Factsheet for GSMUA_Achr3P17520_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P25930_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38750.1	GSMUA_Achr4P25930_001	AT2G02090.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G251800.1	Wheat	cytosol	62.14	60.95
TraesCS1D01G239800.2	Wheat	cytosol	61.49	60.32
KXG21898	Sorghum	cytosol	62.78	59.33
TraesCS1A01G239600.1	Wheat	cytosol	60.19	59.05
Os05t0382600-02	Rice	nucleus	59.87	57.99
Zm00001d038065_P001	Maize	cytosol	58.58	55.86
VIT_13s0019g00750.t01	Wine grape	cytosol	52.75	51.91
TraesCS4B01G280100.1	Wheat	plastid	61.16	51.78
HORVU1Hr1G057170.11	Barley	cytosol	61.81	51.76
TraesCS4D01G278600.1	Wheat	plastid	60.52	51.52
TraesCS4A01G023400.1	Wheat	plastid	60.84	51.23
KRH13431	Soybean	cytosol, nucleus	51.46	50.64
VIT_13s0139g00480.t01	Wine grape	cytosol	31.07	50.53
KRH20781	Soybean	cytosol	51.13	50.32
EER92254	Sorghum	plastid	60.19	50.27
HORVU4Hr1G074130.2	Barley	plastid	60.84	49.74
Zm00001d029207_P001	Maize	plastid	58.25	49.32
AT2G38750.1	Thale cress	cytosol	48.22	46.71
Solyc01g097520.2.1	Tomato	nucleus	46.28	45.25
VIT_00s0131g00350.t01	Wine grape	cytosol	46.6	44.72
VIT_13s0139g00420.t01	Wine grape	cytosol	35.6	44.72
PGSC0003DMT400050067	Potato	cytosol	45.31	44.3
VIT_00s0201g00090.t01	Wine grape	cytosol	24.27	44.12
CDY07704	Canola	cytosol	44.66	43.81
CDY14436	Canola	cytosol	44.66	43.81
Bra017103.1-P	Field mustard	cytosol	45.31	43.75
CDY18369	Canola	cytosol	45.31	43.75
Bra000090.1-P	Field mustard	cytosol	44.34	43.49
CDX93305	Canola	cytosol	44.98	43.44
Solyc01g097550.2.1	Tomato	cytosol	43.37	42.81
VIT_00s0131g00310.t01	Wine grape	cytosol	44.34	42.55
VIT_00s0631g00010.t01	Wine grape	cytosol	14.56	40.91
GSMUA_Achr8P00100_001	Banana	cytosol	38.19	36.99
GSMUA_Achr8P17240_001	Banana	cytosol	37.22	36.39
GSMUA_Achr4P00360_001	Banana	cytosol	34.3	34.64
GSMUA_AchrUn_...	Banana	cytosol	15.86	34.51
GSMUA_Achr8P17430_001	Banana	cytosol	33.98	34.31
GSMUA_Achr9P14750_001	Banana	cytosol	34.95	34.18
GSMUA_Achr10P...	Banana	cytosol	34.63	33.86
GSMUA_AchrUn_...	Banana	cytosol	15.53	33.8
GSMUA_Achr3P07580_001	Banana	plastid	25.24	29.0
GSMUA_Achr2P06920_001	Banana	cytosol	33.01	28.1
GSMUA_Achr10P...	Banana	cytosol	22.33	22.48
GSMUA_Achr3P07590_001	Banana	cytosol	3.24	13.33

Protein Annotations

Gene3D:1.10.220.10	MapMan:35.1	InterPro:Annexin	InterPro:Annexin_repeat	InterPro:Annexin_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003729	GO:GO:0005488	GO:GO:0005509	GO:GO:0005544
GO:GO:0005575	GO:GO:0006950	GO:GO:0006970	GO:GO:0008150	GO:GO:0008289	GO:GO:0009408
GO:GO:0009409	GO:GO:0009414	GO:GO:0009506	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719
GO:GO:0009737	EnsemblPlantsGene:GSMUA_Achr3G17520_001	EnsemblPlants:GSMUA_Achr3P17520_001	EnsemblPlants:GSMUA_Achr3T17520_001	InterPro:IPR037104	UniProt:M0SFG8
PFAM:PF00191	PRINTS:PR00196	PANTHER:PTHR10502	PANTHER:PTHR10502:SF104	SMART:SM00335	SUPFAM:SSF47874
UniParc:UPI000296DC2D	:	:	:	:	:

Description

Putative Annexin D4 [Source:GMGC_GENE;Acc:GSMUA_Achr3G17520_001]

Coordinates

chr3:+:19073950..19076094

Molecular Weight (calculated)

35247.7 Da

IEP (calculated)

7.676

GRAVY (calculated)

-0.475

Length

309 amino acids

Sequence
(BLAST)

001: MAEEHEALTS AFSGLGVDES SLLTVITKWR KQPEKRRGFR SSSPFFKPHG SFERCEDDFV RSLKVEFARF KNVTVLWAMH PWERDARWIH HVLHKAHPFN
101: IIVEIACTRS SDELLGARKA YHALFHHSIE EDVAYRVKEN YCSLLVGLVS AYRYEGSRVD EDIAKSEAKA LGHAIKNAGT KDPVENYEVI RILTTRSKTH
201: LKETFRHYSG IYGQSIEQDF ADESCLGETV RCLGSSASYF SKVIDKAFGE EADKNAKDAL TRVVVSRSDV DMEEIKAVYE KQYKAKLEDK IVKNTRGNYR
301: DALLSLVGM

Best Arabidopsis Sequence Match ( AT2G38750.1 )
(BLAST)

001: MALPLELESL TEAISAGMGM GVDENALIST LGKSQKEHRK LFRKASKSFF VEDEERAFEK CHDHFVRHLK LEFSRFNTAV VMWAMHPWER DARLVKKALK
101: KGEEAYNLIV EVSCTRSAED LLGARKAYHS LFDQSMEEDI ASHVHGPQRK LLVGLVSAYR YEGNKVKDDS AKSDAKILAE AVASSGEEAV EKDEVVRILT
201: TRSKLHLQHL YKHFNEIKGS DLLGGVSKSS LLNEALICLL KPALYFSKIL DASLNKDADK TTKKWLTRVF VTRADHSDEM NEIKEEYNNL YGETLAQRIQ
301: EKIKGNYRDF LLTLLSKSD

Arabidopsis Description

ANN4Annexin D4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.