Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95191 | Soybean | nucleus | 96.34 | 96.41 |
| KRH33202 | Soybean | nucleus | 78.2 | 82.11 |
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 74.67 | 73.47 |
| Solyc04g016370.2.1 | Tomato | nucleus | 69.39 | 69.07 |
| CDX72050 | Canola | cytosol | 64.23 | 66.8 |
| AT3G57300.2 | Thale cress | cytosol | 66.84 | 66.49 |
| Bra007318.1-P | Field mustard | nucleus | 64.82 | 66.38 |
| Bra014632.1-P | Field mustard | cytosol | 65.54 | 66.31 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 60.97 | 63.89 |
| CDY30994 | Canola | nucleus | 26.24 | 62.81 |
| OQU92590 | Sorghum | nucleus | 55.55 | 60.57 |
| CDX88940 | Canola | nucleus | 65.01 | 60.22 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 57.18 | 58.63 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 57.25 | 58.62 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 57.05 | 58.42 |
| Zm00001d029180_P002 | Maize | nucleus | 57.44 | 57.7 |
| HORVU4Hr1G046140.4 | Barley | nucleus | 56.85 | 57.27 |
| Zm00001d047471_P002 | Maize | nucleus | 56.4 | 55.14 |
| CDY06115 | Canola | nucleus | 64.56 | 52.52 |
| KRH76800 | Soybean | cytosol | 15.4 | 30.97 |
| KRH28662 | Soybean | cytosol | 15.21 | 30.54 |
| KRH49484 | Soybean | nucleus | 14.16 | 28.78 |
| KRG89166 | Soybean | nucleus | 13.97 | 28.46 |
| KRH75253 | Soybean | cytosol, nucleus, plastid | 14.43 | 25.17 |
| KRH05279 | Soybean | nucleus | 7.44 | 25.17 |
| KRG91253 | Soybean | nucleus | 16.45 | 23.49 |
| KRH35559 | Soybean | nucleus | 16.38 | 23.41 |
| KRH50913 | Soybean | nucleus | 16.06 | 23.25 |
| KRH27613 | Soybean | nucleus | 16.12 | 23.24 |
| KRH21031 | Soybean | nucleus | 16.12 | 23.15 |
| KRH11241 | Soybean | nucleus | 16.19 | 23.13 |
| KRH02212 | Soybean | nucleus | 15.67 | 22.66 |
| KRH52357 | Soybean | nucleus | 16.84 | 17.92 |
| KRH73568 | Soybean | nucleus | 11.36 | 17.86 |
| KRH61691 | Soybean | nucleus | 16.64 | 17.68 |
| KRH71872 | Soybean | nucleus | 21.48 | 16.12 |
| KRH38118 | Soybean | nucleus | 21.54 | 16.11 |
| KRH02187 | Soybean | nucleus | 13.77 | 15.26 |
| KRH14560 | Soybean | nucleus | 16.91 | 14.68 |
| KRH40427 | Soybean | nucleus | 18.28 | 12.6 |
| KRH00799 | Soybean | nucleus | 18.28 | 12.6 |
| KRH48113 | Soybean | nucleus | 18.08 | 12.44 |
| KRH06623 | Soybean | nucleus | 17.82 | 12.39 |
| KRH42374 | Soybean | nucleus | 17.17 | 12.15 |
