Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG91253 | Soybean | nucleus | 97.67 | 97.58 |
| KRH27613 | Soybean | nucleus | 84.51 | 85.23 |
| VIT_05s0020g02960.t01 | Wine grape | nucleus | 78.26 | 76.07 |
| Solyc01g079690.2.1 | Tomato | nucleus | 70.43 | 75.88 |
| CDY18840 | Canola | nucleus | 72.57 | 71.84 |
| AT3G06010.1 | Thale cress | nucleus | 73.41 | 71.42 |
| Bra040237.1-P | Field mustard | nucleus | 72.76 | 70.91 |
| AT5G19310.1 | Thale cress | nucleus | 68.0 | 68.52 |
| TraesCS1A01G087900.1 | Wheat | nucleus | 56.53 | 67.04 |
| Zm00001d024816_P007 | Maize | cytosol | 64.37 | 62.16 |
| Os05t0144300-01 | Rice | nucleus | 65.3 | 62.06 |
| Zm00001d006798_P002 | Maize | nucleus | 64.18 | 61.65 |
| EES19009 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 64.65 | 61.49 |
| TraesCS1B01G106900.4 | Wheat | nucleus | 63.99 | 60.44 |
| TraesCS1D01G089200.2 | Wheat | nucleus | 63.81 | 60.16 |
| GSMUA_Achr6P20210_001 | Banana | nucleus | 71.64 | 52.39 |
| GSMUA_Achr8P06840_001 | Banana | nucleus | 64.93 | 50.43 |
| KRH76800 | Soybean | cytosol | 22.76 | 32.02 |
| KRH28662 | Soybean | cytosol | 22.57 | 31.72 |
| KRH50913 | Soybean | nucleus | 27.99 | 28.36 |
| KRH02212 | Soybean | nucleus | 27.8 | 28.14 |
| KRH21031 | Soybean | nucleus | 27.8 | 27.93 |
| KRH11241 | Soybean | nucleus | 27.89 | 27.89 |
| KRG89166 | Soybean | nucleus | 19.31 | 27.53 |
| KRH49484 | Soybean | nucleus | 19.22 | 27.32 |
| KRH05279 | Soybean | nucleus | 10.82 | 25.61 |
| KRH75253 | Soybean | cytosol, nucleus, plastid | 19.59 | 23.92 |
| KRH02187 | Soybean | nucleus | 26.21 | 20.32 |
| KRH73568 | Soybean | nucleus | 17.72 | 19.51 |
| KRH52357 | Soybean | nucleus | 24.72 | 18.4 |
| KRH61691 | Soybean | nucleus | 24.44 | 18.17 |
| KRH14560 | Soybean | nucleus | 27.99 | 17.01 |
| KRH33202 | Soybean | nucleus | 22.39 | 16.45 |
| KRH66858 | Soybean | nucleus | 23.41 | 16.38 |
| KRG95191 | Soybean | nucleus | 23.32 | 16.33 |
| KRH48113 | Soybean | nucleus | 33.58 | 16.17 |
| KRH40427 | Soybean | nucleus | 33.4 | 16.11 |
| KRH00799 | Soybean | nucleus | 33.12 | 15.98 |
| KRH06623 | Soybean | nucleus | 32.56 | 15.84 |
| KRH71872 | Soybean | nucleus | 26.87 | 14.11 |
| KRH38118 | Soybean | nucleus | 26.77 | 14.01 |
| KRH42374 | Soybean | nucleus | 25.65 | 12.71 |
| KRH58495 | Soybean | nucleus | 26.31 | 12.08 |
| KRH50934 | Soybean | nucleus | 34.24 | 9.69 |
Protein Annotations
