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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67658 Canola cytosol, nucleus 33.38 63.77
KRH42374 Soybean nucleus 62.68 62.48
KRH58495 Soybean nucleus 66.94 61.84
CDY68094 Canola nucleus 34.96 60.47
Solyc02g068560.2.1 Tomato nucleus 60.87 55.1
AT5G44800.1 Thale cress nucleus 55.59 53.94
Bra027574.1-P Field mustard nucleus 54.71 53.11
GSMUA_Achr9P11210_001 Banana nucleus 47.52 49.81
GSMUA_Achr6P29570_001 Banana nucleus 46.13 46.45
Zm00001d006428_P002 Maize nucleus 46.73 46.03
Zm00001d021541_P002 Maize nucleus 47.33 45.89
KXG36264 Sorghum nucleus 47.1 45.68
TraesCS2B01G251900.1 Wheat nucleus 46.22 44.49
TraesCS2D01G234200.1 Wheat nucleus 45.99 44.15
Os07t0497100-01 Rice nucleus 46.08 44.0
TraesCS2A01G227900.1 Wheat nucleus 45.76 43.96
VIT_04s0023g01610.t01 Wine grape cytosol 10.66 30.3
VIT_04s0008g05880.t01 Wine grape nucleus 18.5 27.11
VIT_05s0020g01780.t01 Wine grape nucleus 13.54 27.04
VIT_15s0021g02180.t01 Wine grape cytosol 10.43 26.32
VIT_01s0010g02080.t01 Wine grape cytosol 8.81 26.1
VIT_05s0020g02960.t01 Wine grape nucleus 12.84 25.11
VIT_06s0009g03750.t01 Wine grape nucleus 17.15 20.99
VIT_08s0007g09020.t01 Wine grape nucleus 12.1 16.76
VIT_08s0007g06370.t01 Wine grape nucleus 14.7 15.45
VIT_15s0046g02290.t01 Wine grape plastid 14.33 13.65
VIT_05s0020g02020.t01 Wine grape nucleus 13.17 10.62
Protein Annotations
MapMan:12.4.1.1.5Gene3D:2.40.50.40Gene3D:3.30.40.10Gene3D:3.40.50.10810Gene3D:3.40.50.300ProteinID:CCB51022
ProteinID:CCB51022.1InterPro:Chromo-like_dom_sfInterPro:Chromo/chromo_shadow_domInterPro:Chromo_domainInterPro:DUF1087UniProt:F6HF66
EMBL:FN595752GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0009506
GO:GO:0046872InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:Homeobox-like_sfInterPro:IPR000953InterPro:IPR001650
InterPro:IPR013083InterPro:IPR014001InterPro:IPR019787InterPro:IPR038718InterPro:P-loop_NTPasePFAM:PF00176
PFAM:PF00271PFAM:PF00385PFAM:PF00628PFAM:PF06465ScanProsite:PS01359PFscan:PS50013
PFscan:PS50016PFscan:PS51192PFscan:PS51194PANTHER:PTHR10799PANTHER:PTHR10799:SF939SMART:SM00249
SMART:SM00298SMART:SM00487SMART:SM00490SMART:SM01147InterPro:SNF2-like_sfInterPro:SNF2_N
SUPFAM:SSF46689SUPFAM:SSF52540SUPFAM:SSF54160SUPFAM:SSF57903UniParc:UPI000210A724ArrayExpress:VIT_01s0011g01480
EnsemblPlantsGene:VIT_01s0011g01480EnsemblPlants:VIT_01s0011g01480.t01unigene:Vvi.14316unigene:Vvi.14921InterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHD
InterPro:Znf_PHDInterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHDSEG:seg::
Description
No Description!
