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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 4
  • plastid 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH48113 Soybean nucleus 74.15 75.38
KRH06623 Soybean nucleus 73.22 75.22
KRH00799 Soybean nucleus 72.65 73.99
KRH40427 Soybean nucleus 72.43 73.76
Solyc01g094800.2.1 Tomato nucleus 69.42 70.26
Bra000409.1-P Field mustard plastid 66.33 69.43
AT2G46020.3 Thale cress plastid 67.26 69.4
CDX83383 Canola nucleus, plastid 65.18 69.09
Bra039296.1-P Field mustard plastid 64.83 68.65
CDX95673 Canola cytosol 29.83 68.6
CDY37083 Canola plastid 63.85 68.52
CDY27338 Canola nucleus, plastid 63.46 68.25
CDX95672 Canola plastid 30.58 64.07
CDY71637 Canola nucleus 20.81 63.65
GSMUA_AchrUn_... Banana nucleus, plastid 62.0 62.94
OQU84199 Sorghum nucleus 58.51 62.42
GSMUA_Achr1P24350_001 Banana nucleus 58.37 61.96
Zm00001d014977_P002 Maize nucleus 58.11 60.8
TraesCS6A01G034200.2 Wheat nucleus, plastid 58.59 59.86
GSMUA_AchrUn_... Banana nucleus 56.74 59.83
TraesCS6B01G048200.2 Wheat nucleus, plastid 58.33 59.73
TraesCS6D01G039800.1 Wheat nucleus, plastid 58.33 59.65
HORVU6Hr1G006050.1 Barley plastid 58.2 59.49
VIT_05s0020g02960.t01 Wine grape nucleus 15.64 32.09
VIT_04s0023g01610.t01 Wine grape cytosol 10.21 30.43
VIT_05s0020g01780.t01 Wine grape nucleus 12.99 27.22
VIT_01s0010g02080.t01 Wine grape cytosol 8.75 27.2
VIT_15s0021g02180.t01 Wine grape cytosol 9.19 24.33
VIT_08s0007g09020.t01 Wine grape nucleus 12.77 18.56
VIT_04s0008g05880.t01 Wine grape nucleus 11.45 17.6
VIT_06s0009g03750.t01 Wine grape nucleus 13.39 17.19
VIT_08s0007g06370.t01 Wine grape nucleus 13.39 14.77
VIT_01s0011g01480.t01 Wine grape nucleus 13.65 14.33
VIT_05s0020g02020.t01 Wine grape nucleus 13.74 11.63
Protein Annotations
Gene3D:1.20.920.10EntrezGene:100249945wikigene:100249945MapMan:12.4.1.1.3Gene3D:3.40.50.10810Gene3D:3.40.50.300
InterPro:BRMInterPro:BromodomainInterPro:Bromodomain-like_sfProteinID:CCB62441ProteinID:CCB62441.1ncoils:Coil
UniProt:F6I645EMBL:FN596755GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006355GO:GO:0008094GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0040029GO:GO:0043044InterPro:Gln-Leu-Gln_QLQ
InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001487InterPro:IPR001650InterPro:IPR014001InterPro:IPR014978
InterPro:IPR036427InterPro:IPR038718EntrezGene:LOC100249945wikigene:LOC100249945InterPro:P-loop_NTPasePFAM:PF00176
PFAM:PF00271PFAM:PF08880PFscan:PS51192PFscan:PS51194PFscan:PS51666PANTHER:PTHR10799
PANTHER:PTHR10799:SF577SMART:SM00297SMART:SM00487SMART:SM00490SMART:SM00951InterPro:SNF2-like_sf
InterPro:SNF2_NSUPFAM:SSF47370SUPFAM:SSF52540TIGR:TC53232TIGR:TC64830TIGR:TC69707
UniParc:UPI000210AB58ArrayExpress:VIT_15s0046g02290EnsemblPlantsGene:VIT_15s0046g02290EnsemblPlants:VIT_15s0046g02290.t01unigene:Vvi.6721RefSeq:XP_002276245
RefSeq:XP_002276245.2SEG:seg::::
Description
No Description!
