Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52357 | Soybean | nucleus | 96.12 | 96.25 |
| Solyc08g029120.1.1 | Tomato | nucleus | 39.74 | 81.16 |
| KRH05279 | Soybean | nucleus | 24.9 | 79.25 |
| VIT_04s0008g05880.t01 | Wine grape | nucleus | 77.67 | 76.09 |
| CDY56279 | Canola | cytosol | 63.73 | 68.43 |
| Solyc06g065730.2.1 | Tomato | nucleus | 67.82 | 68.06 |
| Bra007814.1-P | Field mustard | nucleus | 64.15 | 67.77 |
| AT2G25170.3 | Thale cress | endoplasmic reticulum | 65.05 | 66.52 |
| CDX76767 | Canola | cytosol, nucleus, plastid | 63.45 | 66.5 |
| GSMUA_Achr4P21270_001 | Banana | cytosol | 59.36 | 62.07 |
| CDX75208 | Canola | cytosol | 49.51 | 59.7 |
| CDX68802 | Canola | cytosol | 49.65 | 58.98 |
| KXG19483 | Sorghum | cytosol | 53.88 | 58.69 |
| Bra011311.1-P | Field mustard | nucleus | 49.38 | 58.65 |
| Zm00001d045109_P008 | Maize | cytosol | 53.61 | 57.95 |
| TraesCS7B01G050100.3 | Wheat | nucleus | 53.95 | 57.42 |
| TraesCS7A01G147100.2 | Wheat | nucleus | 53.81 | 57.1 |
| AT4G31900.1 | Thale cress | nucleus | 46.67 | 55.99 |
| TraesCS7D01G148900.4 | Wheat | nucleus | 52.91 | 54.31 |
| KRH28662 | Soybean | cytosol | 15.81 | 29.88 |
| KRH76800 | Soybean | cytosol | 15.67 | 29.66 |
| KRH02212 | Soybean | nucleus | 19.63 | 26.72 |
| KRH21031 | Soybean | nucleus | 19.76 | 26.71 |
| KRH50913 | Soybean | nucleus | 19.56 | 26.65 |
| KRG89166 | Soybean | nucleus | 13.87 | 26.6 |
| KRH11241 | Soybean | nucleus | 19.76 | 26.59 |
| KRH49484 | Soybean | nucleus | 13.87 | 26.53 |
| KRH75253 | Soybean | cytosol, nucleus, plastid | 15.95 | 26.2 |
| KRH35559 | Soybean | nucleus | 18.17 | 24.44 |
| KRG91253 | Soybean | nucleus | 18.17 | 24.42 |
| KRH27613 | Soybean | nucleus | 17.96 | 24.36 |
| KRH73568 | Soybean | nucleus | 14.15 | 20.94 |
| KRH14560 | Soybean | nucleus | 24.27 | 19.84 |
| KRH42374 | Soybean | nucleus | 26.63 | 17.74 |
| KRH33202 | Soybean | nucleus | 17.27 | 17.07 |
| KRH58495 | Soybean | nucleus | 27.25 | 16.83 |
| KRH66858 | Soybean | nucleus | 17.68 | 16.64 |
| KRG95191 | Soybean | nucleus | 17.55 | 16.53 |
| KRH71872 | Soybean | nucleus | 20.18 | 14.26 |
| KRH38118 | Soybean | nucleus | 19.97 | 14.06 |
| KRH02187 | Soybean | nucleus | 12.9 | 13.45 |
| KRH48113 | Soybean | nucleus | 17.89 | 11.59 |
| KRH06623 | Soybean | nucleus | 17.61 | 11.53 |
| KRH40427 | Soybean | nucleus | 17.75 | 11.52 |
| KRH00799 | Soybean | nucleus | 17.61 | 11.43 |
| KRH50934 | Soybean | nucleus | 20.46 | 7.79 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100790230 | MapMan:12.4.1.1.5 | Gene3D:2.40.50.40 | Gene3D:3.30.40.10 | Gene3D:3.40.50.10810 |
