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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
nucleus: 19621931
msms PMID: 19621931 doi
T Aki, S Yanagisawa
Department of Applied Biological Chemistry, The University of Tokyo, Japan.
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G239800.2 Wheat cytosol 81.82 82.86
TraesCS1B01G251800.1 Wheat cytosol 80.88 81.9
TraesCS1A01G239600.1 Wheat cytosol 78.68 79.68
KXG21898 Sorghum cytosol 80.88 78.9
Zm00001d038065_P001 Maize cytosol 74.61 73.46
HORVU1Hr1G057170.11 Barley cytosol 80.56 69.65
GSMUA_Achr3P17520_001 Banana cytosol 57.99 59.87
VIT_13s0139g00480.t01 Wine grape cytosol 31.03 52.11
VIT_13s0019g00750.t01 Wine grape cytosol 50.47 51.27
KRH13431 Soybean cytosol, nucleus 46.71 47.45
KRH20781 Soybean cytosol 46.4 47.13
AT2G38750.1 Thale cress cytosol 46.08 46.08
PGSC0003DMT400050067 Potato cytosol 43.89 44.3
Solyc01g097520.2.1 Tomato nucleus 43.26 43.67
CDY07704 Canola cytosol 42.95 43.49
Bra000090.1-P Field mustard cytosol 42.63 43.17
CDY14436 Canola cytosol 42.63 43.17
CDX93305 Canola cytosol 42.95 42.81
VIT_00s0131g00350.t01 Wine grape cytosol 42.95 42.55
CDY18369 Canola cytosol 42.32 42.19
Bra017103.1-P Field mustard cytosol 42.32 42.19
VIT_00s0201g00090.t01 Wine grape cytosol 22.26 41.76
Solyc01g097550.2.1 Tomato cytosol 40.75 41.53
VIT_13s0139g00420.t01 Wine grape cytosol 31.97 41.46
VIT_00s0131g00310.t01 Wine grape cytosol 40.75 40.37
VIT_00s0631g00010.t01 Wine grape cytosol 13.48 39.09
Os06t0221200-01 Rice plasma membrane, plastid 36.05 36.28
Os02t0753800-01 Rice cytosol, plasma membrane 34.8 35.35
Os07t0659600-00 Rice cytosol, plastid 31.97 30.82
Os01t0497400-00 Rice cytosol 21.32 30.49
Os08t0425700-01 Rice cytosol 29.47 29.28
Os05t0382900-01 Rice plasma membrane 32.6 27.96
Os09t0394900-01 Rice plasma membrane 26.02 26.35
Os09t0453300-01 Rice cytosol 22.26 22.26
Protein Annotations
Gene3D:1.10.220.10MapMan:35.1EntrezGene:4338644EMBL:AK060054EMBL:AK098879EMBL:AK104639
InterPro:Annexin_repeatInterPro:Annexin_sfUniProt:B7E4J4ProteinID:BAS93782.1GO:GO:0003674GO:GO:0003676
GO:GO:0003723GO:GO:0003729GO:GO:0005488GO:GO:0005509GO:GO:0005544GO:GO:0005575
GO:GO:0006950GO:GO:0006970GO:GO:0008150GO:GO:0008289GO:GO:0009408GO:GO:0009409
GO:GO:0009414GO:GO:0009506GO:GO:0009628GO:GO:0009651GO:GO:0009719GO:GO:0009737
GO:GO:0016020GO:GO:0016021InterPro:IPR037104EnsemblPlantsGene:Os05g0382600EnsemblPlants:Os05t0382600-02PFAM:PF00191
PANTHER:PTHR10502PANTHER:PTHR10502:SF124SMART:SM00335SUPFAM:SSF47874UniParc:UPI000188AC96RefSeq:XP_015637627.1
SEG:seg:::::
Description
ANNEXIN 3Similar to Annexin-like protein RJ4. (Os05t0382600-02);Annexin family protein. (Os05t0382600-03)
Coordinates
chr5:-:18494334..18496011
Molecular Weight (calculated)
35371.1 Da
IEP (calculated)
6.966
GRAVY (calculated)
-0.261
Length
319 amino acids
Sequence
(BLAST)
001: MADEIQHLTR AFSGLGGLGV DEPAMVSALA KWRRQPEKLS GFRKSFNGFF KDHGGVIEKC EEEYMLHLAA EFSRFKNLMV MWAMHPWERD ARLAHHVLHQ
101: AHPAAIVVEI ACTRTAEELL GARKAYQALF HHSLEEDVAY RARDKPYCGL LVGLVSAYRY EGPRVSEETA RAEAKALVAA VKSAGHAAAK LVENDDVVRI
201: LTTRSKPHLV ETFKHYKEIH GRHIEEDLGH EETLREAALC LATPARYFSE VVAAAVSDGA DHHAKEALTR VAVTRADVDM DAIRAAYHEQ FGGRLEDAVA
301: GKAHGYYRDA LLSLVAGGK
Best Arabidopsis Sequence Match ( AT2G38750.1 )
(BLAST)
001: MALPLELESL TEAISAGMGM GVDENALIST LGKSQKEHRK LFRKASKSFF VEDEERAFEK CHDHFVRHLK LEFSRFNTAV VMWAMHPWER DARLVKKALK
101: KGEEAYNLIV EVSCTRSAED LLGARKAYHS LFDQSMEEDI ASHVHGPQRK LLVGLVSAYR YEGNKVKDDS AKSDAKILAE AVASSGEEAV EKDEVVRILT
201: TRSKLHLQHL YKHFNEIKGS DLLGGVSKSS LLNEALICLL KPALYFSKIL DASLNKDADK TTKKWLTRVF VTRADHSDEM NEIKEEYNNL YGETLAQRIQ
301: EKIKGNYRDF LLTLLSKSD
Arabidopsis Description
ANN4Annexin D4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.