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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana nucleus, plastid 67.38 64.87
GSMUA_Achr1P24350_001 Banana nucleus 64.31 64.73
OQU84199 Sorghum nucleus 57.04 57.71
VIT_15s0046g02290.t01 Wine grape plastid 59.83 56.74
Zm00001d014977_P002 Maize nucleus 56.43 55.99
KRH06623 Soybean nucleus 55.82 54.38
KRH48113 Soybean nucleus 56.29 54.27
HORVU6Hr1G006050.1 Barley plastid 55.64 53.93
TraesCS6B01G048200.2 Wheat nucleus, plastid 55.45 53.85
TraesCS6A01G034200.2 Wheat nucleus, plastid 55.5 53.77
TraesCS6D01G039800.1 Wheat nucleus, plastid 55.41 53.73
KRH00799 Soybean nucleus 55.13 53.24
KRH40427 Soybean nucleus 54.71 52.84
Solyc01g094800.2.1 Tomato nucleus 54.57 52.37
Bra000409.1-P Field mustard plastid 52.66 52.27
CDY37083 Canola plastid 51.26 52.16
CDY27338 Canola nucleus, plastid 51.03 52.04
CDX83383 Canola nucleus, plastid 51.77 52.04
Bra039296.1-P Field mustard plastid 51.82 52.04
AT2G46020.3 Thale cress plastid 53.08 51.94
CDY71637 Canola nucleus 17.15 49.73
CDX95672 Canola plastid 24.79 49.26
CDX95673 Canola cytosol 22.27 48.58
GSMUA_AchrUn_... Banana cytosol 7.08 31.34
GSMUA_Achr3P26090_001 Banana cytosol 10.16 28.72
GSMUA_Achr3P23910_001 Banana nucleus 12.35 24.79
GSMUA_Achr6P02430_001 Banana cytosol 10.34 24.58
GSMUA_Achr8P09960_001 Banana nucleus 12.35 24.51
GSMUA_Achr4P25930_001 Banana cytosol 8.81 23.42
GSMUA_Achr6P20210_001 Banana nucleus 15.0 21.96
GSMUA_Achr8P06840_001 Banana nucleus 13.37 20.8
GSMUA_Achr8P00120_001 Banana nucleus 12.35 18.13
GSMUA_Achr8P29610_001 Banana nucleus 13.23 16.9
GSMUA_Achr4P21270_001 Banana cytosol 10.81 16.82
GSMUA_AchrUn_... Banana cytosol, nucleus 1.82 11.75
GSMUA_Achr6P29570_001 Banana nucleus 11.56 11.58
GSMUA_Achr3P26510_001 Banana nucleus 8.67 11.43
GSMUA_Achr9P11210_001 Banana nucleus 10.9 11.37
Protein Annotations
Gene3D:1.20.920.10MapMan:12.4.1.1.3Gene3D:3.40.50.10810Gene3D:3.40.50.300InterPro:BRMInterPro:Bromodomain
InterPro:Bromodomain-like_sfncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006355GO:GO:0008094GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0040029GO:GO:0043044EnsemblPlantsGene:GSMUA_AchrUn_randomG08810_001
EnsemblPlants:GSMUA_AchrUn_randomP08810_001EnsemblPlants:GSMUA_AchrUn_randomT08810_001InterPro:Gln-Leu-Gln_QLQInterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001487
InterPro:IPR001650InterPro:IPR014001InterPro:IPR014978InterPro:IPR036427InterPro:IPR038718UniProt:M0U7J1
InterPro:P-loop_NTPasePFAM:PF00176PFAM:PF00271PFAM:PF00439PFAM:PF08880PFscan:PS51192
PFscan:PS51194PFscan:PS51666PANTHER:PTHR10799PANTHER:PTHR10799:SF577SMART:SM00487SMART:SM00490
SMART:SM00951InterPro:SNF2-like_sfInterPro:SNF2_NSUPFAM:SSF47370SUPFAM:SSF52540UniParc:UPI000296E701
SEG:seg:::::
Description
ATP-dependent helicase BRM [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08810_001]
