Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d038775_P002 | |
| Zm00001d043563_P002 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G02090.1 | Zm00001d038775_P002 | AT5G56630.1 | 21798944 |
| AT2G02090.1 | Zm00001d043563_P002 | AT5G56630.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002656_P002 | Maize | nucleus | 92.39 | 18.59 |
| VIT_01s0010g02080.t01 | Wine grape | cytosol | 60.91 | 16.48 |
| CDY04120 | Canola | cytosol | 63.45 | 16.45 |
| Bra017422.1-P | Field mustard | cytosol | 63.45 | 16.4 |
| AT2G02090.1 | Thale cress | cytosol, plastid | 63.45 | 16.38 |
| KRG89166 | Soybean | nucleus | 62.44 | 16.36 |
| CDY48619 | Canola | nucleus, plastid | 63.45 | 16.34 |
| Solyc02g014770.2.1 | Tomato | nucleus | 60.91 | 16.26 |
| KRH49484 | Soybean | nucleus | 61.42 | 16.05 |
| Zm00001d007978_P003 | Maize | cytosol | 16.24 | 4.06 |
| Zm00001d033827_P006 | Maize | cytosol | 16.24 | 3.77 |
| Zm00001d048552_P005 | Maize | cytosol | 16.24 | 3.54 |
| Zm00001d024816_P007 | Maize | cytosol | 18.78 | 3.33 |
| Zm00001d006798_P002 | Maize | nucleus | 18.27 | 3.23 |
| Zm00001d009312_P028 | Maize | nucleus | 16.75 | 2.92 |
| Zm00001d040831_P021 | Maize | nucleus | 16.24 | 2.86 |
| Zm00001d029180_P002 | Maize | nucleus | 21.83 | 2.82 |
| Zm00001d047471_P002 | Maize | nucleus | 22.34 | 2.81 |
| Zm00001d045109_P008 | Maize | cytosol | 15.23 | 2.25 |
| Zm00001d051507_P007 | Maize | nucleus | 21.83 | 2.09 |
| Zm00001d017660_P021 | Maize | nucleus | 20.81 | 1.99 |
| Zm00001d022405_P051 | Maize | nucleus | 14.72 | 1.68 |
| Zm00001d007089_P003 | Maize | nucleus | 14.72 | 1.67 |
| Zm00001d006428_P002 | Maize | nucleus | 16.75 | 1.51 |
| Zm00001d021541_P002 | Maize | nucleus | 16.75 | 1.48 |
| Zm00001d014977_P002 | Maize | nucleus | 15.23 | 1.39 |
| Zm00001d037346_P007 | Maize | nucleus | 17.26 | 0.89 |
| PGSC0003DMT400011842 | Potato | nucleus | 0.0 | 0.0 |
| Os02t0114000-01 | Rice | cytosol, nucleus | 0.0 | 0.0 |
| Os02t0114033-00 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d015595_P001 | EnsemblPlants:Zm00001d015595_T001 | EnsemblPlantsGene:Zm00001d015595 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF845 | ProteinID:AQK69160.1 |
| UniParc:UPI000844D408 | UniProt:A0A1D6H2U7 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5:-:100228803..100230103
Molecular Weight (calculated)
22473.3 Da
IEP (calculated)
9.278
GRAVY (calculated)
-0.069
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MMPDIFATGD VDLKKLLNAE DRELISQIKS ILGPFILRRL KSNVKFVVMG TEQSEAYKNA INEYRAACQA RSAKSSDGIS NNIAGLIPKR QISNYFTQFR
101: KIANHPLVIR CIYGDKDVDR IARLLYPKGA FGFECSLERA IQELKNYSDF NIHQLLLSYG DVGTKGALKD EHVFASAKCQ VYFFLQHLFL YVLLFYL
101: KIANHPLVIR CIYGDKDVDR IARLLYPKGA FGFECSLERA IQELKNYSDF NIHQLLLSYG DVGTKGALKD EHVFASAKCQ VYFFLQHLFL YVLLFYL
001: MKRDFDEISE EEWSQHSFNA SRVLKRPRTP KKTRAATNPT PSIESFAFRR PSTAMTIESN SSDGDCVEIE DLGDSDSDVK IVNGEDLLLE DEEEVEETKV
101: VMRAARVGRR FVIEDEEASD DDDDEAESSA SEDEFGGGGG GSGGRRGEDE DVVGKALQKC AKISADLRKE LYGTSSGVTD RYSEVETSTV RIVTQNDIDD
201: ACKAEDSDFQ PILKPYQLVG VNFLLLLYKK GIEGAILADE MGLGKTIQAI TYLTLLSRLN NDPGPHLVVC PASVLENWER ELRKWCPSFT VLQYHGAARA
301: AYSRELNSLS KAGKPPPFNV LLVCYSLFER HSEQQKDDRK VLKRWRWSCV LMDEAHALKD KNSYRWKNLM SVARNANQRL MLTGTPLQND LHELWSLLEF
401: MLPDIFTTEN VDLKKLLNAE DTELITRMKS ILGPFILRRL KSDVMQQLVP KIQRVEYVLM ERKQEDAYKE AIEEYRAASQ ARLVKLSSKS LNSLAKALPK
501: RQISNYFTQF RKIANHPLLI RRIYSDEDVI RIARKLHPIG AFGFECSLDR VIEEVKGFND FRIHQLLFQY GVNDTKGTLS DKHVMLSAKC RTLAELLPSM
601: KKSGHRVLIF SQWTSMLDIL EWTLDVIGVT YRRLDGSTQV TDRQTIVDTF NNDKSIFACL LSTRAGGQGL NLTGADTVII HDMDFNPQID RQAEDRCHRI
701: GQTKPVTIFR LVTKSTVDEN IYEIAKRKLV LDAAVLESGV HVDDNGDTPE KTMGEILASL LMG
101: VMRAARVGRR FVIEDEEASD DDDDEAESSA SEDEFGGGGG GSGGRRGEDE DVVGKALQKC AKISADLRKE LYGTSSGVTD RYSEVETSTV RIVTQNDIDD
201: ACKAEDSDFQ PILKPYQLVG VNFLLLLYKK GIEGAILADE MGLGKTIQAI TYLTLLSRLN NDPGPHLVVC PASVLENWER ELRKWCPSFT VLQYHGAARA
301: AYSRELNSLS KAGKPPPFNV LLVCYSLFER HSEQQKDDRK VLKRWRWSCV LMDEAHALKD KNSYRWKNLM SVARNANQRL MLTGTPLQND LHELWSLLEF
401: MLPDIFTTEN VDLKKLLNAE DTELITRMKS ILGPFILRRL KSDVMQQLVP KIQRVEYVLM ERKQEDAYKE AIEEYRAASQ ARLVKLSSKS LNSLAKALPK
501: RQISNYFTQF RKIANHPLLI RRIYSDEDVI RIARKLHPIG AFGFECSLDR VIEEVKGFND FRIHQLLFQY GVNDTKGTLS DKHVMLSAKC RTLAELLPSM
601: KKSGHRVLIF SQWTSMLDIL EWTLDVIGVT YRRLDGSTQV TDRQTIVDTF NNDKSIFACL LSTRAGGQGL NLTGADTVII HDMDFNPQID RQAEDRCHRI
701: GQTKPVTIFR LVTKSTVDEN IYEIAKRKLV LDAAVLESGV HVDDNGDTPE KTMGEILASL LMG
Arabidopsis Description
ETL1ETL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWA6]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.