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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G039800.1 Wheat nucleus, plastid 95.21 95.26
TraesCS6B01G048200.2 Wheat nucleus, plastid 95.08 95.25
TraesCS6A01G034200.2 Wheat nucleus, plastid 95.17 95.12
OQU84199 Sorghum nucleus 76.56 79.92
Zm00001d014977_P002 Maize nucleus 76.38 78.18
VIT_15s0046g02290.t01 Wine grape plastid 59.49 58.2
GSMUA_Achr1P24350_001 Banana nucleus 55.96 58.11
GSMUA_AchrUn_... Banana nucleus, plastid 58.36 57.96
GSMUA_AchrUn_... Banana nucleus 53.93 55.64
Solyc01g094800.2.1 Tomato nucleus 56.05 55.5
KRH48113 Soybean nucleus 55.56 55.26
Bra000409.1-P Field mustard plastid 53.79 55.09
CDY27338 Canola nucleus, plastid 52.26 54.99
CDX83383 Canola nucleus, plastid 53.03 54.99
CDY37083 Canola plastid 52.35 54.95
KRH00799 Soybean nucleus 55.01 54.82
KRH40427 Soybean nucleus 54.97 54.77
AT2G46020.3 Thale cress plastid 54.25 54.77
KRH06623 Soybean nucleus 54.47 54.74
Bra039296.1-P Field mustard plastid 52.76 54.66
CDX95673 Canola cytosol 24.25 54.57
CDY71637 Canola nucleus 16.89 50.54
CDX95672 Canola plastid 24.48 50.19
HORVU2Hr1G022450.1 Barley nucleus 7.63 29.44
HORVU1Hr1G021540.17 Barley plasma membrane 12.92 24.22
HORVU4Hr1G088540.8 Barley cytosol 9.58 24.04
HORVU3Hr1G012850.1 Barley nucleus 12.1 23.65
HORVU4Hr1G046140.4 Barley nucleus 11.97 17.42
HORVU7Hr1G041450.33 Barley nucleus 17.57 15.55
Protein Annotations
Gene3D:1.20.920.10MapMan:12.4.1.1.3Gene3D:3.40.50.10810Gene3D:3.40.50.300UniProt:A0A287T863InterPro:BRM
InterPro:BromodomainInterPro:Bromodomain-like_sfncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003682GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829
GO:GO:0006139GO:GO:0006355GO:GO:0006412GO:GO:0006950GO:GO:0008094GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009628GO:GO:0009653GO:GO:0009987GO:GO:0010199
GO:GO:0016043GO:GO:0016787GO:GO:0019538GO:GO:0040029GO:GO:0043044GO:GO:1900036
GO:GO:1903798InterPro:Gln-Leu-Gln_QLQEnsemblPlantsGene:HORVU6Hr1G006050EnsemblPlants:HORVU6Hr1G006050.1InterPro:Helicase_ATP-bdInterPro:Helicase_C
InterPro:IPR001487InterPro:IPR001650InterPro:IPR014001InterPro:IPR014978InterPro:IPR036427InterPro:IPR038718
InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271PFscan:PS51192PFscan:PS51194PFscan:PS51666
PANTHER:PTHR10799PANTHER:PTHR10799:SF577SMART:SM00297SMART:SM00487SMART:SM00490SMART:SM00951
InterPro:SNF2-like_sfInterPro:SNF2_NSUPFAM:SSF47370SUPFAM:SSF52540UniParc:UPI000B47E7F5SEG:seg
Description
No Description!
