Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G147000.1 | Wheat | nucleus | 95.07 | 96.66 |
| TraesCS4D01G159900.1 | Wheat | nucleus | 94.87 | 96.59 |
| TraesCS4B01G162000.1 | Wheat | nucleus | 94.87 | 96.46 |
| OQU92590 | Sorghum | nucleus | 75.74 | 81.99 |
| Zm00001d029180_P002 | Maize | nucleus | 78.9 | 78.69 |
| Zm00001d047471_P002 | Maize | nucleus | 78.3 | 76.01 |
| GSMUA_Achr8P00120_001 | Banana | nucleus | 59.3 | 61.7 |
| KRH33202 | Soybean | nucleus | 57.0 | 59.42 |
| VIT_08s0007g09020.t01 | Wine grape | nucleus | 59.5 | 58.12 |
| Solyc04g016370.2.1 | Tomato | nucleus | 57.59 | 56.92 |
| KRH66858 | Soybean | nucleus | 57.27 | 56.85 |
| KRG95191 | Soybean | nucleus | 57.2 | 56.83 |
| CDX72050 | Canola | cytosol | 54.83 | 56.62 |
| CDY30994 | Canola | nucleus | 23.67 | 56.25 |
| Bra007318.1-P | Field mustard | nucleus | 55.03 | 55.95 |
| Bra014632.1-P | Field mustard | cytosol | 55.23 | 55.48 |
| AT3G57300.2 | Thale cress | cytosol | 55.62 | 54.94 |
| CDX88940 | Canola | nucleus | 55.36 | 50.91 |
| CDY06115 | Canola | nucleus | 55.36 | 44.72 |
| HORVU2Hr1G022450.1 | Barley | nucleus | 10.72 | 28.4 |
| HORVU4Hr1G088540.8 | Barley | cytosol | 13.61 | 23.47 |
| HORVU3Hr1G012850.1 | Barley | nucleus | 16.04 | 21.54 |
| HORVU1Hr1G021540.17 | Barley | plasma membrane | 16.17 | 20.83 |
| HORVU6Hr1G006050.1 | Barley | plastid | 17.42 | 11.97 |
| HORVU7Hr1G041450.33 | Barley | nucleus | 17.16 | 10.43 |
Protein Annotations
| MapMan:12.4.3.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | InterPro:DBINO | GO:GO:0000003 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006338 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0010228 | GO:GO:0016043 | GO:GO:0016444 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0031011 | GO:GO:0042393 | GO:GO:0045739 | EnsemblPlantsGene:HORVU4Hr1G046140 | EnsemblPlants:HORVU4Hr1G046140.4 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR020838 | InterPro:IPR038718 | InterPro:Ino80 |
| UniProt:M0WJW2 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF13892 | PFscan:PS51192 |
| PFscan:PS51194 | PFscan:PS51413 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF868 | SMART:SM00487 | SMART:SM00490 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0002964C47 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr4H:-:366824934..366837779
Molecular Weight (calculated)
173640.0 Da
IEP (calculated)
7.781
GRAVY (calculated)
-0.549
Length
1521 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDPRRPSPRG VANGSGFSYS NLFNLEPLLN FKVPLPEDLD RYGNSSPNGS VSSQGQESLS DQYNGVSDAS HGLHRKRKRH LGVASDDEEA DAHSNQITEE