| EntrezGene:100786280 | MapMan:12.4.1.1.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | EMBL:ACUP02006690 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_10G250500 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0042393 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| UniProt:K7LLB3 | EnsemblPlants:KRH35559 | ProteinID:KRH35559 | ProteinID:KRH35559.1 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFAM:PF14619 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF873 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM01314 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| InterPro:SnAC | UniParc:UPI000233CC3B | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:47849566..47859624
Molecular Weight (calculated)
123750.0 Da
IEP (calculated)
8.101
GRAVY (calculated)
-0.713
Length
1072 amino acids
Sequence
(BLAST)
(BLAST)
0001: MENERHAKTL ICALNLLSRD LPLPPHILNS VSSIYRNNHG DGGNSGEDLM TDLEDALSKQ RPNCVPGFKL EQSRDNRYRS LIQHRLNELQ ELPSSRGEDL
0101: QTKCLLELYG LKLAELQMKV RSDVSSEYWL NAKCAYPDRQ LFDWGMMRLR RPLYGVGDPF AMDADDQLKK KREAERLSRL EEKEKNHIET RTRKFFAEIL
0201: NTVREFQLQI QASVKRRKQR NDGVQAWHGR QRQRATRAEK LRFQALKADD QEAYMRMVKE SKNERLTLLL EETNKLLVNL GAAVQRQKDN KYSNGIEALE
0301: DSEADLLESD ALKNGVSKES PLDEDIDMID SDHNGDSSDL LEGQRQYNSA IHSIQEKVTE QPSMLQGGEL RPYQIEGLQW MLSLFNNNLN GILADEMGLG
0401: KTIQTISLIA HLMEHKGVTG PHLIVAPKAV LPNWVNEFTT WAPSITAILY DGRLDERKAM KEELSGEGKF NVLLTHYDLI MRDKAFLKKI QWKYLIVDEG
0501: HRLKNHESAL ARTLDNGYRI QRRLLLTGTP IQNSLQELWS LLNFLLPNIF NSVQNFEDWF NAPFADRVDV SLTDEEQLLI IRRLHQVIRP FILRRKKDEV
0601: EKFLPGKSQV ILKCDMSAWQ KVYYQQVTDV GRVGLDNGSG KSKSLQNLTM QLRKCCNHPY LFVGDYDMYR RKEEIVRASG KFELLDRLLP KLRRAGHRVL
0701: LFSQMTRLMD TLEVYLRLHD FKYLRLDGST KTEERGNLLR KFNAPDSPYF MFLLSTRAGG LGLNLQTADT VIIFDSDWNP QMDQQAEDRA HRIGQKKEVR
0801: VFVLVSVGSI EEVILERAKQ KMGIDAKVIQ AGLFNTTSTA QDRREMLEEI MRRGTSSLGT DVPSEREINR LAARSDEEFW LFEKMDEERR QKENYRSRLM
0901: EEHELPDWVY SPMNKDDKAK DFNSGVTGKR KRKEVVYADT LSDLQWMKAV ENGEDISKFS GKGKRRDHRS SDSVAQASDN TGAEESLELR TESVPMENER
1001: TSEDSFHVTP PAKRFKPEGT NFLKHTYEDV GSGLNRHLLS WNTHKKKRSS FLGQGSLSDT RGHSSNGRAN WN
0101: QTKCLLELYG LKLAELQMKV RSDVSSEYWL NAKCAYPDRQ LFDWGMMRLR RPLYGVGDPF AMDADDQLKK KREAERLSRL EEKEKNHIET RTRKFFAEIL
0201: NTVREFQLQI QASVKRRKQR NDGVQAWHGR QRQRATRAEK LRFQALKADD QEAYMRMVKE SKNERLTLLL EETNKLLVNL GAAVQRQKDN KYSNGIEALE
0301: DSEADLLESD ALKNGVSKES PLDEDIDMID SDHNGDSSDL LEGQRQYNSA IHSIQEKVTE QPSMLQGGEL RPYQIEGLQW MLSLFNNNLN GILADEMGLG
0401: KTIQTISLIA HLMEHKGVTG PHLIVAPKAV LPNWVNEFTT WAPSITAILY DGRLDERKAM KEELSGEGKF NVLLTHYDLI MRDKAFLKKI QWKYLIVDEG
0501: HRLKNHESAL ARTLDNGYRI QRRLLLTGTP IQNSLQELWS LLNFLLPNIF NSVQNFEDWF NAPFADRVDV SLTDEEQLLI IRRLHQVIRP FILRRKKDEV
0601: EKFLPGKSQV ILKCDMSAWQ KVYYQQVTDV GRVGLDNGSG KSKSLQNLTM QLRKCCNHPY LFVGDYDMYR RKEEIVRASG KFELLDRLLP KLRRAGHRVL
0701: LFSQMTRLMD TLEVYLRLHD FKYLRLDGST KTEERGNLLR KFNAPDSPYF MFLLSTRAGG LGLNLQTADT VIIFDSDWNP QMDQQAEDRA HRIGQKKEVR
0801: VFVLVSVGSI EEVILERAKQ KMGIDAKVIQ AGLFNTTSTA QDRREMLEEI MRRGTSSLGT DVPSEREINR LAARSDEEFW LFEKMDEERR QKENYRSRLM
0901: EEHELPDWVY SPMNKDDKAK DFNSGVTGKR KRKEVVYADT LSDLQWMKAV ENGEDISKFS GKGKRRDHRS SDSVAQASDN TGAEESLELR TESVPMENER
