Factsheet for Bra039296.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37083	Canola	plastid	98.22	99.53
CDY27338	Canola	nucleus, plastid	96.07	97.58
Bra000409.1-P	Field mustard	plastid	89.85	88.81
AT2G46020.3	Thale cress	plastid	89.75	87.46
VIT_15s0046g02290.t01	Wine grape	plastid	68.65	64.83
KRH48113	Soybean	nucleus	65.33	62.71
KRH06623	Soybean	nucleus	64.34	62.41
KRH40427	Soybean	nucleus	63.97	61.52
KRH00799	Soybean	nucleus	63.73	61.3
Solyc01g094800.2.1	Tomato	nucleus	62.75	59.97
OQU84199	Sorghum	nucleus	53.91	54.31
GSMUA_AchrUn_...	Banana	nucleus, plastid	56.01	53.7
GSMUA_Achr1P24350_001	Banana	nucleus	53.16	53.28
Zm00001d014977_P002	Maize	nucleus	53.81	53.17
HORVU6Hr1G006050.1	Barley	plastid	54.66	52.76
TraesCS6A01G034200.2	Wheat	nucleus, plastid	54.61	52.69
TraesCS6D01G039800.1	Wheat	nucleus, plastid	54.52	52.64
TraesCS6B01G048200.2	Wheat	nucleus, plastid	54.42	52.62
GSMUA_AchrUn_...	Banana	nucleus	52.04	51.82
Bra012099.1-P	Field mustard	cytosol	10.76	29.83
Bra040237.1-P	Field mustard	nucleus	15.21	29.55
Bra040221.1-P	Field mustard	nucleus	12.82	26.12
Bra020751.1-P	Field mustard	nucleus	12.73	25.83
Bra002173.1-P	Field mustard	nucleus	12.73	25.56
Bra023689.1-P	Field mustard	nucleus	12.63	24.52
Bra017422.1-P	Field mustard	cytosol	8.66	24.28
Bra004881.1-P	Field mustard	nucleus	5.94	19.63
Bra011311.1-P	Field mustard	nucleus	10.81	19.03
Bra037150.1-P	Field mustard	nucleus	10.58	18.85
Bra014632.1-P	Field mustard	cytosol	13.1	18.49
Bra007318.1-P	Field mustard	nucleus	12.68	18.11
Bra007814.1-P	Field mustard	nucleus	11.51	18.02
Bra037208.1-P	Field mustard	nucleus	13.85	17.56
Bra034727.1-P	Field mustard	nucleus	13.52	14.31
Bra027574.1-P	Field mustard	nucleus	13.8	13.28
Bra000114.1-P	Field mustard	nucleus	16.99	11.08

Protein Annotations

Gene3D:1.20.920.10	MapMan:12.4.1.1.3	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	InterPro:BRM	EnsemblPlantsGene:Bra039296
EnsemblPlants:Bra039296.1	EnsemblPlants:Bra039296.1-P	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008094	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0040029
GO:GO:0043044	InterPro:Gln-Leu-Gln_QLQ	InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001487	InterPro:IPR001650
InterPro:IPR014001	InterPro:IPR014978	InterPro:IPR036427	InterPro:IPR038718	UniProt:M4FDX5	InterPro:P-loop_NTPase
PFAM:PF00176	PFAM:PF00271	PFAM:PF08880	PFscan:PS51192	PFscan:PS51194	PFscan:PS51666
PANTHER:PTHR10799	PANTHER:PTHR10799:SF577	SMART:SM00297	SMART:SM00487	SMART:SM00490	SMART:SM00951
InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF47370	SUPFAM:SSF52540	UniParc:UPI0002544624	SEG:seg

Description

AT2G46020 (E=0.0) CHR2, ATBRM, BRM, CHA2 | transcription regulatory protein SNF2, putative

Coordinates

chrA04:+:18696985..18705235

Molecular Weight (calculated)

238249.0 Da

IEP (calculated)

9.092

GRAVY (calculated)

-0.786

Length

2137 amino acids

Sequence
(BLAST)