Coordinates
chr1:-:1272722..1291735
Molecular Weight (calculated)
238373.0 Da
IEP (calculated)
8.369
GRAVY (calculated)
-0.674
Length
2157 amino acids
Sequence
(BLAST)
0001: MKENGSMTSK MINRNWVLKR KRRKLPCGPD LSNGKEGTSI ASESTGNTSS AKRRLKGEAS SDRSALKKKG NDGYYFECVI CDLGGNLLCC DSCPRTYHLQ
0101: CLNPPLKRIP NGKWQCPKCC QKSDSLEPMS HLDSISKRAR TKIVSAKSKS EIKSSGTEKV SRIFGSSILG KKRSAVKAKS AISRKVCSIE KKLDSSQIDV
0201: SSSPKPSHPS VASGRKPDLS CDNGTSGNKL IHAMDAATRK ARKRKHKVNS DDSQKKSRTD KGKHAANTSK KSGSKANSMS PETSRSHRKR RTADKGVSAG
0301: LSKEDVGIKS SDVQKKNEKL PVEGTNPSHD VVEAGGNMDE TVTCEENVTG ELQQVDRVLG CRVQGDNTNS SCHISVTVPT DLPSDNVLIP ENQNRSPEEI
0401: LSGDVDLDGE TAEKLHEGSI DGKDQDQSAV TTENLRKQPT EKMVIEDSTN AKYGMAVINI CEEQWKQPQR VIALRASKDG TTEAFVKWNG LPYDECTWER
0501: LDEPVVEKSS HLIDAYNQFE KETLEKDAAK DDLPRGKGDG HQSDIVTLAE QPKELKGGSL FPHQLEALNW LRKCWHKSKN VILADEMGLG KTVSACAFLS
0601: SLYFEFKATL PCLVLVPLST MPNWLAEFSL WAPNLNVVEY HGCAKARAII RQHEWHGTDP NGSNKKTASY KFNVLLTTYE MVLADSSHLR GVPWEVLVVD
0701: EGHRLKNSGS KLFSLLNSFS FQHRVLLTGT PLQNNIGEMY NLLNFLQPAT FPSLFSFEEK FNDLTTAEKV EELKKLVAPH MLRRLKKDAM QNIPPKTERM
0801: VPVELSSIQA EYYRAMLTKN YQLLRNMGKG VAQQSMLNIV MQLRKVCNHP YLIPGTEPDS GSGEFLHEMR IKASAKLTLL HSMLKVLYKE GHRVLIFSQM
0901: TKLLDILEDY LTTEFGPRTF ERVDGSVSVA DRQAAIARFN QDKTRFVFLL STRSCGLGIN LATADTVIIY DSDFNPHADI QAMNRAHRIG QSNRLLVYRL
1001: VVRASVEERI LQLAKKKLML DQLFVNKSGS QKEVEDILRW GTEELFNDSS SVTGKDAGEN SCNKDDVIPD VEHKSKRKAG GLGDVYKDKC TDGSTKIVWD
1101: ENAIMKLLDR TNLQSSSPAE ADLENDMLGS VKSLEWNDEP TDEQGGTELP PVVTDDVSAQ NSERKEDNLV GTEENEWDKL LRIRWEKYQS EEEAALGRGK
1201: RQRKAVSYRE AYAPHPSETL SESGGEEDRE PEPEPEREYT PAGRALKAKF AKLRARQKER LAQRNAIERS CNVEEPSVTE PLLPFPPINA KDREQVTRLA
1301: QPVREKAPAI DLEDGKIGQP LDAMKGKADS NVRLGRQSRH KSHLDLSARA LGHPSPDIFL PSHHYQGTSY TNLVANNLLP VLGLCAPNAT QLESSHKNFS
1401: RSNGRQTRHG VGPEFPFCLA PCSGTSMEMD IKGHENASDK LRLLDASTDL PQLQRKNNNP DNCSPFGPSP PAAPQEKGSD YVERSGAGFS DFPEKMAMAN
1501: LPFDEKLLPR FPLPARSMPN PYPDFLPSLS LGTRVEAAND SVQDLSTMPL LPKFKFPPQD APRYNQQERE GPPTLGLGQT PATLSSFPEN HRKVLENIMM
1601: RTGSGSMNLF KKKSRVEGWS EDELDFLWIG VRRHGRGNWD AMLRDPRLKF SKYKTADDLS ARWEEEQLKI LEGPALPMPK SSKSTKGNKS SLFPSISDGM
1701: MMRALHGSRL GAPMKFQSHL TDMKLGFGDL ASSLPHFDPS HRLGLQNDHF SPVPHWNSDK FPTNFVRDSS SGPSDRPGTS SNIHMEQPFL LNSFGTSSLG
1801: SLGLTSSSSF DLLQKEDELG ATKYGKLPSL LDRSLNLLRD SHNNMGAGES TSSGLMPDPN KGLSLSNSKG KEVEGSSPSK NKLPHWLREA VSAPSKPPDP
1901: ELPPTVSAIA QSVRLLYGEE KPTIPPFVAP GPPPSLPKDP RLNLKKKKRR SHVLRRLSGD VAGTSWNFQS SLHGENFASS SVPLAPPFPL LPQNTAGASG
2001: LPWIEPNLNL PPLNINMMNP SSSSSFLKPQ KKSTGLSPSP EVLQLVASCV APGPHIPPVP GMPSSGFLDS KLPLPKFIDR GEFPDSTGAS GNQKGKQTST
2101: LSVHAPLNQE RREQIESGDS SSKTQSDPSH AEHPNVEEIS SEGTVSDHRV SDHEPEP
Best Arabidopsis Sequence Match ( AT5G44800.1 )
(BLAST)