| Gene3D:3.40.50.300 | EMBL:ACUP02002181 | InterPro:CHD_C2 | InterPro:Chromo-like_dom_sf | InterPro:Chromo/chromo_shadow_dom | InterPro:Chromo_domain |
| ncoils:Coil | InterPro:DUF1086 | InterPro:DUF1087 | EnsemblPlantsGene:GLYMA_04G062400 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000953 | InterPro:IPR001650 |
| InterPro:IPR013083 | InterPro:IPR014001 | InterPro:IPR019787 | InterPro:IPR024934 | InterPro:IPR038718 | UniProt:K7KIF9 |
| EnsemblPlants:KRH61691 | ProteinID:KRH61691 | ProteinID:KRH61691.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 |
| PFAM:PF00385 | PFAM:PF00628 | PFAM:PF06461 | PFAM:PF06465 | PFAM:PF08074 | ScanProsite:PS01359 |
| PFscan:PS50013 | PFscan:PS50016 | PFscan:PS50903 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF853 | InterPro:Rubredoxin-like_dom | SMART:SM00249 | SMART:SM00298 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM01146 | SMART:SM01147 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | SUPFAM:SSF54160 |
| UniParc:UPI000295F869 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:5134682..5156284
Molecular Weight (calculated)
165250.0 Da
IEP (calculated)
5.196
GRAVY (calculated)
-0.665
Length
1442 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLVERLRV RSDRRPIYNL DESDDDADLL PRKSGTTQEK IERIERSDAK ENLCQACGEN ENLVSCGTCT YAYHPRCLLP PLKGPLPDNW RCPECVSPLN
0101: DIDKILDCEM RPTTAADNEA TKLGSKQIFV KQYLVKWKGL SYLHCTWVPE KEFLKAFKTH PRLKTKVNNF HQKMASVNTS DEDFVAIRPE WTTVDRILAC
0201: RGDDDEREYL VKWKELPYDE CYWEFESDIS AFQPEIERFN RLRSRSSKFS SSKQKNSVKD DAELKKQQKE FQHYEQSPEF LSGGTLHPYQ LEGLNFLRFS
0301: WSKQTHVILA DEMGLGKTIQ SIAFLASLFK EGVSPHLVVA PLSTLRNWER EFATWAPQMN VLMYVGSAQA RNVIREYEFY FPKKLKKIKK KKSGHLISES
0401: KQDRIKFDVL LTSYEMINFD TTSLKPIKWE CMIVDEGHRL KNKDSKLFSS LKQYSSKHRV LLTGTPLQNN LDELFMLMHF LDAGKFGSLE EFQEEFKDIN
0501: QEEQISRLHK MLAPHLLRRV KKDVMKELPP KKELILRIEL SSKQKEYYKA ILTRNYQILT RRGGAQISLI NVVMELRKLC CHPYMLEGVE PDIDDAKEAF
0601: KQLLESSGKL QLLDKMMVKL KEQGHRVLIY SQFQHMLDLL EDYCTYKNWQ YERIDGKVGG AERQVRIDRF NAKNSSRFCF LLSTRAGGLG INLATADTVI
0701: IYDSDWNPHA DLQAMARAHR LGQTNKVLIY RLITRGTIEE RMMQMTKKKM VLEHLVVGRL KAQNINQEEL DDIIRYGSKE LFADENDEAG KSRQIHYDAA
0801: AIDRLLDRDQ VGDEEATLDD EDEDGFLKAF KVANFEYVDE AEAAAEEAAQ KRAMETLNSS ERTHYWEELL RDKYQEHKVE EFNALGKGKR NRKLMVSVEE
0901: DDLAGLEDVS SDGEDDNYEA ELTDGDSNST GTTTARRPYK KKARTADSTE PHPLMEGEGK AFRVLGFNQN QRAAFVQILM RFGVGDFDWK EFTSRMKQKT
1001: YEEIKDYGTL FLSHIAEDIT DSATFADGVP KEGLRIQDVL VRIAVLLLIR DKVKYASQHP QTPLFSDDIL LRYPGLKGAK IWKEEHDLVL LRAVLKHGYG
1101: RWQAIVDDKD LKIQEVICQE LNLPFINLPV PGHVSSQAQN GANLTNAEVP NSQSKENGGS DIATDGAQGS GDARNQAQLY QDSSILYHFR DMQRRQVEFI
