Wheat | plastid | 32.73 | 9.86 |
| VIT_06s0009g03640.t01 | Wine grape | cytosol | 28.18 | 9.84 |
| VIT_01s0011g06300.t01 | Wine grape | cytosol | 28.18 | 9.81 |
| TraesCS4A01G023400.1 | Wheat | plastid | 32.73 | 9.81 |
| TraesCS4D01G278600.1 | Wheat | plastid | 31.82 | 9.64 |
| VIT_00s0131g00320.t01 | Wine grape | cytosol | 27.27 | 9.43 |
| VIT_00s0131g00130.t01 | Wine grape | cytosol | 27.27 | 9.38 |
| VIT_00s0131g00010.t01 | Wine grape | cytosol | 24.55 | 9.34 |
| VIT_08s0032g00300.t01 | Wine grape | cytosol | 25.45 | 9.3 |
| HORVU4Hr1G074130.2 | Barley | plastid | 30.91 | 8.99 |
| VIT_03s0017g01740.t01 | Wine grape | golgi | 28.18 | 7.71 |
| VIT_13s0019g00730.t01 | Wine grape | cytosol | 17.27 | 6.4 |
| VIT_00s0131g00050.t01 | Wine grape | cytosol | 11.82 | 5.06 |
| VIT_00s0131g00210.t01 | Wine grape | cytosol | 10.91 | 4.86 |
| VIT_00s0357g00130.t01 | Wine grape | cytosol | 0.91 | 0.65 |
| VIT_13s0019g00600.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_00s0131g00060.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_00s0631g00010 | EMBL:FN596059 | EnsemblPlants:VIT_00s0631g00010.t01 | EnsemblPlantsGene:VIT_00s0631g00010 | Gene3D:1.10.220.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005544 | GO:GO:0008289 | InterPro:Annexin_repeat | InterPro:Annexin_sf |
| InterPro:IPR037104 | PANTHER:PTHR10502 | PANTHER:PTHR10502:SF104 | PFAM:PF00191 | ProteinID:CCB57435 | ProteinID:CCB57435.1 |
| SMART:SM00335 | SUPFAM:SSF47874 | UniParc:UPI00021085AF | UniProt:F6HRX7 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrUn:-:33244914..33246410
Molecular Weight (calculated)
12592.0 Da
IEP (calculated)
4.578
GRAVY (calculated)
-0.308
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: VFKCYYYDFD RDIVEDLGEE SGLKDTIYCL CAPQVYFSKI LDSAMKANAT KNEQEALTRV IVTRTDVDMK DIAEEYNKQY GTPLAKKIED VAIGNYKDFL
101: VTLVQRALAK
101: VTLVQRALAK
001: MGMGVDENAL ISTLGKSQKE HRKLFRKASK SFFVEDEERA FEKCHDHFVR HLKLEFSRFN TAVVMWAMHP WERDARLVKK ALKKGEEAYN LIVEVSCTRS
101: AEDLLGARKA YHSLFDQSME EDIASHVHGP QRKLLVGLVS AYRYEGNKVK DDSAKSDAKI LAEAVASSGE EAVEKDEVVR ILTTRSKLHL QHLYKHFNEI
201: KGSDLLGGVS KSSLLNEALI CLLKPALYFS KILDASLNKD ADKTTKKWLT RVFVTRADHS DEMNEIKEEY NNLYGETLAQ RIQEKIKGNY RDFLLTLLSK
301: SD
101: AEDLLGARKA YHSLFDQSME EDIASHVHGP QRKLLVGLVS AYRYEGNKVK DDSAKSDAKI LAEAVASSGE EAVEKDEVVR ILTTRSKLHL QHLYKHFNEI
201: KGSDLLGGVS KSSLLNEALI CLLKPALYFS KILDASLNKD ADKTTKKWLT RVFVTRADHS DEMNEIKEEY NNLYGETLAQ RIQEKIKGNY RDFLLTLLSK
301: SD
Arabidopsis Description
ANN4Annexin D4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.