Factsheet for TraesCS4A01G023400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G403300.2
TraesCS2B01G421200.3
TraesCS2D01G400400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38750.1	TraesCS2A01G403300.2	AT2G02090.1	21798944
AT2G38750.1	TraesCS2B01G421200.3	AT2G02090.1	21798944
AT2G38750.1	TraesCS2D01G400400.1	AT2G02090.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G278600.1	Wheat	plastid	94.55	95.59
TraesCS4B01G280100.1	Wheat	plastid	92.92	93.42
HORVU4Hr1G074130.2	Barley	plastid	91.55	88.89
EER92254	Sorghum	plastid	71.39	70.81
Zm00001d029207_P001	Maize	plastid	69.75	70.14
GSMUA_Achr3P17520_001	Banana	cytosol	51.23	60.84
TraesCS1A01G239600.1	Wheat	cytosol	50.95	59.37
VIT_13s0019g00750.t01	Wine grape	cytosol	40.05	46.82
KRH13431	Soybean	cytosol, nucleus	38.15	44.59
KRH20781	Soybean	cytosol	37.87	44.27
AT2G38750.1	Thale cress	cytosol	37.6	43.26
VIT_13s0139g00480.t01	Wine grape	cytosol	22.07	42.63
Solyc01g097520.2.1	Tomato	nucleus	35.42	41.14
VIT_13s0139g00420.t01	Wine grape	cytosol	27.25	40.65
CDY14436	Canola	cytosol	34.88	40.63
Solyc01g097550.2.1	Tomato	cytosol	34.6	40.58
PGSC0003DMT400050067	Potato	cytosol	34.88	40.51
CDY07704	Canola	cytosol	34.6	40.32
TraesCS4A01G023300.1	Wheat	cytosol	25.61	40.17
Bra000090.1-P	Field mustard	cytosol	34.33	40.0
VIT_00s0131g00350.t01	Wine grape	cytosol	34.6	39.44
CDY18369	Canola	cytosol	34.06	39.06
Bra017103.1-P	Field mustard	cytosol	34.06	39.06
CDX93305	Canola	cytosol	33.52	38.44
VIT_00s0131g00310.t01	Wine grape	cytosol	33.52	38.2
TraesCS7A01G180100.1	Wheat	cytosol, golgi, unclear	32.15	37.58
TraesCS6A01G300400.1	Wheat	golgi, unclear	31.61	36.83
TraesCS2A01G129800.1	Wheat	cytosol	31.88	35.78
VIT_00s0201g00090.t01	Wine grape	cytosol	15.8	34.12
VIT_00s0631g00010.t01	Wine grape	cytosol	9.81	32.73
TraesCS2A01G373800.1	Wheat	mitochondrion	28.07	31.02
TraesCS1A01G239700.2	Wheat	cytosol	31.34	29.79
TraesCS1A01G073900.1	Wheat	cytosol	24.52	28.48
TraesCS3A01G484400.1	Wheat	plastid	26.43	26.01
TraesCS5A01G235600.1	Wheat	cytosol	20.16	22.98
TraesCS5A01G203000.1	Wheat	cytosol	23.71	22.66

Protein Annotations

EnsemblPlants:TraesCS4A01G023400.1	EnsemblPlantsGene:TraesCS4A01G023400	Gene3D:1.10.220.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005544	GO:GO:0008289	InterPro:Annexin_repeat	InterPro:Annexin_sf	InterPro:IPR037104	PANTHER:PTHR10502
PANTHER:PTHR10502:SF104	PFAM:PF00191	SEG:seg	SMART:SM00335	SUPFAM:SSF47874	MapMan:35.1

Description

No Description!

Coordinates

chr4A:+:16505714..16506934

Molecular Weight (calculated)

40444.2 Da

IEP (calculated)

9.561

GRAVY (calculated)

-0.443

Length

367 amino acids

Sequence
(BLAST)

001: MQQFLAAQPS SNGSTAAAAA AAPPSSPSPL RSRPPRREQQ QQQSIVKEAT MADEHQELTK AFSGMGGLGV EETALVSALG RWRKQPEKRA QFRRGFPGFF
101: APAAAGAGAG AIERCSDDYV RHLKTEFARF KTLMVLWAMH PWERDARWAH RALHKKHHPV AVLVELACTR AADELLGARR AYHALYHRSL EEDVAYRVKD
201: AAANRLLLGL VTAYRYEGPR VDEELAKEEA AALSGAGAKA AQSELVVRVL ATRSKPQLRA TFRLYRELHG KPLEEEFGGE APCLREAVRC LESPARYFGE
301: VIDGAFKEGA DKQAKAALTR VVVSRSDADM EEIKEAYLKQ HGDKLVDAVA KNTHGHYRDA LLAMIGK

Best Arabidopsis Sequence Match ( AT2G38750.1 )
(BLAST)

001: MALPLELESL TEAISAGMGM GVDENALIST LGKSQKEHRK LFRKASKSFF VEDEERAFEK CHDHFVRHLK LEFSRFNTAV VMWAMHPWER DARLVKKALK
101: KGEEAYNLIV EVSCTRSAED LLGARKAYHS LFDQSMEEDI ASHVHGPQRK LLVGLVSAYR YEGNKVKDDS AKSDAKILAE AVASSGEEAV EKDEVVRILT
201: TRSKLHLQHL YKHFNEIKGS DLLGGVSKSS LLNEALICLL KPALYFSKIL DASLNKDADK TTKKWLTRVF VTRADHSDEM NEIKEEYNNL YGETLAQRIQ
301: EKIKGNYRDF LLTLLSKSD

Arabidopsis Description

ANN4Annexin D4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.