Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG19483 | Sorghum | cytosol | 93.48 | 94.18 |
| TraesCS7B01G050100.3 | Wheat | nucleus | 77.66 | 76.46 |
| TraesCS7A01G147100.2 | Wheat | nucleus | 77.66 | 76.23 |
| TraesCS7D01G148900.4 | Wheat | nucleus | 76.24 | 72.38 |
| Solyc08g029120.1.1 | Tomato | nucleus | 33.81 | 63.88 |
| GSMUA_Achr4P21270_001 | Banana | cytosol | 60.49 | 58.52 |
| KRH05279 | Soybean | nucleus | 19.79 | 58.28 |
| CDY56279 | Canola | cytosol | 55.47 | 55.1 |
| Bra007814.1-P | Field mustard | nucleus | 55.77 | 54.51 |
| KRH61691 | Soybean | nucleus | 57.95 | 53.61 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 55.1 | 53.42 |
| VIT_04s0008g05880.t01 | Wine grape | nucleus | 58.7 | 53.19 |
| KRH52357 | Soybean | nucleus | 57.12 | 52.92 |
| AT2G25170.3 | Thale cress | endoplasmic reticulum | 55.7 | 52.7 |
| CDX75208 | Canola | cytosol | 45.73 | 51.0 |
| Solyc06g065730.2.1 | Tomato | nucleus | 54.57 | 50.66 |
| CDX68802 | Canola | cytosol | 45.88 | 50.41 |
| Bra011311.1-P | Field mustard | nucleus | 45.88 | 50.41 |
| AT4G31900.1 | Thale cress | nucleus | 42.95 | 47.67 |
| Zm00001d007978_P003 | Maize | cytosol | 17.09 | 28.93 |
| Zm00001d033827_P006 | Maize | cytosol | 16.79 | 26.42 |
| Zm00001d040831_P021 | Maize | nucleus | 20.76 | 24.73 |
| Zm00001d009312_P028 | Maize | nucleus | 20.84 | 24.6 |
| Zm00001d048552_P005 | Maize | cytosol | 16.42 | 24.23 |
| Zm00001d024816_P007 | Maize | cytosol | 18.74 | 22.52 |
| Zm00001d006798_P002 | Maize | nucleus | 18.82 | 22.49 |
| Zm00001d002656_P002 | Maize | nucleus | 14.02 | 19.1 |
| Zm00001d022405_P051 | Maize | nucleus | 23.99 | 18.56 |
| Zm00001d007089_P003 | Maize | nucleus | 21.89 | 16.81 |
| Zm00001d006428_P002 | Maize | nucleus | 26.01 | 15.84 |
| Zm00001d021541_P002 | Maize | nucleus | 26.24 | 15.73 |
| Zm00001d029180_P002 | Maize | nucleus | 17.47 | 15.28 |
| Zm00001d015595_P001 | Maize | cytosol | 2.25 | 15.23 |
| Zm00001d047471_P002 | Maize | nucleus | 17.77 | 15.12 |
| Zm00001d017660_P021 | Maize | nucleus | 19.94 | 12.9 |
| Zm00001d051507_P007 | Maize | nucleus | 19.87 | 12.86 |
| Zm00001d014977_P002 | Maize | nucleus | 18.07 | 11.14 |
| Zm00001d037346_P007 | Maize | nucleus | 19.57 | 6.85 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103637982 | MapMan:12.4.1.1.5 | Gene3D:2.40.50.40 | Gene3D:3.30.40.10 | Gene3D:3.40.50.10810 |
| Gene3D:3.40.50.300 | UniProt:A0A1D6NTP5 | ProteinID:AQL01577.1 | InterPro:Chromo-like_dom_sf | InterPro:Chromo/chromo_shadow_dom | InterPro:Chromo_domain |