Coordinates
chrchrUn_random:-:40253474..40268785
Molecular Weight (calculated)
241951.0 Da
IEP (calculated)
8.605
GRAVY (calculated)
-0.697
Length
2146 amino acids
Sequence
(BLAST)
0001: MQALQQHEYQ QQVQQQLRKA DGDRTLLTYQ SGGTHGIIGG NSFPSLQGTM NLSQPSRKFG DLTHQPVAPQ LCEENSNKGQ HVQNPIHQAY LQFALKASQN
0101: KPHGNLLMHQ QGKMNMAAPT GSQSMSMNNI KMQELMSPQA ANQSQAYIFN RTGEQCAHAD KQLEQGHVST EQRSDSKQSP LMAGQLGLTN MVGATQSRHS
0201: QASTQNIATN QFTMAQMQAM QLWAKENNVD LSVPANINLI AQVLSHWQSN RMAAMQKQSE PSTIVQQSCP PSSKQSSISS PENDKSAYVN CISDYSSQVG
0301: PSQVRQPLAA DTIPGGDSTS VNPNDFQIQQ AHAHQRDNEN ERPVRPSFTT TNIRQIMHLP QSSGSKTQTM EQSYAKHTYT GNNMQQMQHI RSLQQMNQPI
0401: SQMAVAPTDA MSTQVSSLSG SVEVPNQRVG FTKQQLYALK AQILAFRRLK RGERTLPPEV IQAIAGLPVD SQPQQSFVQP GTGIQEKSIM NSTKEHTCAE
0501: TNDQALQPVP SSMASSLPKE EPGSWEEKAG IASQVQEIGG STKEPVQIGA VAKSEENISI VIPEQEVGRG DQNVPINGDN YSDKGKAIPV DCGKINAGQV
0601: KKSTLNTTPS PKVGVTRNYH GPIFDFPSFI RKHDSMGSAA HSNHMTVSYD VKNMLLEEGK VILSKKRIEN LKKISGLLAV NLERRRIKPD LVIRLQIEEK
0701: KLKLLDLQAR LRDEVDQQQQ EIMTMSDRPY RKFIRQCERH RVELLRQVQQ MQKASREKQL KSIFLWRKKL LETHWAIRDA RTTRNRGVAK YHEKMLREFS
0801: KKKDDGRNRR MEALKNNDVD RYREMLLEQQ NNVPGDAAQR YEVLSSFLSQ TEEYLHKLGG KIAAAKSHQE VQEAANAAAA AARAQGLSEE EVRAAAACAG
0901: EEVMIRHRFS EMNAPKDSSS AKKYYNLAHA LTERVVRQPS MLRYGTLRDY QLVGLQWMLS LYNNKLNGIL ADEMGLGKTV QVMALIAYLM EFKRNYGPHL
1001: IIVPNAVLVN WKSELLNWLP SISCIFYVGG KDERARLFSQ EVCAIKFNVL VTTYEFVMYD RSKLSKIDWK YIIIDEAQRM KDRESVLARD LDRYRCQRRL
1101: LLTGTPLQND LKELWSLLNV LLPEIFDNRK AFHDWFSKPF QKDGPSHNPE EDDWLETEKK VIIIHRLHQI LEPFMLRRRV EDVEGSLPPK ASIMSLSAIY
1201: DWIRSTGTLR VDPEDEMRKV QKNPMYQVKM YKNLNNRCME LRKVCNHPLL NYPYFNDYSK NFIVRSCGKL WILDRILIKL HKAGHRVLLF STMTKLLDIL
1301: EEYLHWRRLV YRRIDGTTPL EDRESAIVDF NSPDSDCFIF LLSIRAAGRG LNLQTADTVV IYDPDPNPQN EEQAVARAHR IGQTREVKVI YLEAVVDKVS
1401: SYQKEDEMRT GDMADEVINA GRFDQRTTHE ERRLTLETLL HDEERYQETL FDQMDEELDW TGDVVKYNEV PKWLRVSSRE LDSVVASLSK KPSKNILSST
1501: IELESNGMPS GSSPNKTDRR RGRPKSSTAK KYPTYRESDD EENGDSDVDT DERNTFEEEG DVGEFEDEEF YGAGDVLPSN KDQAEEGLVC DSGGDEFSLA
1601: MEGSKDVHAF DEAGSTGSSS GSRRLLQPVT PNTPSQKFGL ISALDARPSP LKRMPDELEE GEIAVSGDSL MDLHQSDSLV YDHDDLDDEQ VVQPKIKRKR
1701: SIRLRPRYSM ERTEDKSSSH RAPFHHGSWP LLQAKHEKLA EFNAEEFEAF GEAGSGSQDR SSPPLKQRCT LPSRVISPPV VQKSGRMSAS VEDGYDHSIE
1801: SWSSKAISSS GPSFVATRMT DSTQRKCKNV ISKLQRRIQK EGNQLVPFLS EWWRRNENSI FVSPGATSSN LLDLKRIEQR VDNSEYNDVM DFIADLQLML
1901: KNIVRHCNYL CEVKYEAGKL QDMFFDIMKI AFPDTDFREA KNAVTFSSSS GAATPSPRLA SADEAKRQAP TKTETGSGPG KALAHGSIPA HDERKTRSCA
2001: SKIHKESRSI GASARQQVPE CSQVLAHPGD LVICKKKRKD RDKCAMKQVS GPTSPSNPGR MTPLAPTNKG SLGLVTAPSM VRNNGAPIQG DSRPSQQAIS
2101: PLGRAHHEKQ QVDRGSGVLP SIRDVKWAKP VKRMRTDTGK RRPSQM
Best Arabidopsis Sequence Match ( AT2G46020.4 )
(BLAST)
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.