1201: KKRVLLLEKG LNAEYQKEYF GDPKSNEATN EELKSETKAT NFPSDKLGDS DTKMIDQLPQ VETIASEEIV AACDSDPNQL ELARLYNEMC KAVEEDPMDL
1301: VQSFLAREPA ELNVVKNFPP LETICEDINR ILTPTQEQPI AEMPISNSDK QSEALSHGEN LASKSPPIPQ DACKPKDSAD NESKDKKIES ESIKESCSSL
1401: VEEKNETLTL PDKEDSKTEI DETMNDAELN ENPEKSDAVL DG
0101: DIDKILDCEM RPTTAADNEA TKLGSKQIFV KQYLVKWKGL SYLHCTWVPE KEFLKAFKTH PRLKTKVNNF HQKMASVNTS DEDFVAIRPE WTTVDRILAC
0201: RGDDDEREYL VKWKELPYDE CYWEFESDIS AFQPEIERFN RLRSRSSKFS SSKQKNSVKD DAELKKQQKE FQHYEQSPEF LSGGTLHPYQ LEGLNFLRFS
0301: WSKQTHVILA DEMGLGKTIQ SIAFLASLFK EGVSPHLVVA PLSTLRNWER EFATWAPQMN VLMYVGSAQA RNVIREYEFY FPKKLKKIKK KKSGHLISES
0401: KQDRIKFDVL LTSYEMINFD TTSLKPIKWE CMIVDEGHRL KNKDSKLFSS LKQYSSKHRV LLTGTPLQNN LDELFMLMHF LDAGKFGSLE EFQEEFKDIN
0501: QEEQISRLHK MLAPHLLRRV KKDVMKELPP KKELILRIEL SSKQKEYYKA ILTRNYQILT RRGGAQISLI NVVMELRKLC CHPYMLEGVE PDIDDAKEAF
0601: KQLLESSGKL QLLDKMMVKL KEQGHRVLIY SQFQHMLDLL EDYCTYKNWQ YERIDGKVGG AERQVRIDRF NAKNSSRFCF LLSTRAGGLG INLATADTVI
0701: IYDSDWNPHA DLQAMARAHR LGQTNKVLIY RLITRGTIEE RMMQMTKKKM VLEHLVVGRL KAQNINQEEL DDIIRYGSKE LFADENDEAG KSRQIHYDAA
0801: AIDRLLDRDQ VGDEEATLDD EDEDGFLKAF KVANFEYVDE AEAAAEEAAQ KRAMETLNSS ERTHYWEELL RDKYQEHKVE EFNALGKGKR NRKLMVSVEE
0901: DDLAGLEDVS SDGEDDNYEA ELTDGDSNST GTTTARRPYK KKARTADSTE PHPLMEGEGK AFRVLGFNQN QRAAFVQILM RFGVGDFDWK EFTSRMKQKT
1001: YEEIKDYGTL FLSHIAEDIT DSATFADGVP KEGLRIQDVL VRIAVLLLIR DKVKYASQHP QTPLFSDDIL LRYPGLKGAK IWKEEHDLVL LRAVLKHGYG
1101: RWQAIVDDKD LKIQEVICQE LNLPFINLPV PGHVSSQAQN GANLTNAEVP NSQSKENGGS DIATDGAQGS GDARNQAQLY QDSSILYHFR DMQRRQVEFI
1201: KKRVLLLEKG LNAEYQKEYF GDPKSNEATN EELKSETKAT NFPSDKLGDS DTKMIDQLPQ VETIASEEIV AACDSDPNQL ELARLYNEMC KAVEEDPMDL
1301: VQSFLAREPA ELNVVKNFPP LETICEDINR ILTPTQEQPI AEMPISNSDK QSEALSHGEN LASKSPPIPQ DACKPKDSAD NESKDKKIES ESIKESCSSL
1401: VEEKNETLTL PDKEDSKTEI DETMNDAELN ENPEKSDAVL DG
0001: MILRVFSNFS LVLFHKKMSS LVERLRIRSD RKPVYNLDDS DDDDFVPKKD RTFEQVEAIV RTDAKENACQ ACGESTNLVS CNTCTYAFHA KCLVPPLKDA
0101: SVENWRCPEC VSPLNEIDKI LDCEMRPTKS SEQGSSDAEP KPIFVKQYLV KWKGLSYLHC SWVPEKEFQK AYKSNHRLKT RVNNFHRQME SFNNSEDDFV
0201: AIRPEWTTVD RILACREEDG ELEYLVKYKE LSYDECYWES ESDISTFQNE IQRFKDVNSR TRRSKDVDHK RNPRDFQQFD HTPEFLKGLL HPYQLEGLNF
0301: LRFSWSKQTH VILADEMGLG KTIQSIALLA SLFEENLIPH LVIAPLSTLR NWEREFATWA PQMNVVMYFG TAQARAVIRE HEFYLSKDQK KIKKKKSGQI
0401: SSESKQKRIK FDVLLTSYEM INLDSAVLKP IKWECMIVDE GHRLKNKDSK LFSSLTQYSS NHRILLTGTP LQNNLDELFM LMHFLDAGKF GSLEEFQEEF
0501: KDINQEEQIS RLHKMLAPHL LRRVKKDVMK DMPPKKELIL RVDLSSLQKE YYKAIFTRNY QVLTKKGGAQ ISLNNIMMEL RKVCCHPYML EGVEPVIHDA