| ncoils:Coil | InterPro:DUF1086 | InterPro:DUF1087 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000953 | InterPro:IPR001650 |
| InterPro:IPR013083 | InterPro:IPR014001 | InterPro:IPR019787 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFAM:PF00385 | PFAM:PF06461 | PFAM:PF06465 | ScanProsite:PS01359 | PFscan:PS50013 |
| PFscan:PS50016 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF853 | SMART:SM00249 |
| SMART:SM00298 | SMART:SM00487 | SMART:SM00490 | SMART:SM01146 | SMART:SM01147 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | SUPFAM:SSF52540 | SUPFAM:SSF54160 | UniParc:UPI00084320AA | InterPro:Zinc_finger_PHD-type_CS | EnsemblPlantsGene:Zm00001d045109 |
| EnsemblPlants:Zm00001d045109_P008 | EnsemblPlants:Zm00001d045109_T008 | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
Putative homeodomain-like transcription factor superfamily protein
Coordinates
chr9:+:13084856..13105514
Molecular Weight (calculated)
153590.0 Da
IEP (calculated)
6.121
GRAVY (calculated)
-0.675
Length
1334 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLVERLRV RSERRPRYAL DESDDDLPLR VGAGKGKDQQ NDAPAERIER EDAKEEACQR CGKSDNLVSC STCTYKFHRK CLVPCLNITS DKWSCPECVS
0101: PLTEMERILD IEVLEAPRED SSSTEPRSKK MERYLIKWKG LSYIHCSWVS EKEYSEAANI HPRLRTRLNN FRRQKEAMKI EAERSGEDIV AIRPEWTTVD
0201: RILASRYTGK NLVGDREYYV KWNELTYEEC TWENESDITV FQPEIERFNE IQFRRKKSGD KGKATREPRQ FKESPTFLSG GTLHPYQLEG LNFLRYSWFH
0301: NKRVILGDEM GLGKTIQSIA FLASLFEDKF GPHLVVAPLS TLRNWEREFA TWAPQMNVVM YFGAAASRDI IRKYEFYYPK EKLKKLKKKK SSPSNEDKKQ
0401: SRIRFDVLLT SYEMINMDSS ILKNIEWECL VVDEGHRLKN KDSKLFGQLK DYNTKHRVLL TGTPVQNNLD ELFMLMHFLE GESFGSITDL QEEFKDINQD
0501: KQIEKLHGML KPHLLRRFKK DVMKELPPKK ELILRVELTR KQKEYYKAIL TKNYEVLARR NGGHTSLINV VMELRKLCCH GFMIDEPDLE PANPEEGLRR
0601: LLDSSGKMQL LDKMMVKLKE QGHRVLIYSQ FQHMLDLLED YLSYRKWTYE RIDGKISGAD RQIRIDRFNA KNSTRFCFLL STRAGGLGIN LATADTVIIY
0701: DSDWNPHADL QAMARAHRLG QTSKVMIYRL VSRGTIEERM MQLTKKKILL EHLVVGRLTK ANNVNQEELD DIIRYGSKEL FEDENDESRQ IHYDEAAIER
0801: LLDRDQVDGD ESVEDEEEDG FLKGFKVANF EYIDEAKAQA EKEEARRKAA AEAENSERNY WDELLKDRYD VQKVEEHTAM GKGKRSRKQM AAADEDDIHD
0901: LSSEDEDYSL EDDISDNDTS LQGNISGKRG QYSKRKSRNV DSIPLMEGEG RTLRVLGFNH AQRAMFLQTL NRFGFQNYDW KEYLPRLKGK SVEEIQRYAE
1001: LVMAHLVEEI NDSDYFSDGV PKEMMRVDDV LVRIANISLI EEKMAATGPG KITNIFPNYL LYEFQGLSGG RIWKAEHDLL LLRGILKHGY ARWQYISDDR