0101: YYRTMLSEHV QKYRRSKVNE GVFGSDPPRA DTPQMIKHKN SNTRVMKCRS DFKDVAALGV VETSPEYNGM GSISAYGGFN KIVASLDSSS LDMGDNVSYL
0201: IPEGYDKLAS SLNLPVFSDI RVEEHFLNDM LDLRTLSAML GTDRKFEATN RGGLAEPQPQ HESLQERVKM QKFALQVTED PFAIPEGSAG RIRRSIISES
0301: GSLQVHYVKV LEKGDTYEII ERSLPKKQIV TKEHSETMKE DLASFLKRWH IIARNIPKHQ RNFTTLLKKR QMDAKRFSEN CQREVKLKVS RSLKLMRSAP
0401: VRTRKLARDM LIFWKRVDKE QYELRKKEER DAAEALKREE ELREAKRQQQ RLNFLLSQTE LYSHFMQNKA GESALPDEGS ALEVDNEEDP EEAELKREAF
0501: RAAQHAVSQQ KRMTNAFDSE IVRLCQSSES GIPTDDSATM EPSKIDLLHP STMPEQSSVQ TPELFKGVLK EYQLKGLQWL VNCYEQVNSY RAIVFWSLVV
0601: TTIVRILDFL QGLNGILADE MGLGKTVQAM AFLSHLAEDK NIWGPFLVVA PASVVNNWAE EVIRFCPDLK ILPYWGPERV VLRKNINPKR LYRRDASFHI
0701: LITNYQILVN EEKLLRRVKW QYMVLDEAQA IKSSSSQRWK TLLSFNCRNR LLLTGTPIQN NMAELWALLH FIMPTLFDSH EQFNEWFSKG IEGHAEHGGT
0801: LNEHQLSRLH AILKPFMLRR VKIDVIAEMT EKKEEIVPCR LSSRQQIFYQ AIKNKISLNE LLDGSRGNLN DKKLLSLMNI VMQLRKVCNH PELFERNEGS
0901: YYFYFAEIPN SLLPPPFGEL QDIHYAGKRN PIVFEIPKLV YEGIICNTEI PVDGCGFRNG YINKLFNIFL PSNIHNSAVP ESTSRTTSVL PSGAFGFTRL
1001: ANLSPVEASF LATCSLFERL VFSVTRCKRE YVDEIMDLFL DSEGSDLQLS QYDAAKVRAV TRLLLSPKRT DSSLLRTKLE IGLSDNPCEA PVLSHHDRLV
1101: SNIRLLRSTY GFIPPARAPP INVCCSDRNF AYKLTDEMHD PWIKKLFLGF ARTSEFNGPR IPNGHNTLIQ EVRTDLPIPQ PMLQLPYRIF GSSPPMSNFD
1201: PAKMLTDSGK LHTLDKLLRQ LRAENHRVLL FAQMTKMLDI LEDYMNFRKF KYFRLDGSSA ISDRRDMVRN FQNRNDIFVF LLSTRAGGLG INLTAADTVI
1301: FYEIDWNPTQ DQQAMDRTHR LGQTKEVTVY RLICKDTIEE KILQRAKQKN AVQELVMKGK QVQDDHLMRQ EDVVSLLLDD TQIAHKLKEI SMQAKDRLKK
1401: RRAKAIKVDK EGDLKLEDLD DPTEEPVEQD HTTSKKKKSS HKKPPKSQDN DGADGDVPES GPAKDEEHIA SLMPKRSKRL VRSMGEDKEP VAASDVEKPA
1501: DAAENNDSNH AEELQDQTPP A
0101: YYRTMLSEHV QKYRRSKVNE GVFGSDPPRA DTPQMIKHKN SNTRVMKCRS DFKDVAALGV VETSPEYNGM GSISAYGGFN KIVASLDSSS LDMGDNVSYL
0201: IPEGYDKLAS SLNLPVFSDI RVEEHFLNDM LDLRTLSAML GTDRKFEATN RGGLAEPQPQ HESLQERVKM QKFALQVTED PFAIPEGSAG RIRRSIISES
0301: GSLQVHYVKV LEKGDTYEII ERSLPKKQIV TKEHSETMKE DLASFLKRWH IIARNIPKHQ RNFTTLLKKR QMDAKRFSEN CQREVKLKVS RSLKLMRSAP
0401: VRTRKLARDM LIFWKRVDKE QYELRKKEER DAAEALKREE ELREAKRQQQ RLNFLLSQTE LYSHFMQNKA GESALPDEGS ALEVDNEEDP EEAELKREAF
0501: RAAQHAVSQQ KRMTNAFDSE IVRLCQSSES GIPTDDSATM EPSKIDLLHP STMPEQSSVQ TPELFKGVLK EYQLKGLQWL VNCYEQVNSY RAIVFWSLVV
0601: TTIVRILDFL QGLNGILADE MGLGKTVQAM AFLSHLAEDK NIWGPFLVVA PASVVNNWAE EVIRFCPDLK ILPYWGPERV VLRKNINPKR LYRRDASFHI
0701: LITNYQILVN EEKLLRRVKW QYMVLDEAQA IKSSSSQRWK TLLSFNCRNR LLLTGTPIQN NMAELWALLH FIMPTLFDSH EQFNEWFSKG IEGHAEHGGT
0801: LNEHQLSRLH AILKPFMLRR VKIDVIAEMT EKKEEIVPCR LSSRQQIFYQ AIKNKISLNE LLDGSRGNLN DKKLLSLMNI VMQLRKVCNH PELFERNEGS