Coordinates
chr15:-:19083570..19096974
Molecular Weight (calculated)
253752.0 Da
IEP (calculated)
9.500
GRAVY (calculated)
-0.757
Length
2263 amino acids
Sequence
(BLAST)
0001: MQSGGGPGRN PAVGPPGRAT STSSASPSSS SSAVSTPHLG FDSIQQQQQQ QQQQSRQSLQ QQLLRKPEGN EALLAYPGGG LQGVMGGGNF ASSSSSMQLP
0101: QQPRKFIDLA QQHGASHIRE DNQNKSQGVE QPVLNPVHQA YLQYAFQAAH QKSALGMQPQ QQAKMGMVGP PSWKDQDARM GNLKMQDLIS IQAANQAQAS
0201: SSKKPAEHYA RGEKQMEQVQ APISDQRSES KPPTMPTAVG QLMPGNVTRP MQSVQNQQSI QNMANNQLAV AAQLQAMQAW ALERNIDLSL PANANLMAQL
0301: IPLMQTRMVT QPKPNESNMG AQPSPVQGPK QQVTSPPVAS ENSPHGNSSS DVSGQSGSAK ARQTVPPSPF GSNPNAAIVN NTNNIPVQQF SVQGRESQVP
0401: PRQSVVIGNG MSPMHPPQPS VNMSQGVDHP LHAKNTLSGQ ESLQMQYLRQ LNRSSPQSAV PPNDGGLGNH YQSQGGPLPQ VPQQRFGFTK QQLHVLKAQI
0501: LAFRRLKKGE GTLPQELLRS IAPPPLESQL QQAFLPSTAI NQDKSAGKNV EDHGRQLESN EKDSQAVPST NGHNFSKEEA FAGDDKATPS TVHMPGAPTV
0601: MKEPIPVLSA GKEEPQTTAF SVKSDQEFER GIQKTPIRSD FAPDRGKAVA PQVGVPDSLQ VKKPVQTSST PQQKDAGSTR KYHGPLFDFP FFTRKHDSFG
0701: SAMMVNNNSN LTLAYDVKDL LFEEGMEVLN KKRTENLKKI SGLLAVNLER KRIRPDLVLR LQIEERKLRL LDLQARLRDE VDQQQQEIMA MPDRPYRKFV
0801: RLCERQRMEL MRQVQVSQKA MREKQLKSIF QWRKKLLEAH WAIRDARTAR NRGVAKYHER MLREFSKRKD DDRNRRMEAL KNNDVERYRE MLLEQQTSIP
0901: GDAAERYAVL SSFLTQTEEY LHKLGSKITA AKNQQEVEEA ANAAAAAARA QGLSEEEVRT AATCAGEEVM IRNRFIEMNA PKESSSVNKY YTLAHAVNER
1001: VMRQPSMLRA GTLRDYQLVG LQWMLSLYNN KLNGILADEM GLGKTVQVMA LIAYLMEFKG NYGPHLIIVP NAVLVNWKSE LHNWLPSVSC IYYVGGKDQR
1101: SKLFSQEVCA MKFNVLVTTY EFIMYDRSKL SKVDWKYIII DEAQRMKDRE SVLARDLDRY RCQRRLLLTG TPLQNDLKEL WSLLNLLLPE VFDNRKAFHD
1201: WFSKPFQKEG PTHNAEDDWL ETEKKVIIIH RLHQILEPFM LRRRVEDVEG SLPPKVSIVL RCKMSAIQGA IYDWIKSTGT LRVDPEDEKR RVQKNPIYQA
1301: KVYKTLNNRC MELRKACNHP LLNYPYFNDF SKDFLVRSCG KMWILDRILI KLQRTGHRVL LFSTMTKLLD ILEEYLQWRR LVYRRIDGTT SLEDRESAIV