| KRH58495 | Soybean | nucleus | 16.97 | 11.13 |
| KRH50934 | Soybean | nucleus | 17.62 | 7.13 |
Protein Annotations
| EntrezGene:100810344 | MapMan:12.4.3.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | EMBL:ACUP02002014 | ncoils:Coil |
| InterPro:DBINO | EnsemblPlantsGene:GLYMA_03G133700 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006338 | GO:GO:0006351 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0031011 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | UniProt:I1JNA2 |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR020838 | InterPro:IPR038718 | InterPro:Ino80 | EnsemblPlants:KRH66858 |
| ProteinID:KRH66858 | ProteinID:KRH66858.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF13892 |
| PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51413 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF868 | SMART:SM00487 |
| SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI000294C9E2 | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:+:34888079..34900939
Molecular Weight (calculated)
175088.0 Da
IEP (calculated)
7.603
GRAVY (calculated)
-0.613
Length
1532 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDHRPKSKES LSYSTLFNLE SLMNFQLPEQ DNDFDYYGNS SQDESRDSQG VGIANHSNGN VHEKEVNLFK KRRWSLNSDN EEKSSFYGTH MTEERYRSML
0101: GEHIQKYKRR FKGTLNSPAQ NQAAVPLVKS NTGLKAHKSG NERRGGGLHV AESTSEWMND SGSQKPGNYR NADFSPQYGT DRIMYEPASL DIGDGIIYKI
0201: PPVYDKLAGA LNLPSCSDIH VEDLYLKGTL DLGSLAEMMA ADKRFGNRNR AGMGEAIPQF ESLQARLKVM SASNSARKFS LKMSDVDLNS SIPEGAAGSI
0301: RRSILSEGGV LQVYYVKVLE KGDTYEIIER SLPKKQKVKK DPALIEKEEM ERCGKVWANI VRRDIPKHHR NFTIFHRKQL IDAKRVSETC QREVRMKVSR
0401: SLKWTRTASM RTRKLARDML LFWKRIDKEM TEVRKREEKE AAEALRREQE LREAKRQQQR LNFLIQQTEL YSHFMQNKSN LLSSETLPKE DEDADDQDAL
0501: IDSSDAVPDE EEDPEEAELK KEALKAAQEA VSKQKMLTSA FDTECLRLRQ AGETDSLPPD VAGASNIDLQ TPSTMPVAST VRTPELFKGV LKEYQLKGLQ
0601: WLVNCYEQGL NGILADEMGL GKTIQAMAFL AHLAEEKNIW GPFLVVAPAS VLNNWNEELE RFCPELKRLP YWGGLSERTV LRKSINPKDL YRREAKFHIL
0701: ITSYQLLVSD EKYFRRVKWQ YMVLDEAQAI KSATSIRWKT LLSFNCRNRL LLTGTPIQNN MAELWALLHF IMPTLFDSHE QFNEWFSKGI ENHAEHGGTL
0801: NEHQLNRLHS ILKPFMLRRV KKDVISELTT KTEVTVHCKL SSRQQAFYQA IKNKISLAEL FDSNRGQLNE KRILNLMNIV IQLRKVCNHP ELFERSEGST
0901: YLYFGEIPNS LPPPPFGEME DVYYSGGHNP ISYEIPKLVY QEIIQSSETL SSAVGRGVSR ESFHKHFNIF RPENVYRSVF SEDMCSKSGN FGFTHMMNLS
