Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS2A01G403300.2 | |
| TraesCS2B01G421200.3 | |
| TraesCS2D01G400400.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G38750.1 | TraesCS2A01G403300.2 | AT2G02090.1 | 21798944 |
| AT2G38750.1 | TraesCS2B01G421200.3 | AT2G02090.1 | 21798944 |
| AT2G38750.1 | TraesCS2D01G400400.1 | AT2G02090.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G239800.2 | Wheat | cytosol | 95.87 | 95.87 |
| TraesCS1B01G251800.1 | Wheat | cytosol | 94.6 | 94.6 |
| HORVU1Hr1G057170.11 | Barley | cytosol | 94.29 | 80.49 |
| Os05t0382600-02 | Rice | nucleus | 79.68 | 78.68 |
| KXG21898 | Sorghum | cytosol | 80.32 | 77.37 |
| Zm00001d038065_P001 | Maize | cytosol | 73.33 | 71.3 |
| GSMUA_Achr3P17520_001 | Banana | cytosol | 59.05 | 60.19 |
| TraesCS4A01G023400.1 | Wheat | plastid | 59.37 | 50.95 |
| KRH13431 | Soybean | cytosol, nucleus | 50.48 | 50.64 |
| VIT_13s0019g00750.t01 | Wine grape | cytosol | 50.48 | 50.64 |
| KRH20781 | Soybean | cytosol | 49.84 | 50.0 |
| VIT_13s0139g00480.t01 | Wine grape | cytosol | 29.52 | 48.95 |
| PGSC0003DMT400050067 | Potato | cytosol | 45.4 | 45.25 |
| Solyc01g097520.2.1 | Tomato | nucleus | 44.76 | 44.62 |
| AT2G38750.1 | Thale cress | cytosol | 44.13 | 43.57 |
| Solyc01g097550.2.1 | Tomato | cytosol | 42.86 | 43.13 |
| VIT_13s0139g00420.t01 | Wine grape | cytosol | 33.33 | 42.68 |
| VIT_00s0131g00350.t01 | Wine grape | cytosol | 43.49 | 42.55 |
| CDX93305 | Canola | cytosol | 41.9 | 41.25 |
| CDY14436 | Canola | cytosol | 40.95 | 40.95 |
| VIT_00s0131g00310.t01 | Wine grape | cytosol | 41.59 | 40.68 |
| CDY07704 | Canola | cytosol | 40.63 | 40.63 |
| Bra017103.1-P | Field mustard | cytosol | 41.27 | 40.62 |
| CDY18369 | Canola | cytosol | 41.27 | 40.62 |
| VIT_00s0201g00090.t01 | Wine grape | cytosol | 21.9 | 40.59 |
| Bra000090.1-P | Field mustard | cytosol | 40.32 | 40.32 |
| VIT_00s0631g00010.t01 | Wine grape | cytosol | 12.7 | 36.36 |
| TraesCS4A01G023300.1 | Wheat | cytosol | 26.67 | 35.9 |
| TraesCS7A01G180100.1 | Wheat | cytosol, golgi, unclear | 35.24 | 35.35 |
| TraesCS6A01G300400.1 | Wheat | golgi, unclear | 35.24 | 35.24 |
| TraesCS2A01G129800.1 | Wheat | cytosol | 34.6 | 33.33 |
| TraesCS2A01G373800.1 | Wheat | mitochondrion | 32.06 | 30.42 |
| TraesCS1A01G073900.1 | Wheat | cytosol | 27.3 | 27.22 |
| TraesCS1A01G239700.2 | Wheat | cytosol | 32.7 | 26.68 |
| TraesCS3A01G484400.1 | Wheat | plastid | 27.3 | 23.06 |
| TraesCS5A01G203000.1 | Wheat | cytosol | 25.71 | 21.09 |
| TraesCS5A01G235600.1 | Wheat | cytosol | 20.32 | 19.88 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G239600.1 | EnsemblPlantsGene:TraesCS1A01G239600 | Gene3D:1.10.220.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005544 | GO:GO:0008289 | InterPro:Annexin_repeat | InterPro:Annexin_sf | InterPro:IPR037104 | PANTHER:PTHR10502 |
| PANTHER:PTHR10502:SF124 | PFAM:PF00191 | SEG:seg | SMART:SM00335 | SUPFAM:SSF47874 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1A:-:426881257..426882438
Molecular Weight (calculated)
34882.8 Da
IEP (calculated)
7.451
GRAVY (calculated)
-0.272
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEVQALTK AFSGLGGLGV DEPTMVAALA NWRRQPEKRS GFRRSFPGLF KEQGVIERCE DEYMLRLAAE FSRFKNLMVL WAMHPWERDA RLAHHVLHQA
101: HPAAILVEVA CTRSAEELLG ARKAYMALFH HSLEEDVAYR AKDKPYCSLL VGLVSAYRYE GPKVSDDTAK AEAKALGAAV KGAGGGRLVE NEEVVRILTT
201: RSKPHLVQTF KYYKELHGKH IQEDLGSEEA LREAVRCLAT PERYFSQVMA AALREGADHH GKEALARVAV TRSDVDMDAI RAAYQEQFGA KLEDAVAGSA
301: HGHFKDAIVS LIVGK
101: HPAAILVEVA CTRSAEELLG ARKAYMALFH HSLEEDVAYR AKDKPYCSLL VGLVSAYRYE GPKVSDDTAK AEAKALGAAV KGAGGGRLVE NEEVVRILTT
201: RSKPHLVQTF KYYKELHGKH IQEDLGSEEA LREAVRCLAT PERYFSQVMA AALREGADHH GKEALARVAV TRSDVDMDAI RAAYQEQFGA KLEDAVAGSA
301: HGHFKDAIVS LIVGK
001: MALPLELESL TEAISAGMGM GVDENALIST LGKSQKEHRK LFRKASKSFF VEDEERAFEK CHDHFVRHLK LEFSRFNTAV VMWAMHPWER DARLVKKALK
101: KGEEAYNLIV EVSCTRSAED LLGARKAYHS LFDQSMEEDI ASHVHGPQRK LLVGLVSAYR YEGNKVKDDS AKSDAKILAE AVASSGEEAV EKDEVVRILT
201: TRSKLHLQHL YKHFNEIKGS DLLGGVSKSS LLNEALICLL KPALYFSKIL DASLNKDADK TTKKWLTRVF VTRADHSDEM NEIKEEYNNL YGETLAQRIQ
301: EKIKGNYRDF LLTLLSKSD
101: KGEEAYNLIV EVSCTRSAED LLGARKAYHS LFDQSMEEDI ASHVHGPQRK LLVGLVSAYR YEGNKVKDDS AKSDAKILAE AVASSGEEAV EKDEVVRILT
201: TRSKLHLQHL YKHFNEIKGS DLLGGVSKSS LLNEALICLL KPALYFSKIL DASLNKDADK TTKKWLTRVF VTRADHSDEM NEIKEEYNNL YGETLAQRIQ
301: EKIKGNYRDF LLTLLSKSD
Arabidopsis Description
ANN4Annexin D4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.