1401: DFNSAGSDCF IFLLSIRAAG RGLNLQSADT VVIYDPDPNP KNEEQAVARA HRIGQTREVK VIYMEAVVDK ISSHQKEDEF RSGGTVDSED DLAGKDRYIG
1501: SIESLIRNNI QQYKIDMADE VINAGRFDQR TTHEERRLTL ETLLHDEERY QETVHDVPSL QEVNRMIARS EDEVELFDQM DEELNWIEDM TRYDQVPKWL
1601: RASTRDVNIA VANLSKKPSK NTFFAANIGL ESSEKGSDLS PKTERKRGRP KGKPVYRELD DENGEFSEAS SDERNGYSAH EEEGEIGEFE DEEFSGAVGA
1701: QPSNKDQSEE DGRICDGGYE YLRALESTRN KHILDEAGSS GSSSDSRRLT QMVSPSISSR KFGSLSALDA RPSSLSKRLP DELEEGEIAV SGDSHMDHQQ
1801: SGSWIHDRDE GEDEQVLQPK IKRKRSIRIR PRHTVERPEE KSSNEKSSLQ RGDSSQLPMQ VDHKYEAQLR SDPEAKLFGE SNAFKHDQSD SSLKSRRNLP
1901: SRKIGNTSKL HASPKSGKLN CMSARAEDVA EHSREGWDGK VMNTGGPRMP EIMQRKCKNV ISKLQRRIDK EGHQIVPLLT DWWKRVENSG YISGPGNNIL
2001: DLRKIDQRID RLEYIGVMEL VFDVQQMLKN SMQYYGLSHE VRVEARKVHE LFFNILKIAF PDTDFREARN AISFSGPVST PASAPSPRQA AVGQGKRHKP
2101: INEVEPDPSP PPKQLLRGAA AAAAAAAAAS EDTRAKSHIS QKESRLGSSS SRDQDDSPLL THPGDLVISK KKRKDREKSA AKPRSGSSGP VSPPSMGRSI
2201: RSPGPGSMQK DGRSTQQATH QQAWASQPAQ QANGGSGGGG TVGWANPVKR MRTDAGKRRP SHL
Best Arabidopsis Sequence Match ( AT2G46020.4 )
(BLAST)
0001: MQSGGSGGGP ARNPAMGPAG RTASTSSAAS PSSSSSSVQQ QQQQQQQQQQ QQQLASRQQQ QQHRNSDTNE NMFAYQPGGV QGMMGGGNFA SSPGSMQMPQ
0101: QSRNFFESPQ QQQQQQQQGS STQEGQQNFN PMQQAYIQFA MQAQHQKAQQ QARMGMVGSS SVGKDQDARM GMLNMQDLNP SSQPQASSSK PSGDQFARGE
0201: RQTESSSQQR NETKSHPQQQ VGTGQLMPGN MIRPMQAPQA QQLVNNMGNN QLAFAQQWQA MQAWARERNI DLSHPANASQ MAHILQARMA AQQKAGEGNV
0301: ASQSPSIPIS SQPASSSVVP GENSPHANSA SDISGQSGSA KARHALSTGS FASTSSPRMV NPAMNPFSGQ GRENPMYPRH LVQPTNGMPS GNPLQTSANE
0401: TPVLDQNAST KKSLGPAEHL QMQQPRQLNT PTPNLVAPSD TGPLSNSSLQ SGQGTQQAQQ RSGFTKQQLH VLKAQILAFR RLKKGEGSLP PELLQAISPP
0501: PLELQTQRQI SPAIGKVQDR SSDKTGEDQA RSLECGKESQ AAASSNGPIF SKEEDNVGDT EVALTTGHSQ LFQNLGKEAT STDVATKEEQ QTDVFPVKSD
0601: QGADSSTQKN PRSDSTADKG KAVASDGSQS KVPPQANSPQ PPKDTASARK YYGPLFDFPF FTRKLDSYGS ATANANNNLT LAYDIKDLIC EEGAEFLSKK