1001: PHEVTFLATG SFMERLLFSM MRWEQKFIDE AVDFLMETID DDPECSYLEK EKVRAVTRML LVPSRSETQF LQKKWQTGPS HAPFEALVVP HQDRVLSNAR
1101: LLHSAYTYIP QSRAPPIGAH CSDRNFYYKM IEELHDPWVK RLLVGFARTS DNNVPRKPDS PHHLIQEIDS ELPVSQPALQ LTYSIFGSSP PMRNFDPAKL
1201: LTDSGKLQTL DILLKRLRAE NHRVLLFAQM TKMLNILEDY MNYRKYRYFR LDGSSTIQDR RDMVKDFQHR SDIFVFLLST RAGGLGINLT AADTVIFYES
1301: DWNPTLDLQA MDRAHRLGQT KDVTVYRLIC KETVEEKILL RASQKSTVQN LVMTGGSVGG DLLAPEDVVS LLLDDVQLEQ KLKEIPLQVK DKQKKKQPMR
1401: GIRVNEDGDA SMEDLTSSVA QGTSDNDLSM DPEGSKSSNK KRKAFSDKPT SRPMNSQKMS EFSTTPMDDE LDVVDPVGQK PKRPKRIKKN VNEKFEDAFT
1501: GIAALIPEQT QFPPPPSDFS AGGSKAESGQ DN
0101: GEHIQKYKRR FKGTLNSPAQ NQAAVPLVKS NTGLKAHKSG NERRGGGLHV AESTSEWMND SGSQKPGNYR NADFSPQYGT DRIMYEPASL DIGDGIIYKI
0201: PPVYDKLAGA LNLPSCSDIH VEDLYLKGTL DLGSLAEMMA ADKRFGNRNR AGMGEAIPQF ESLQARLKVM SASNSARKFS LKMSDVDLNS SIPEGAAGSI
0301: RRSILSEGGV LQVYYVKVLE KGDTYEIIER SLPKKQKVKK DPALIEKEEM ERCGKVWANI VRRDIPKHHR NFTIFHRKQL IDAKRVSETC QREVRMKVSR
0401: SLKWTRTASM RTRKLARDML LFWKRIDKEM TEVRKREEKE AAEALRREQE LREAKRQQQR LNFLIQQTEL YSHFMQNKSN LLSSETLPKE DEDADDQDAL
0501: IDSSDAVPDE EEDPEEAELK KEALKAAQEA VSKQKMLTSA FDTECLRLRQ AGETDSLPPD VAGASNIDLQ TPSTMPVAST VRTPELFKGV LKEYQLKGLQ
0601: WLVNCYEQGL NGILADEMGL GKTIQAMAFL AHLAEEKNIW GPFLVVAPAS VLNNWNEELE RFCPELKRLP YWGGLSERTV LRKSINPKDL YRREAKFHIL
0701: ITSYQLLVSD EKYFRRVKWQ YMVLDEAQAI KSATSIRWKT LLSFNCRNRL LLTGTPIQNN MAELWALLHF IMPTLFDSHE QFNEWFSKGI ENHAEHGGTL
0801: NEHQLNRLHS ILKPFMLRRV KKDVISELTT KTEVTVHCKL SSRQQAFYQA IKNKISLAEL FDSNRGQLNE KRILNLMNIV IQLRKVCNHP ELFERSEGST
0901: YLYFGEIPNS LPPPPFGEME DVYYSGGHNP ISYEIPKLVY QEIIQSSETL SSAVGRGVSR ESFHKHFNIF RPENVYRSVF SEDMCSKSGN FGFTHMMNLS
1001: PHEVTFLATG SFMERLLFSM MRWEQKFIDE AVDFLMETID DDPECSYLEK EKVRAVTRML LVPSRSETQF LQKKWQTGPS HAPFEALVVP HQDRVLSNAR
1101: LLHSAYTYIP QSRAPPIGAH CSDRNFYYKM IEELHDPWVK RLLVGFARTS DNNVPRKPDS PHHLIQEIDS ELPVSQPALQ LTYSIFGSSP PMRNFDPAKL
1201: LTDSGKLQTL DILLKRLRAE NHRVLLFAQM TKMLNILEDY MNYRKYRYFR LDGSSTIQDR RDMVKDFQHR SDIFVFLLST RAGGLGINLT AADTVIFYES
1301: DWNPTLDLQA MDRAHRLGQT KDVTVYRLIC KETVEEKILL RASQKSTVQN LVMTGGSVGG DLLAPEDVVS LLLDDVQLEQ KLKEIPLQVK DKQKKKQPMR
1401: GIRVNEDGDA SMEDLTSSVA QGTSDNDLSM DPEGSKSSNK KRKAFSDKPT SRPMNSQKMS EFSTTPMDDE LDVVDPVGQK PKRPKRIKKN VNEKFEDAFT
1501: GIAALIPEQT QFPPPPSDFS AGGSKAESGQ DN
0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
Arabidopsis Description
INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.