0901: YYFYFAEIPN SLLPPPFGEL QDIHYAGKRN PIVFEIPKLV YEGIICNTEI PVDGCGFRNG YINKLFNIFL PSNIHNSAVP ESTSRTTSVL PSGAFGFTRL
1001: ANLSPVEASF LATCSLFERL VFSVTRCKRE YVDEIMDLFL DSEGSDLQLS QYDAAKVRAV TRLLLSPKRT DSSLLRTKLE IGLSDNPCEA PVLSHHDRLV
1101: SNIRLLRSTY GFIPPARAPP INVCCSDRNF AYKLTDEMHD PWIKKLFLGF ARTSEFNGPR IPNGHNTLIQ EVRTDLPIPQ PMLQLPYRIF GSSPPMSNFD
1201: PAKMLTDSGK LHTLDKLLRQ LRAENHRVLL FAQMTKMLDI LEDYMNFRKF KYFRLDGSSA ISDRRDMVRN FQNRNDIFVF LLSTRAGGLG INLTAADTVI
1301: FYEIDWNPTQ DQQAMDRTHR LGQTKEVTVY RLICKDTIEE KILQRAKQKN AVQELVMKGK QVQDDHLMRQ EDVVSLLLDD TQIAHKLKEI SMQAKDRLKK
1401: RRAKAIKVDK EGDLKLEDLD DPTEEPVEQD HTTSKKKKSS HKKPPKSQDN DGADGDVPES GPAKDEEHIA SLMPKRSKRL VRSMGEDKEP VAASDVEKPA
1501: DAAENNDSNH AEELQDQTPP A
0001: MDPSRRPPKD SPYANLFDLE PLMKFRIPKP EDEVDYYGSS SQDESRSTQG GVVANYSNGS KSRMNASSKK RKRWTEAEDA EDDDDLYNQH VTEEHYRSML
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
0101: GEHVQKFKNR SKETQGNPPH LMGFPVLKSN VGSYRGRKPG NDYHGRFYDM DNSPNFAADV TPHRRGSYHD RDITPKIAYE PSYLDIGDGV IYKIPPSYDK
0201: LVASLNLPSF SDIHVEEFYL KGTLDLRSLA ELMASDKRSG VRSRNGMGEP RPQYESLQAR MKALSPSNST PNFSLKVSEA AMNSAIPEGS AGSTARTILS
0301: EGGVLQVHYV KILEKGDTYE IVKRSLPKKL KAKNDPAVIE KTERDKIRKA WINIVRRDIA KHHRIFTTFH RKLSIDAKRF ADGCQREVRM KVGRSYKIPR
0401: TAPIRTRKIS RDMLLFWKRY DKQMAEERKK QEKEAAEAFK REQEQRESKR QQQRLNFLIK QTELYSHFMQ NKTDSNPSEA LPIGDENPID EVLPETSAAE
0501: PSEVEDPEEA ELKEKVLRAA QDAVSKQKQI TDAFDTEYMK LRQTSEMEGP LNDISVSGSS NIDLHNPSTM PVTSTVQTPE LFKGTLKEYQ MKGLQWLVNC
0601: YEQGLNGILA DEMGLGKTIQ AMAFLAHLAE EKNIWGPFLV VAPASVLNNW ADEISRFCPD LKTLPYWGGL QERTILRKNI NPKRMYRRDA GFHILITSYQ
0701: LLVTDEKYFR RVKWQYMVLD EAQAIKSSSS IRWKTLLSFN CRNRLLLTGT PIQNNMAELW ALLHFIMPML FDNHDQFNEW FSKGIENHAE HGGTLNEHQL
0801: NRLHAILKPF MLRRVKKDVV SELTTKTEVT VHCKLSSRQQ AFYQAIKNKI SLAELFDSNR GQFTDKKVLN LMNIVIQLRK VCNHPELFER NEGSSYLYFG
0901: VTSNSLLPHP FGELEDVHYS GGQNPIIYKI PKLLHQEVLQ NSETFCSSVG RGISRESFLK HFNIYSPEYI LKSIFPSDSG VDQVVSGSGA FGFSRLMDLS
1001: PSEVGYLALC SVAERLLFSI LRWERQFLDE LVNSLMESKD GDLSDNNIER VKTKAVTRML LMPSKVETNF QKRRLSTGPT RPSFEALVIS HQDRFLSSIK
1101: LLHSAYTYIP KARAPPVSIH CSDRNSAYRV TEELHQPWLK RLLIGFARTS EANGPRKPNS FPHPLIQEID SELPVVQPAL QLTHRIFGSC PPMQSFDPAK
1201: LLTDSGKLQT LDILLKRLRA GNHRVLLFAQ MTKMLNILED YMNYRKYKYL RLDGSSTIMD RRDMVRDFQH RSDIFVFLLS TRAGGLGINL TAADTVIFYE
1301: SDWNPTLDLQ AMDRAHRLGQ TKDVTVYRLI CKETVEEKIL HRASQKNTVQ QLVMTGGHVQ GDDFLGAADV VSLLMDDAEA AQLEQKFREL PLQVKDRQKK
1401: KTKRIRIDAE GDATLEELED VDRQDNGQEP LEEPEKPKSS NKKRRAASNP KARAPQKAKE EANGEDTPQR TKRVKRQTKS INESLEPVFS ASVTESNKGF
1501: DPSSSAN
Arabidopsis Description
INO80DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.