0601: NEAFKQLLES CGKLQLLDKM MVKLKEQGHR VLIYTQFQHM LDLLEDYCTH KKWQYERIDG KVGGAERQIR IDRFNAKNSN KFCFLLSTRA GGLGINLATA
0701: DTVIIYDSDW NPHADLQAMA RAHRLGQTNK VMIYRLINRG TIEERMMQLT KKKMVLEHLV VGKLKTQNIN QEELDDIIRY GSKELFASED DEAGKSGKIH
0801: YDDAAIDKLL DRDLVEAEEV SVDDEEENGF LKAFKVANFE YIDENEAAAL EAQRVAAESK SSAGNSDRAS YWEELLKDKF ELHQAEELNA LGKRKRSRKQ
0901: LVSIEEDDLA GLEDVSSDGD ESYEAESTDG EAAGQGVQTG RRPYRRKGRD NLEPTPLMEG EGRSFRVLGF NQSQRAIFVQ TLMRYGAGNF DWKEFVPRLK
1001: QKTFEEINEY GILFLKHIAE EIDENSPTFS DGVPKEGLRI EDVLVRIALL ILVQEKVKFV EDHPGKPVFP SRILERFPGL RSGKIWKEEH DKIMIRAVLK
1101: HGYGRWQAIV DDKELGIQEL ICKELNFPHI SLSAAEQAGL QGQNGSGGSN PGAQTNQNPG SVITGNNNAS ADGAQVNSMF YYRDMQRRLV EFVKKRVLLL
1201: EKAMNYEYAE EYYGLGGSSS IPTEEPEAEP KIADTVGVSF IEVDDEMLDG LPKTDPITSE EIMGAAVDNN QARVEIAQHY NQMCKLLDEN ARESVQAYVN
1301: NQPPSTKVNE SFRALKSING NINTILSITS DQSKSHEDDT KPDLNNVEMK DTAEETKPLR GGVVDLNVVE GEENIAEASG SVDVKMEEAK EEEKPKNMVV
1401: D
0101: SVENWRCPEC VSPLNEIDKI LDCEMRPTKS SEQGSSDAEP KPIFVKQYLV KWKGLSYLHC SWVPEKEFQK AYKSNHRLKT RVNNFHRQME SFNNSEDDFV
0201: AIRPEWTTVD RILACREEDG ELEYLVKYKE LSYDECYWES ESDISTFQNE IQRFKDVNSR TRRSKDVDHK RNPRDFQQFD HTPEFLKGLL HPYQLEGLNF
0301: LRFSWSKQTH VILADEMGLG KTIQSIALLA SLFEENLIPH LVIAPLSTLR NWEREFATWA PQMNVVMYFG TAQARAVIRE HEFYLSKDQK KIKKKKSGQI
0401: SSESKQKRIK FDVLLTSYEM INLDSAVLKP IKWECMIVDE GHRLKNKDSK LFSSLTQYSS NHRILLTGTP LQNNLDELFM LMHFLDAGKF GSLEEFQEEF
0501: KDINQEEQIS RLHKMLAPHL LRRVKKDVMK DMPPKKELIL RVDLSSLQKE YYKAIFTRNY QVLTKKGGAQ ISLNNIMMEL RKVCCHPYML EGVEPVIHDA
0601: NEAFKQLLES CGKLQLLDKM MVKLKEQGHR VLIYTQFQHM LDLLEDYCTH KKWQYERIDG KVGGAERQIR IDRFNAKNSN KFCFLLSTRA GGLGINLATA
0701: DTVIIYDSDW NPHADLQAMA RAHRLGQTNK VMIYRLINRG TIEERMMQLT KKKMVLEHLV VGKLKTQNIN QEELDDIIRY GSKELFASED DEAGKSGKIH
0801: YDDAAIDKLL DRDLVEAEEV SVDDEEENGF LKAFKVANFE YIDENEAAAL EAQRVAAESK SSAGNSDRAS YWEELLKDKF ELHQAEELNA LGKRKRSRKQ
0901: LVSIEEDDLA GLEDVSSDGD ESYEAESTDG EAAGQGVQTG RRPYRRKGRD NLEPTPLMEG EGRSFRVLGF NQSQRAIFVQ TLMRYGAGNF DWKEFVPRLK
1001: QKTFEEINEY GILFLKHIAE EIDENSPTFS DGVPKEGLRI EDVLVRIALL ILVQEKVKFV EDHPGKPVFP SRILERFPGL RSGKIWKEEH DKIMIRAVLK
1101: HGYGRWQAIV DDKELGIQEL ICKELNFPHI SLSAAEQAGL QGQNGSGGSN PGAQTNQNPG SVITGNNNAS ADGAQVNSMF YYRDMQRRLV EFVKKRVLLL
1201: EKAMNYEYAE EYYGLGGSSS IPTEEPEAEP KIADTVGVSF IEVDDEMLDG LPKTDPITSE EIMGAAVDNN QARVEIAQHY NQMCKLLDEN ARESVQAYVN
1301: NQPPSTKVNE SFRALKSING NINTILSITS DQSKSHEDDT KPDLNNVEMK DTAEETKPLR GGVVDLNVVE GEENIAEASG SVDVKMEEAK EEEKPKNMVV
1401: D
Arabidopsis Description
PKLchromatin remodeling factor CHD3 (PICKLE) [Source:TAIR;Acc:AT2G25170]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.