Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36264 | Sorghum | nucleus | 90.47 | 90.51 |
| Zm00001d006428_P002 | Maize | nucleus | 88.36 | 89.77 |
| Os07t0497100-01 | Rice | nucleus | 71.55 | 70.47 |
| TraesCS2B01G251900.1 | Wheat | nucleus | 70.79 | 70.28 |
| TraesCS2D01G234200.1 | Wheat | nucleus | 70.88 | 70.18 |
| TraesCS2A01G227900.1 | Wheat | nucleus | 70.7 | 70.07 |
| CDY67658 | Canola | cytosol, nucleus | 26.61 | 52.44 |
| CDY68094 | Canola | nucleus | 27.19 | 48.52 |
| VIT_01s0011g01480.t01 | Wine grape | nucleus | 45.89 | 47.33 |
| KRH42374 | Soybean | nucleus | 45.08 | 46.35 |
| GSMUA_Achr9P11210_001 | Banana | nucleus | 41.21 | 44.56 |
| KRH58495 | Soybean | nucleus | 45.84 | 43.68 |
| GSMUA_Achr6P29570_001 | Banana | nucleus | 41.03 | 42.62 |
| AT5G44800.1 | Thale cress | nucleus | 41.62 | 41.66 |
| Bra027574.1-P | Field mustard | nucleus | 41.44 | 41.49 |
| Solyc02g068560.2.1 | Tomato | nucleus | 43.87 | 40.96 |
| Zm00001d007978_P003 | Maize | cytosol | 9.75 | 27.54 |
| Zm00001d033827_P006 | Maize | cytosol | 10.2 | 26.77 |
| Zm00001d045109_P008 | Maize | cytosol | 15.73 | 26.24 |
| Zm00001d048552_P005 | Maize | cytosol | 10.25 | 25.22 |
| Zm00001d040831_P021 | Maize | nucleus | 12.58 | 25.0 |
| Zm00001d009312_P028 | Maize | nucleus | 12.58 | 24.78 |
| Zm00001d024816_P007 | Maize | cytosol | 12.04 | 24.14 |
| Zm00001d006798_P002 | Maize | nucleus | 11.82 | 23.57 |
| Zm00001d002656_P002 | Maize | nucleus | 9.35 | 21.25 |
| Zm00001d022405_P051 | Maize | nucleus | 16.04 | 20.71 |
| Zm00001d007089_P003 | Maize | nucleus | 14.74 | 18.88 |
| Zm00001d015595_P001 | Maize | cytosol | 1.48 | 16.75 |
| Zm00001d029180_P002 | Maize | nucleus | 11.28 | 16.46 |
| Zm00001d047471_P002 | Maize | nucleus | 11.37 | 16.15 |
| Zm00001d017660_P021 | Maize | nucleus | 13.08 | 14.11 |
| Zm00001d051507_P007 | Maize | nucleus | 13.03 | 14.07 |
| Zm00001d014977_P002 | Maize | nucleus | 12.63 | 12.99 |
| Zm00001d037346_P007 | Maize | nucleus | 14.38 | 8.4 |
Protein Annotations
| Gene3D:1.10.10.60 | Gene3D:1.20.920.10 | EntrezGene:103633189 | MapMan:12.4.1.1.5 | Gene3D:2.40.50.40 | Gene3D:3.40.50.10810 |
| Gene3D:3.40.50.300 | UniProt:A0A1D6IBX9 | InterPro:Bromodomain-like_sf | InterPro:Chromo-like_dom_sf | InterPro:Chromo/chromo_shadow_dom | InterPro:Chromo_domain |
| InterPro:DUF1087 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0046872 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:Homeobox-like_sf | InterPro:IPR000953 | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR017877 | InterPro:IPR019787 | InterPro:IPR036427 | InterPro:IPR038718 | InterPro:Myb-like_dom |
| ProteinID:ONM57431.1 | ProteinID:ONM57436.1 | ProteinID:ONM57438.1 | ProteinID:ONM57441.1 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFAM:PF00385 | PFAM:PF00628 | PFAM:PF06465 | ScanProsite:PS01359 | PFscan:PS50013 |
| PFscan:PS50016 | PFscan:PS50090 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF939 |
| SMART:SM00249 | SMART:SM00298 | SMART:SM00487 | SMART:SM00490 | SMART:SM01147 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | SUPFAM:SSF46689 | SUPFAM:SSF52540 | SUPFAM:SSF54160 | SUPFAM:SSF57903 | UniParc:UPI00084468E0 |