1001: TSEDSFHVTP PAKRFKPEGT NFLKHTYEDV GSGLNRHLLS WNTHKKKRSS FLGQGSLSDT RGHSSNGRAN WN
0001: MVAQQLQERC GGTSQEDPVE TTKSLICALN YISRDLPLPP HLFTAVSSIY HGASSSSLSD SDVSPPLPTS PPANKAPYGA DLMGEFEDAL LKQRPDCESG
0101: SRLIQLLDNR NKSHIQRRLS ELEELPSTRG EDLQAKCLLE LYGLKLRELQ GKVRTAVSSE FWLRLNCADV SSQVFDWGMM RLPRPFYGVG DPFAMEADDQ
0201: FRKKRDAERL SRLEEEEKNL IETAKRKFFA EVLNAVREFQ LQIQATQKRR RQRNDGVQAW HGRQRQRATR AEKLRLMALK SDDQEAYMKL VKESKNERLT
0301: TLLEETNKLL ANLGAAVQRQ KDAKLPEGID LLKDSESDLS ELDAPRSEPL QDLLPDQDID ITESDNNDDS NDLLEGQRQY NSAIHSIQEK VTEQPSLLEG
0401: GELRSYQLEG LQWMVSLFNN NLNGILADEM GLGKTIQTIS LIAYLLENKG VPGPYLIVAP KAVLPNWVNE FATWVPSIAA FLYDGRLEER KAIREKIAGE
0501: GKFNVLITHY DLIMRDKAFL KKIEWYYMIV DEGHRLKNHE SALAKTLLTG YRIKRRLLLT GTPIQNSLQE LWSLLNFLLP HIFNSVQNFE EWFNAPFADR
0601: GNVSLTDEEE LLIIHRLHHV IRPFILRRKK DEVEKFLPGK TQVILKCDMS AWQKVYYKQV TDMGRVGLQT GSGKSKSLQN LTMQLRKCCN HPYLFVGGDY
0701: NMWKKPEIVR ASGKFELLDR LLPKLRKAGH RILLFSQMTR LIDVLEIYLT LNDYKYLRLD GTTKTDQRGL LLKQFNEPDS PYFMFLLSTR AGGLGLNLQT
0801: ADTVIIFDSD WNPQMDQQAE DRAHRIGQKK EVRVFVLVSV GSVEEVILER AKQKMGIDAK VIQAGLFNTT STAQDRREML EEIMRKGTSS LGTDVPSERE
0901: INRLAARSED EFWMFERMDE ERRRKENYRA RLMQEQEVPE WAYTTQTQEE KLNNGKFHFG SVTGKRKRKE IVYSDTLSEL QWLKAVESGE DLSKLSMRYN
1001: RREENASNTK TSTSKKVIES IQTVSDGTSE EDEEEQEEER AKEMSGKQRV DKSEEEEEEG EEENDGKAIF KWNTHKKKRS RYSFTCSSSD SRAQSSNGSR
1101: RK
0101: SRLIQLLDNR NKSHIQRRLS ELEELPSTRG EDLQAKCLLE LYGLKLRELQ GKVRTAVSSE FWLRLNCADV SSQVFDWGMM RLPRPFYGVG DPFAMEADDQ
0201: FRKKRDAERL SRLEEEEKNL IETAKRKFFA EVLNAVREFQ LQIQATQKRR RQRNDGVQAW HGRQRQRATR AEKLRLMALK SDDQEAYMKL VKESKNERLT
0301: TLLEETNKLL ANLGAAVQRQ KDAKLPEGID LLKDSESDLS ELDAPRSEPL QDLLPDQDID ITESDNNDDS NDLLEGQRQY NSAIHSIQEK VTEQPSLLEG
0401: GELRSYQLEG LQWMVSLFNN NLNGILADEM GLGKTIQTIS LIAYLLENKG VPGPYLIVAP KAVLPNWVNE FATWVPSIAA FLYDGRLEER KAIREKIAGE
0501: GKFNVLITHY DLIMRDKAFL KKIEWYYMIV DEGHRLKNHE SALAKTLLTG YRIKRRLLLT GTPIQNSLQE LWSLLNFLLP HIFNSVQNFE EWFNAPFADR
0601: GNVSLTDEEE LLIIHRLHHV IRPFILRRKK DEVEKFLPGK TQVILKCDMS AWQKVYYKQV TDMGRVGLQT GSGKSKSLQN LTMQLRKCCN HPYLFVGGDY
0701: NMWKKPEIVR ASGKFELLDR LLPKLRKAGH RILLFSQMTR LIDVLEIYLT LNDYKYLRLD GTTKTDQRGL LLKQFNEPDS PYFMFLLSTR AGGLGLNLQT
0801: ADTVIIFDSD WNPQMDQQAE DRAHRIGQKK EVRVFVLVSV GSVEEVILER AKQKMGIDAK VIQAGLFNTT STAQDRREML EEIMRKGTSS LGTDVPSERE
0901: INRLAARSED EFWMFERMDE ERRRKENYRA RLMQEQEVPE WAYTTQTQEE KLNNGKFHFG SVTGKRKRKE IVYSDTLSEL QWLKAVESGE DLSKLSMRYN
1001: RREENASNTK TSTSKKVIES IQTVSDGTSE EDEEEQEEER AKEMSGKQRV DKSEEEEEEG EEENDGKAIF KWNTHKKKRS RYSFTCSSSD SRAQSSNGSR
1101: RK
Arabidopsis Description
CHR12Probable ATP-dependent DNA helicase CHR12 [Source:UniProtKB/Swiss-Prot;Acc:F4J9M5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.