1101: ENGLFEAARR ELHLPSVNEI IGAQLNEANG NLEGAQEGQA NTTSMSHYKE IQRKIVEFLR KRYHLMERAL NMEYAVIKKK IPVPDDITEQ GVPAGHAPFI
1201: PDISELLREL PNLEPISTNE LVSEGTAGQL QVPHLYNKMC GVLEESGAYA LSSFFGDKSA SSSLANSLRQ FETVCENVVE ALRPHQNGTG SAIKEELVDA
1301: ATKAAAAAAP QQDSGHDAPH GQSSTAKADM EIDG
0101: PLTEMERILD IEVLEAPRED SSSTEPRSKK MERYLIKWKG LSYIHCSWVS EKEYSEAANI HPRLRTRLNN FRRQKEAMKI EAERSGEDIV AIRPEWTTVD
0201: RILASRYTGK NLVGDREYYV KWNELTYEEC TWENESDITV FQPEIERFNE IQFRRKKSGD KGKATREPRQ FKESPTFLSG GTLHPYQLEG LNFLRYSWFH
0301: NKRVILGDEM GLGKTIQSIA FLASLFEDKF GPHLVVAPLS TLRNWEREFA TWAPQMNVVM YFGAAASRDI IRKYEFYYPK EKLKKLKKKK SSPSNEDKKQ
0401: SRIRFDVLLT SYEMINMDSS ILKNIEWECL VVDEGHRLKN KDSKLFGQLK DYNTKHRVLL TGTPVQNNLD ELFMLMHFLE GESFGSITDL QEEFKDINQD
0501: KQIEKLHGML KPHLLRRFKK DVMKELPPKK ELILRVELTR KQKEYYKAIL TKNYEVLARR NGGHTSLINV VMELRKLCCH GFMIDEPDLE PANPEEGLRR
0601: LLDSSGKMQL LDKMMVKLKE QGHRVLIYSQ FQHMLDLLED YLSYRKWTYE RIDGKISGAD RQIRIDRFNA KNSTRFCFLL STRAGGLGIN LATADTVIIY
0701: DSDWNPHADL QAMARAHRLG QTSKVMIYRL VSRGTIEERM MQLTKKKILL EHLVVGRLTK ANNVNQEELD DIIRYGSKEL FEDENDESRQ IHYDEAAIER
0801: LLDRDQVDGD ESVEDEEEDG FLKGFKVANF EYIDEAKAQA EKEEARRKAA AEAENSERNY WDELLKDRYD VQKVEEHTAM GKGKRSRKQM AAADEDDIHD
0901: LSSEDEDYSL EDDISDNDTS LQGNISGKRG QYSKRKSRNV DSIPLMEGEG RTLRVLGFNH AQRAMFLQTL NRFGFQNYDW KEYLPRLKGK SVEEIQRYAE
1001: LVMAHLVEEI NDSDYFSDGV PKEMMRVDDV LVRIANISLI EEKMAATGPG KITNIFPNYL LYEFQGLSGG RIWKAEHDLL LLRGILKHGY ARWQYISDDR
1101: ENGLFEAARR ELHLPSVNEI IGAQLNEANG NLEGAQEGQA NTTSMSHYKE IQRKIVEFLR KRYHLMERAL NMEYAVIKKK IPVPDDITEQ GVPAGHAPFI
1201: PDISELLREL PNLEPISTNE LVSEGTAGQL QVPHLYNKMC GVLEESGAYA LSSFFGDKSA SSSLANSLRQ FETVCENVVE ALRPHQNGTG SAIKEELVDA
1301: ATKAAAAAAP QQDSGHDAPH GQSSTAKADM EIDG
0001: MSSLVERLRI RSDRKPVYNL DDSDDDDFVP KKDRTFEQVE AIVRTDAKEN ACQACGESTN LVSCNTCTYA FHAKCLVPPL KDASVENWRC PECVSPLNEI
0101: DKILDCEMRP TKSSEQGSSD AEPKPIFVKQ YLVKWKGLSY LHCSWVPEKE FQKAYKSNHR LKTRVNNFHR QMESFNNSED DFVAIRPEWT TVDRILACRE
0201: EDGELEYLVK YKELSYDECY WESESDISTF QNEIQRFKDV NSRTRRSKDV DHKRNPRDFQ QFDHTPEFLK GLLHPYQLEG LNFLRFSWSK QTHVILADEM
0301: GLGKTIQSIA LLASLFEENL IPHLVIAPLS TLRNWEREFA TWAPQMNVVM YFGTAQARAV IREHEFYLSK DQKKIKKKKS GQISSESKQK RIKFDVLLTS
0401: YEMINLDSAV LKPIKWECMI VDEGHRLKNK DSKLFSSLTQ YSSNHRILLT GTPLQNNLDE LFMLMHFLDA GKFGSLEEFQ EEFKDINQEE QISRLHKMLA
0501: PHLLRRVKKD VMKDMPPKKE LILRVDLSSL QKEYYKAIFT RNYQVLTKKG GAQISLNNIM MELRKVCCHP YMLEGVEPVI HDANEAFKQL LESCGKLQLL
0601: DKMMVKLKEQ GHRVLIYTQF QHMLDLLEDY CTHKKWQYER IDGKVGGAER QIRIDRFNAK NSNKFCFLLS TRAGGLGINL ATADTVIIYD SDWNPHADLQ