0701: RTDSLKKING LLAKNLERKR IRPDLVLRLQ IEEKKLRLSD LQSRVREEVD RQQQEIMSMP DRPYRKFVRL CERQRLEMNR QVLANQKAVR EKQLKTIFQW
0801: RKKLLEAHWA IRDARTARNR GVAKYHEKML REFSKRKDDG RNKRMEALKN NDVERYREML LEQQTNMPGD AAERYAVLSS FLTQTEDYLH KLGGKITATK
0901: NQQEVEEAAN AAAVAARLQG LSEEEVRAAA TCAREEVVIR NRFTEMNAPK ENSSVNKYYT LAHAVNEVVV RQPSMLQAGT LRDYQLVGLQ WMLSLYNNKL
1001: NGILADEMGL GKTVQVMALI AYLMEFKGNY GPHLIIVPNA VLVNWKSELH TWLPSVSCIY YVGTKDQRSK LFSQEVCAMK FNVLVTTYEF IMYDRSKLSK
1101: VDWKYIIIDE AQRMKDRESV LARDLDRYRC QRRLLLTGTP LQNDLKELWS LLNLLLPDVF DNRKAFHDWF AQPFQKEGPA HNIEDDWLET EKKVIVIHRL
1201: HQILEPFMLR RRVEDVEGSL PAKVSVVLRC RMSAIQSAVY DWIKATGTLR VDPDDEKLRA QKNPIYQAKI YRTLNNRCME LRKACNHPLL NYPYFNDFSK
1301: DFLVRSCGKL WILDRILIKL QRTGHRVLLF STMTKLLDIL EEYLQWRRLV YRRIDGTTSL EDRESAIVDF NDPDTDCFIF LLSIRAAGRG LNLQTADTVV
1401: IYDPDPNPKN EEQAVARAHR IGQTREVKVI YMEAVVEKLS SHQKEDELRS GGSVDLEDDM AGKDRYIGSI EGLIRNNIQQ YKIDMADEVI NAGRFDQRTT
1501: HEERRMTLET LLHDEERYQE TVHDVPSLHE VNRMIARSEE EVELFDQMDE EFDWTEEMTN HEQVPKWLRA STREVNATVA DLSKKPSKNM LSSSNLIVQP
1601: GGPGGERKRG RPKSKKINYK EIEDDIAGYS EESSEERNID SGNEEEGDIR QFDDDELTGA LGDHQTNKGE FDGENPVCGY DYPPGSGSYK KNPPRDDAGS
1701: SGSSPESHRS KEMASPVSSQ KFGSLSALDT RPGSVSKRLL DDLEEGEIAA SGDSHIDLQR SGSWAHDRDE GDEEQVLQPT IKRKRSIRLR PRQTAERVDG
1801: SEMPAAQPLQ VDRSYRSKLR TVVDSHSSRQ DQSDSSSRLR SVPAKKVAST SKLHVSSPKS GRLNATQLTV EDNAEASRET WDGTSPISSS NAGARMSHII
1901: QKRCKIVISK LQRRIDKEGQ QIVPMLTNLW KRIQNGYAAG GVNNLLELRE IDHRVERLEY AGVMELASDV QLMLRGAMQF YGFSHEVRSE AKKVHNLFFD
2001: LLKMSFPDTD FREARNALSF SGSAPTLVST PTPRGAGISQ GKRQKLVNEP ETEPSSPQRS QQRENSRIRV QIPQKETKLG GTTSHTDESP ILAHPGELVI
2101: CKKKRKDREK SGPKTRTGGS SSPVSPPPAM IGRGLRSPVS GGVPRETRLA QQQRWPNQPT HPNNSGAAGD SVGWANPVKR LRTDSGKRRP SHL
Arabidopsis Description
BRMATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.