Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os05t0524400-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G02090.1 | Os05t0524400-01 | AT5G56630.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0352450-00 | Rice | nucleus | 5.32 | 10.02 |
| Os06t0255200-02 | Rice | cytosol, nucleus, plastid | 4.74 | 6.28 |
| Os05t0144300-01 | Rice | nucleus | 6.59 | 5.05 |
| VIT_01s0010g02080.t01 | Wine grape | cytosol | 2.89 | 3.43 |
| Os09t0442700-01 | Rice | cytosol | 3.35 | 3.43 |
| Os03t0722400-01 | Rice | cytosol | 3.01 | 3.06 |
| KRG89166 | Soybean | nucleus | 2.66 | 3.06 |
| KRH49484 | Soybean | nucleus | 2.66 | 3.05 |
| Os01t0881000-00 | Rice | nucleus | 3.82 | 3.0 |
| Os04t0566100-00 | Rice | cytosol | 2.77 | 2.78 |
| Solyc02g014770.2.1 | Tomato | nucleus | 1.97 | 2.3 |
| AT2G02090.1 | Thale cress | cytosol, plastid | 1.97 | 2.23 |
| Os05t0150300-01 | Rice | nucleus | 2.89 | 2.16 |
| CDY04120 | Canola | cytosol | 1.73 | 1.97 |
| Bra017422.1-P | Field mustard | cytosol | 1.73 | 1.97 |
| CDY48619 | Canola | nucleus, plastid | 1.73 | 1.96 |
| Os01t0367900-01 | Rice | nucleus | 2.43 | 1.9 |
| Os07t0497100-01 | Rice | nucleus | 3.47 | 1.33 |
| Os03t0352500-01 | Rice | nucleus | 0.0 | 0.0 |
| Os06t0183800-01 | Rice | cytosol, nucleus | 0.0 | 0.0 |
| Os02t0689800-01 | Rice | nucleus | 0.0 | 0.0 |
| Os07t0660200-01 | Rice | nucleus | 0.0 | 0.0 |
| Os02t0114000-01 | Rice | cytosol, nucleus | 0.0 | 0.0 |
| PGSC0003DMT400011842 | Potato | nucleus | 0.0 | 0.0 |
| Zm00001d015595_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A0P0VDV3 | ProteinID:BAS76634.1 | InterPro:BRM | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008094 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 |
| GO:GO:0040029 | GO:GO:0043044 | InterPro:Gln-Leu-Gln_QLQ | InterPro:IPR014978 | EnsemblPlantsGene:Os02g0114033 | EnsemblPlants:Os02t0114033-00 |
| PFAM:PF08880 | PFscan:PS51666 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF577 | SMART:SM00951 | UniParc:UPI0003938781 |
| SEG:seg | : | : | : | : | : |
Description
Glutamine-Leucine-Glutamine, QLQ domain containing protein. (Os02t0114033-00)
Coordinates
chr2:-:755937..759433
Molecular Weight (calculated)
95521.9 Da
IEP (calculated)
10.401
GRAVY (calculated)
-0.886
Length
865 amino acids
Sequence
(BLAST)
(BLAST)
001: AMMHHHDQQQ QQQQGYPSGA PHGMMGGGGS SSFPPSSGPM PPFQGQRNMP LPGGPQGLAG GQQHNPTAMQ QAYLQYMMQQ QQQKAHGMLL QQQQQAKMNM
101: AGPSTRDQDV AANTAKMQEL MSLQAQAQAQ MFKRQQSEHL QQAEKQAEQG QPSNSEQRSG DMRPPSMPPQ GVPGQQLSSA GMVRPMQPMQ GQAGMSNAGA
201: NPMAMAQLQA IQAWAKEHNV DLSNPANVTL ISQILPMLQS NRMAAMQKQN EVGMASQQQS VPSQMNNDAP GHSNFPSQGA PSKPRQPLPP STSVSGGAEP
301: KMMNMSNMQM QQQLAAHNRD SSNDRAARPA MSMGNGGQMM HMPQSSGHAN KIPEQPNPKN ANSEAMQMQY ARQLQQANRA TAPSANSGET GGSQAPNQAA
401: RPPMGFTKHQ LHVLKAQILA FRRLKRGDKK LPPEVLDLIM SGPPPDSQAQ QVSGPPVTNR ERSATSSADE HGRPVESGGI APERSSLLKA PCLPKVEVSA
501: PEDKTIPASG PMQVMKASPK EPLRIGPVSM PEQTNTTLIK SEQDPERGIQ RTPGRSDYNG ERGKSLPAES GSADAEQAKR AASSSSVPTP NRDVSRKYHG
601: PLFDFPSFTR KHDSMVSANY NSNLALGYDV KDLLAQEGMI VLGKKREDNL KKISGLLAIN LERKRIQPDL VLRLQIEEKK LKLLEFQARM RDEVEQEQQE
701: IMAMPDRVYR KFVRQCERQR VELTRQVQQM QKASREKQLK SIFQWRKKLL EAHWAIRDAR ITRNRGVAKY HERMLREFSK KKDDDRNKRM EALKNNDVER
801: YRQILLEQQT SVPGDAAQRY NVLSSFLTQT EEYLYKLGGK ITAAKNHQQV EEAANAAAAA ARAQV
101: AGPSTRDQDV AANTAKMQEL MSLQAQAQAQ MFKRQQSEHL QQAEKQAEQG QPSNSEQRSG DMRPPSMPPQ GVPGQQLSSA GMVRPMQPMQ GQAGMSNAGA
201: NPMAMAQLQA IQAWAKEHNV DLSNPANVTL ISQILPMLQS NRMAAMQKQN EVGMASQQQS VPSQMNNDAP GHSNFPSQGA PSKPRQPLPP STSVSGGAEP
301: KMMNMSNMQM QQQLAAHNRD SSNDRAARPA MSMGNGGQMM HMPQSSGHAN KIPEQPNPKN ANSEAMQMQY ARQLQQANRA TAPSANSGET GGSQAPNQAA
401: RPPMGFTKHQ LHVLKAQILA FRRLKRGDKK LPPEVLDLIM SGPPPDSQAQ QVSGPPVTNR ERSATSSADE HGRPVESGGI APERSSLLKA PCLPKVEVSA
501: PEDKTIPASG PMQVMKASPK EPLRIGPVSM PEQTNTTLIK SEQDPERGIQ RTPGRSDYNG ERGKSLPAES GSADAEQAKR AASSSSVPTP NRDVSRKYHG
601: PLFDFPSFTR KHDSMVSANY NSNLALGYDV KDLLAQEGMI VLGKKREDNL KKISGLLAIN LERKRIQPDL VLRLQIEEKK LKLLEFQARM RDEVEQEQQE
701: IMAMPDRVYR KFVRQCERQR VELTRQVQQM QKASREKQLK SIFQWRKKLL EAHWAIRDAR ITRNRGVAKY HERMLREFSK KKDDDRNKRM EALKNNDVER
801: YRQILLEQQT SVPGDAAQRY NVLSSFLTQT EEYLYKLGGK ITAAKNHQQV EEAANAAAAA ARAQV
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.