Coordinates
chrchr6H:-:13265913..13277591
Molecular Weight (calculated)
247300.0 Da
IEP (calculated)
9.192
GRAVY (calculated)
-0.887
Length
2214 amino acids
Sequence
(BLAST)
0001: MLPGGAPSGS SPASSPRPEQ TPTPSQQQQA QHLGFARNQQ AMMHQQQQQQ SYQPGMPHGM MGGGGGFPQS SGPMGPFQGQ RSLPQPGGPQ GQQYNQSTLQ
0101: QQQAYMQFLM QQQKSHGMQL QQQQQQQQAK MNMPGPSTRD QDAAANPAKI QELMSLQAHA QAQAQAQAQM LKRQSEHLQQ AEKQQPEQGQ RAGSEQRSGD
0201: MRPPMPQQGI PGQQMSSASM VRPMQPMQGQ AGMGNIGGIP LQAIHAWAKE QNIDLSDPAN ASLISQIVPI WQARMAAMQK QNATNIAAQQ QQQQQQQQQQ
0301: QQQQQQQXXX XXQQQQQQSQ QMVPRQVNSD APLNGNNPGQ APLKPRQPPP PSSSVSAGAE TKMTNPGNLQ MQQQFSAHNR ENSNERAVRP SMTMGNAGQM
0401: MHMAQSSGQA NKISEQPNPK NTLASSEAMQ LQYARQLQQA NRATAPTATP GETGGSQAPT QGGRPNSNFT KHQLHVLKAQ ILAFRRLKRG DRTLPPEVLE
0501: LIMSPPPPPP PDSQMQLVSG PPVTVNRERA VSVNADEQGR PVEGGDKAPE KPLLLKGPSL PKAEVSASEE KTGSASGPMP VMKVPPKEPP RTVPVAAPEQ
0601: SNTAPIKSEQ EPERVIQRTP GRSDYSGERG KSVPTDSGSA DAEQAKRAAS TSSAPSPRDV PRKYHGPLFD FPSFTRKHDS MPPANYNGSL ALGYDLKDLL
0701: AQEGMMVLGK KREDNLKKIS GLLSINLERK RIRPDLVLRL QIEEKKLKLL ERQARMRDEV EEVQQEIMAM PDRVYRKFVK QCERQRVELI RQVQQTQKAS
0801: REKQLKSIFQ WRKKLLEAHW AIRDARITRN RGVAKYHERL LREFSKKKDD DRSKRMEALK NNDVERYRQI LLEQQTSVPG DAAQRYNVLS SFLSQTEEYL
0901: YKLGGKITAT KNQQQVEEAA NAAAAAARAQ GLSEEEVKAA AQCAGQEVMI RNTFSEMNAP REENASVNKY YMLAHAVSEK VTKQPSLLRL GTLRDYQLVG
1001: LQWMLSLYNN KLNGILADEM GLGKTVQVMA LIAYLMEFKG NYGPHLIIVP NAVLVNWKSE LLNWLPSASC IFYVGAKDQR QKLFSQEVLA VKFNVLVTTY
1101: EFVMFDRSKL SRIDWKYIII DEAQRMKDRE SVLARDLDRY RCQRRLLLTG TPLQNDLKEL WSLLNLLLPE VFDNRKAFQD WFSKPFQRDA PTPSEEDDWL
1201: ETEKKVIIIH RLHQILEPFM LRRRVEDVEG SLPRKDSIVL RCKMSAIQGA IYDWIKSTGT IRVDPEDEKI RIQRNPMYQA KTYKNLQNKC MELRKVCNHP
1301: LLSYPFMNYY GKDFIIRSCG KLWNLDRILI KLHRSGHRVL LFSTMTKLLD ILEDYLQWRQ LAYRRIDGTT SLEDRESAIV DFNRPGSECF IFLLSIRAAG
1401: RGLNLQSADT VVIYDPDPNP QNEEQAVARA HRIGQTREVK VIYMEAVVDN ISSYQKEDEL RNGGSGDLED DLAGKDRYMG SIESLIRNNI QQYKIDMADE
1501: VINAGRFDQR TTHEERRMTL ETLLHDEERY QESLHDVPSL QQVNRMIART EEEVELFDQM DEEFDWTGDM MKHNQVPKWL RVGSTDVDCV VASLTKKPAR
1601: NASGSAPDNG DKLEKRRGRP TGSGKYSIYR EYEDEDDEES EEDDEERNTP SHPEEEAGES EEEEENDDSV PDDDNKDQSE EEEPNNDVGY DLQHGTGSGK