0001: MKDSGSEMIK RDWVMKQKRR KLPSILDILD QKVDSSMAFD SPEYTSSSKP SKQRLKTDST PERNSSKRKG NDGNYFECVI CDLGGDLLCC DSCPRTYHTA
0101: CLNPPLKRIP NGKWICPKCS PNSEALKPVN RLDAIAKRAR TKTKKRNSKA GPKCERASQI YCSSIISGEQ SSEKGKSISA EESKSTGKEV YSSPMDGCST
0201: AELGHASADD RPDSSSHGED DLGKPVIPTA DLPSDAGLTL LSCEDLSESK LSDTEKTHEA PVEKLEHASS EIVENKTVAE METGKGKRKK RKRELNDGES
0301: LERCKTDKKR AKKSLSKVGS SSQTTKSPES SKKKKKKNRV TLKSLSKPQS KTETPEKVKK LPKEERRAVR ATNKSSSCLE DTNSLPVGNL QVHRVLGCRI
0401: QGLTKTSLCS ALSDDLCSDN LQATDQRDSL VQDTNAELVV AEDRIDSSSE TGKSSRDSRL RDKDMDDSAL GTEGMVEVKE EMLSEDISNA TLSRHVDDED
0501: MKVSETHVSV ERELLEEAHQ ETGEKSTVAD EEIEEPVAAK TSDLIGETVS YEFLVKWVDK SNIHNTWISE AELKGLAKRK LENYKAKYGT AVINICEDKW
0601: KQPQRIVALR VSKEGNQEAY VKWTGLAYDE CTWESLEEPI LKHSSHLIDL FHQYEQKTLE RNSKGNPTRE RGEVVTLTEQ PQELRGGALF AHQLEALNWL
0701: RRCWHKSKNV ILADEMGLGK TVSASAFLSS LYFEFGVARP CLVLVPLSTM PNWLSEFSLW APLLNVVEYH GSAKGRAIIR DYEWHAKNST GTTKKPTSYK
0801: FNVLLTTYEM VLADSSHLRG VPWEVLVVDE GHRLKNSESK LFSLLNTFSF QHRVLLTGTP LQNNIGEMYN LLNFLQPSSF PSLSSFEERF HDLTSAEKVE
0901: ELKKLVAPHM LRRLKKDAMQ NIPPKTERMV PVELTSIQAE YYRAMLTKNY QILRNIGKGV AQQSMLNIVM QLRKVCNHPY LIPGTEPESG SLEFLHDMRI
1001: KASAKLTLLH SMLKVLHKEG HRVLIFSQMT KLLDILEDYL NIEFGPKTFE RVDGSVAVAD RQAAIARFNQ DKNRFVFLLS TRACGLGINL ATADTVIIYD
1101: SDFNPHADIQ AMNRAHRIGQ SKRLLVYRLV VRASVEERIL QLAKKKLMLD QLFVNKSGSQ KEFEDILRWG TEELFNDSAG ENKKDTAESN GNLDVIMDLE
1201: SKSRKKGGGL GDVYQDKCTE GNGKIVWDDI AIMKLLDRSN LQSASTDAAD TELDNDMLGS VKPVEWNEET AEEQVGAESP ALVTDDTGEP SSERKDDDVV
1301: NFTEENEWDR LLRMRWEKYQ SEEEAALGRG KRLRKAVSYR EAYAPHTSGP VNESGGEDEK EPEPELKKEY TPAGRALKEK FTKLRERQKN LIARRNSVEE
1401: SLPSGNVDQV TEVANQDEES PTSMDLDDSK ASQQCDAQKR KASSSDPKPD LLSQHHHGAE CLPSLPPNNL PVLGLCAPNF TQSESSRRNY SRPGSRQNRP
1501: ITGPHFPFNL PQTSNLVERE ANDQEPPMGK LKPQNIKEEP FQQPLSNMDG WLPHRQFPPS GDFERPRSSG AAFADFQEKF PLLNLPFDDK LLPRFPFQPR
1601: TMGTSHQDIM ANLSMRKRFE GTGHSMQDLF GGTPMPFLPN MKIPPMDPPV FNQQEKDLPP LGLDQFPSAL SSIPENHRKV LENIMLRTGS GIGHVQKKKT
1701: RVDAWSEDEL DSLWIGIRRH GYGNWETILR DPRLKFSKFK TPEYLAARWE EEQRKFLDSL SSLPSKSSRT DKSTKSSLFP GLPQGIMNRA LHGKYATPPR
1801: FQSHLTDIKL GFGDLASPLP LFEPSDHLGF RSEHFPPMAN LCTDNLPGEP SAGPSERAGT STNIPNEKPF PLNSLGMGNL GSLGLDSLSS LNTLRAEEKR
1901: DAIKRGKLPL FLDMPLPQML DSSNNVFLGR SANPSFLHPN RGLNPSNPMG RDIMGISSSE NKLPHWLRNV VTVPTVKSPE PPTLPPTVSA IAQSVRVLYG
2001: EDSTTIPPFV IPEPPPPAPR DPRHSLRKKR KRKLHSSSQK TTDIGSSSHN AVESSSQGNP QTSATPPLPP PSLAGETSGS SQPKLPPHNL NSTEPLSSEA
2101: IIIPPPEEDS VIAAAPSEAP GPSLEGITGT TKSISLESQS SEPETINQDG DLDPETDEKV ESERTPLHSD EKQEEQESEN ALNKQCEPIE AESQNTNAEE
2201: EAEAQEEDEE SMKMVTGNSL SDD
Arabidopsis Description
CHR4PKR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UKW2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.