0001: MQSGGSGGGP ARNPGMGPAG RTNSTSSAAS PTSSSSSVQQ QQHLASRQQQ QQGRNSEAND GMFAYHPGGV QGMMGGGNFG SSSGSMQQPQ QPRRLFDSPQ
0101: QQQGSSQEGQ QSFNPMQQAY LQFALQAQQQ KAQQQARMGM MGSSKDQDAR MGMLNMQGAM PMQASNQAQG SSSNPSAEQF ARGERQMESG HETKPHPQQV
0201: GTGQLMPGNI TRPMQAPQGP QGVNNMGTNQ LAFSQQWQAM QAWARERNID LSHPANASQM SHILQGRMVA QQKANEGNVA SQSPSIPVSS QPSSSSGVPG
0301: ENSPRPNSAG DISGQSGSGK ARHAIPTSSF ASTSSPRMMN PAANPFSAQG RDNPPYPRHL VQPTNGMPSG NSMQTSANET HVLDHNASTN KGLGSAEHLQ
0401: MQQPRQMNAP SPKAVISDAG LLNKSSLQSG QGIKQEQQRS GFTKQQLHVL KAQILAFRRL KKGEGSLPQE LFKSIAPPPL EVQTPLQIFP VRVHGQDRSS
0501: DKTVENQARS LESGKESQTA ASSNGQIFAK EEDNVGGTEV PLATGHSQLF QNLGKEAAST AAATKEEQQA DVFPVKSDQG ADASTQQTPR SDSNADKGKA
0601: VASDGGQSNV PPQANSPQQP KDTAPARKYH GPLFDFPFFT RKHDTYGSAT ANANNNLTLA YDIKDLVCEE GAEFFNKKRT DSLNKINGLL ATNLERKRIR
0701: PDLVLRLQIE EKKLRLSALQ SRVRDEVDRQ QQDIMSMPDR PYRKFVRLCE RQRLEMNRQV LANQKAVREK QLKTIFQWRK KLLEAHWAIR DARTARNRGV
0801: AKYHEKMLRE FSKRPDDGRN KRMEALKNND VERYREMLLE QQTNIPGDAA ERYNVLSSFL TQTEDYLHKL GGKITATKNQ QEVEEAANAA AIAARLQGLS
0901: EEEVRAAAAC AREEVLIRNR FVEMNAPKDN SSVNKYYTLA HAVNEVVVRQ PSMLQAGTLR DYQLVGLQWM LSLYNNKLNG ILADEMGLGK TVQVMALIAY
1001: LMEFKGNYGP HLIIVPNAVL VNWKSELHTW LPSVSCIYYV GTKDQRSKLF SQEVCAMKFN VLVTTYEFIM YDRSKLSKVD WKYIVIDEAQ RMKDRESVLA
1101: RDLDRYRCQR RLLLTGTPLQ NDLKELWSLL NLLLPDVFDN RKAFHDWFAQ PFQREGPSHN IEDDWLETEK KVIVIHRLHQ ILEPFMLRRR VEDVEGSLPP
1201: KVSVVLRCRM SSIQSAVYDW IKATGTLRVD PDDEKLKAQK NPIYQAKIYK TLNNRCMELR KTCNHPLLNY PYFNDLSKDF LVRSCGKLWI LDRILIKLQR
1301: TGHRVLLFST MTKLLDILEE YLQWRRLVYR RIDGTTSLED RESAIVDFND PDTDCFIFLL SIRAAGRGLN LQTADTVVIY DPDPNPKNEE QAVARAHRIG
1401: QTREVKVIYM EAVVEKISSH QKEDELRSGG SMDLEDDLAG KDLINAGRFD QRTTHEERRM TLETLLHDDE RYQETVHDVP SLHEVNRMIA RSEEEVELFD
1501: QMDEEFDWTE EMTCHEQVPK WLRASTREVN TTVADLSKKP SKNMLSSSNL IVQTGGPGGE RKRGRPKSKK INYKEIEDDI GLFSEESSEE VNVDSGNEEE
1601: GDIGQSDDDE LTGALGDQQT NNGESDGENP VAGYDYPPRS GSYKKVPPQD DAGSSESSPE SHRSKEMASP VSSKKFGSLS ALDTRPGSVS KRLVDDLEDG
1701: EIGASGDSHI DLQRSYDRDE GGGEQVLQPT IKRKRSIRLR PRQTAEGTDV SDVPAAQPLQ VDRSYRSKLR TVADSHGSRQ DQSDSSSRLR SLPAKKVANT
1801: SKLHVSSPKS GRLNATQLPV EDNDEAARET WDGTSPIGSS NAGARMSHTI QKRCKTVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE
1901: IDQRVERLEY VGVMELASDV QYMLRGAMQF YGFSHEVRSE ARKVHNLFFD LLKMSFPDTD FREARNALSF SGPSPTLVST SSPRGAVGIS QGKRPKPVDE
2001: EEPEEPSSPQ RRQQRENSRI RVQIPQKDPK LGGTSSHTDE SPILAHPGEL VICKKKRKDR EKSAPRTRTA GSSSPVSPQA MIGRGLRSPV SGSVTRETRL
2101: AQATHPNNSG AAGDSVGWAN PVKRLRTDSG KRRPSHL

Best Arabidopsis Sequence Match ( AT2G46020.4 )
(BLAST)

0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL

Arabidopsis Description

BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.