1701: AHKSEEAGST GSSSGSRRLP PPAPSSSLKK LRSLSALDSR PGTFSKRTPD DLEDGEIALS GDSHMDLQQS GSWNHERDDG EDEQVLQPKI KRKRSLRTRP
1801: RPNTDKQEDR SGADGTFPQR GARLLFPGDG DYDSQQDAHA LADPTSRQQD TVHPIVKQKR NMPSGKASPA SRAGKSTHLS GSAEGSAEHP KQNWSNKVIN
1901: SAGTKMSDSM QRKCKNVISK LWRRIGKEGH QKIPNIASWW RRNENSSSKG VAGSTLDLQK IELRVDGLEY SGVAEFIADM QQMLKSVVQH FGYRHEVRVE
2001: AEILHNLFFN IMKIAFPDSD FQEVKDSLSF SNPGGGAGST AAPSAKHLAS GLKRRSATTE AEQHGPGSGK HSHHVSAGEA PSRAKPERDS RHSGSGSRDQ
2101: SLDSPGLPLH PGDLFIVKKK RQDRVRTSVG SPSSSGPRGP LSPTNTGRLG PVPSPRGART PLQRDSHPSQ QSMPGWGAHA DRGGSSPPGI GDIHWAKPAK
2201: RQRTDTGKRR PSHL
Best Arabidopsis Sequence Match ( AT2G46020.6 )
(BLAST)
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQVKFEKF NVLVTTYEFI MYDRSKLSKV
1101: DWKYIIIDEA QRMKDRESVL ARDLDRYRCQ RRLLLTGTPL QNDLKELWSL LNLLLPDVFD NRKAFHDWFA QPFQKEGPAH NIEDDWLETE KKVIVIHRLH
1201: QILEPFMLRR RVEDVEGSLP AKVSVVLRCR MSAIQSAVYD WIKATGTLRV DPDDEKLRAQ KNPIYQAKIY RTLNNRCMEL RKACNHPLLN YPYFNDFSKD
1301: FLVRSCGKLW ILDRILIKLQ RTGHRVLLFS TMTKLLDILE EYLQWRRLVY RRIDGTTSLE DRESAIVDFN DPDTDCFIFL LSIRAAGRGL NLQTADTVVI
1401: YDPDPNPKNE EQAVARAHRI GQTREVKVIY MEAVVEKLSS HQKEDELRSG GSVDLEDDMA GKDRYIGSIE GLIRNNIQQY KIDMADEVIN AGRFDQRTTH
1501: EERRMTLETL LHDEERYQET VHDVPSLHEV NRMIARSEEE VELFDQMDEE FDWTEEMTNH EQVPKWLRAS TREVNATVAD LSKKPSKNML SSSNLIVQPG
1601: GPGGERKRGR PKSKKINYKE IEDDIAGYSE ESSEERNIDS GNEEEGDIRQ FDDDELTGAL GDHQTNKGEF DGENPVCGYD YPPGSGSYKK NPPRDDAGSS
1701: GSSPESHRSK EMASPVSSQK FGSLSALDTR PGSVSKRLLD DLEEGEIAAS GDSHIDLQRS GSWAHDRDEG DEEQVLQPTI KRKRSIRLRP RQTAERVDGS
1801: EMPAAQPLQV DRSYRSKLRT VVDSHSSRQD QSDSSSRLRS VPAKKVASTS KLHVSSPKSG RLNATQLTVE DNAEASRETW DGTSPISSSN AGARMSHIIQ
1901: KRCKIVISKL QRRIDKEGQQ IVPMLTNLWK RIQNGYAAGG VNNLLELREI DHRVERLEYA GVMELASDVQ LMLRGAMQFY GFSHEVRSEA KKVHNLFFDL
2001: LKMSFPDTDF REARNALSFS GSAPTLVSTP TPRGAGISQG KRQKLVNEPE TEPSSPQRSQ QRENSRIRVQ IPQKETKLGG TTSHTDESPI LAHPGELVIC
2101: KKKRKDREKS GPKTRTGGSS SPVSPPPAMI GRGLRSPVSG GVPRETRLAQ QQRWPNQPTH PNNSGAAGDS VGWANPVKRL RTDSGKRRPS HL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.