0701: AMARAHRLGQ TNKVMIYRLI NRGTIEERMM QLTKKKMVLE HLVVGKLKTQ NINQEELDDI IRYGSKELFA SEDDEAGKSG KIHYDDAAID KLLDRDLVEA
0801: EEVSVDDEEE NGFLKAFKVA NFEYIDENEA AALEAQRVAA ESKSSAGNSD RASYWEELLK DKFELHQAEE LNALGKRKRS RKQLVSIEED DLAGLEDVSS
0901: DGDESYEAES TDGEAAGQGV QTGRRPYRRK GRDNLEPTPL MEGEGRSFRV LGFNQSQRAI FVQTLMRYGA GNFDWKEFVP RLKQKTFEEI NEYGILFLKH
1001: IAEEIDENSP TFSDGVPKEG LRIEDVLVRI ALLILVQEKV KFVEDHPGKP VFPSRILERF PGLRSGKIWK EEHDKIMIRA VLKHGYGRWQ AIVDDKELGI
1101: QELICKELNF PHISLSAAEQ AGLQGQNGSG GSNPGAQTNQ NPGSVITGNN NASADGAQVN SMFYYRDMQR RLVEFVKKRV LLLEKAMNYE YAEEYYGLGG
1201: SSSIPTEEPE AEPKIADTVG VSFIEVDDEM LDGLPKTDPI TSEEIMGAAV DNNQARVEIA QHYNQMCKLL DENARESVQA YVNNQPPSTK VNESFRALKS
1301: INGNINTILS ITSDQSKSHE DDTKPDLNNV EMKDTAEETK PLRGGVVDLN VVEGEENIAE ASGSVDVKME EAKEEEKPKN MVVD
0101: DKILDCEMRP TKSSEQGSSD AEPKPIFVKQ YLVKWKGLSY LHCSWVPEKE FQKAYKSNHR LKTRVNNFHR QMESFNNSED DFVAIRPEWT TVDRILACRE
0201: EDGELEYLVK YKELSYDECY WESESDISTF QNEIQRFKDV NSRTRRSKDV DHKRNPRDFQ QFDHTPEFLK GLLHPYQLEG LNFLRFSWSK QTHVILADEM
0301: GLGKTIQSIA LLASLFEENL IPHLVIAPLS TLRNWEREFA TWAPQMNVVM YFGTAQARAV IREHEFYLSK DQKKIKKKKS GQISSESKQK RIKFDVLLTS
0401: YEMINLDSAV LKPIKWECMI VDEGHRLKNK DSKLFSSLTQ YSSNHRILLT GTPLQNNLDE LFMLMHFLDA GKFGSLEEFQ EEFKDINQEE QISRLHKMLA
0501: PHLLRRVKKD VMKDMPPKKE LILRVDLSSL QKEYYKAIFT RNYQVLTKKG GAQISLNNIM MELRKVCCHP YMLEGVEPVI HDANEAFKQL LESCGKLQLL
0601: DKMMVKLKEQ GHRVLIYTQF QHMLDLLEDY CTHKKWQYER IDGKVGGAER QIRIDRFNAK NSNKFCFLLS TRAGGLGINL ATADTVIIYD SDWNPHADLQ
0701: AMARAHRLGQ TNKVMIYRLI NRGTIEERMM QLTKKKMVLE HLVVGKLKTQ NINQEELDDI IRYGSKELFA SEDDEAGKSG KIHYDDAAID KLLDRDLVEA
0801: EEVSVDDEEE NGFLKAFKVA NFEYIDENEA AALEAQRVAA ESKSSAGNSD RASYWEELLK DKFELHQAEE LNALGKRKRS RKQLVSIEED DLAGLEDVSS
0901: DGDESYEAES TDGEAAGQGV QTGRRPYRRK GRDNLEPTPL MEGEGRSFRV LGFNQSQRAI FVQTLMRYGA GNFDWKEFVP RLKQKTFEEI NEYGILFLKH
1001: IAEEIDENSP TFSDGVPKEG LRIEDVLVRI ALLILVQEKV KFVEDHPGKP VFPSRILERF PGLRSGKIWK EEHDKIMIRA VLKHGYGRWQ AIVDDKELGI
1101: QELICKELNF PHISLSAAEQ AGLQGQNGSG GSNPGAQTNQ NPGSVITGNN NASADGAQVN SMFYYRDMQR RLVEFVKKRV LLLEKAMNYE YAEEYYGLGG
1201: SSSIPTEEPE AEPKIADTVG VSFIEVDDEM LDGLPKTDPI TSEEIMGAAV DNNQARVEIA QHYNQMCKLL DENARESVQA YVNNQPPSTK VNESFRALKS
1301: INGNINTILS ITSDQSKSHE DDTKPDLNNV EMKDTAEETK PLRGGVVDLN VVEGEENIAE ASGSVDVKME EAKEEEKPKN MVVD
Arabidopsis Description
PKLchromatin remodeling factor CHD3 (PICKLE) [Source:TAIR;Acc:AT2G25170]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.