| InterPro:Zinc_finger_PHD-type_CS | EnsemblPlantsGene:Zm00001d021541 | EnsemblPlants:Zm00001d021541_P002 | EnsemblPlants:Zm00001d021541_T002 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | SEG:seg | : | : | : | : |
Description
PHD-transcription factor 26Protein CHROMATIN REMODELING 4
Coordinates
chr7:+:155404186..155420422
Molecular Weight (calculated)
247639.0 Da
IEP (calculated)
7.330
GRAVY (calculated)
-0.681
Length
2225 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKERSSLCES AADGNWGLKY KRKRSKLTVS PSNENEATSP TSDSRMSHGS TKKKLKHDNN ISPSAKKIRG HDGYFFECVE CDLGGNLLCC DSCPRVYHLE
0101: CLNPPLKRAP PGKWQCPRCR PKKVSLKLLG NADVDTSKRE KSTRTYASTA SDSPPSHTKV SFKTRNSTQD KTGLNEQGKE SSGGTMNGGE TSTKNNEVEK
0201: KKTLILHLKK RSTKELSENT KPSKSEFVEL SEEKIVKHGS VLKLKKHPHR MDLSPSKSKT RRQSSQRESK RSGTKKIKYS MSDDDSVSSS EPSTSLDNSE
0301: SPPKRKHSDG KAPSSSTKKG KKKVKFVEKK HSEHSNCATQ ICPNDAHVPA NMLQEQGVVG DKMMTTQEDQ QVDRILGCRL QMSQINPPSH ASLEQFESAN
0401: LQVDGMVLPH ASAGIPNRPH DGTESSRNGT IEDICADESA NHSGHNLEMR KDTDSKSHEK ESHKREQVKK ILSVCSGDET NIMKDDQVVR ENVSASKKGE
0501: DETSDLPAEK DDTILPVTRA CTMIRTNQDH TDESKQHGKI EQITNKDYND AGYEFLIKWV GKSNIHNSWV SESEVKILAK RKLENYKAKY GMSLINICKE
0601: QWCQPQRVIG LRASVDEVEE VLIKWCGLPY DECTWERSDE PTLMKYSHLV TQFKNFECQA LDKDVVKDYA NARNRHELNV LVDQPKELQG GMLFPHQLEA
0701: LNWLRKCWYK SKNVILADEM GLGKTVSACA FLSSLYCEFK INLPCLVLVP LSTMPNWMAE FSSWAPHLNV VEYHGSARSR SIIRQYEWHA GDASQIGKTK
0801: RSYKFNVLLT TYEMVLVDAA YLRSVSWEVL IVDEGHRLKN SSSKLFSLLN SFSFQHRVLL TGTPLQNNIG EMYNLLNFLQ PTSFPSLSSF EEKFNDLTTA
0901: EKVEELKKLV APHMLRRLKK DAMQNIPPKI ERMVPVELTS IQAEYYRAML TKNYQVLRNI GKGGAHQSLL NIVMQLRKVC NHPYLIPGTE PESGSPEFLH
1001: EMRIKASAKL TLLHLMLKIL HKEGHRVLIF SQMTKLLDIL EDYLTLEFGP KTFERVDGSV SVAERQAAIV RFNQDKTRFV FLLSTRSCGL GINLATADTV
1101: IIYDSDFNPH ADIQAMNRAH RIGQSNRLLV YRLVVRASVE ERILQLAKKK LMLDQLFVNK SESQKEVEDI IRWGTEELFG NSDSVDGKDN SEVPGPVADV
1201: EFKHRRKTGG LGDVYEDKCI GGSTKLVWDE NAILKLLDRS NLPSSMAEST DGDLDNDMLG TVKSIDWNDE LNDDPGTNED TAPIDNDGSE QASESKQGAT
1301: NRSEENEWDK LLRVRWEQYQ IEEEACLGRG KRLRKAVSYR ETFATLPNEA LSEDSDEGDE PKREYTAAGL ALKEKYGKLR ARQKERIAQR HIIKNYADDN
1401: LEEFMTPYDS IANEPAENPL VIVEDLNSSQ LSGAKRFSDS TGEMRQSSKK SKRYSEIPQD LYAKIPGNTA SFKHHSKATD VFNPGTPNHL LPVLGLCAPN
1501: ADQVNSYKNS ICAPSIKERK RASGDIVKQL STPADHSNVH RNEAQSASDK AIFPGASEEA LRRISNMIPD SYFPFSHIPP ISGKGVDPVE NPGPSIASFQ
1601: GNLGLPNFSL EDNAPLKHIK PIPDIFPSLS LGAHKDYIRS SVPELPDGSL LPNFMADITG TSKQKSFMSG LLPGLGLSPG QPIHSAMPDN HKKVLDNIMM
1701: RAQYASNKFL KKRSKLDYWS EDELDALWIG VRRHGRGNWD AMLRDPKLKF LNNRTSEELA LRWILEEQKI IDEPMSTSTR RSNSAAFPGI SDAMMSRALN
1801: ESNFSKMRME QPKLQSHLTD IQLGSSDILS TFPHVDAASY INSGEGGPSQ IPWQDFKHRS SYAGDFPAGA FDKLEKPDVG PIPPFMPNPF MTDSIGSLPI
1901: NRKNNSSIPH SEIRSSSREN ILSGVSDGQI NLLHEMQRRR RVRSGKEPIE MNLNHIDHSN LQLDNTSDLG GLKPNKLPHW LQEAVRAPSS KPPERELPAT
2001: VSAIAQSVCL LLGEQEPSIP PFLIPGTPLS RPKDPRINSK KKLRKAQQSN SHVEHSKIGS GEGDCVTTPA PPSIEASPAL PVDCDDGEPS LNLKSASLSS
2101: SAGSKGLDEL PPTFKEANQT VDGSEAVAAK SDAPEIGCQV PGSSPLHDKG SESSGSPVKD TPDAGIRLPG SDNSVMAFSA LPLVDEAPGT SSRAADTPVP
2201: CDGNESKEDV PLDNAESTRK LEPNG
0101: CLNPPLKRAP PGKWQCPRCR PKKVSLKLLG NADVDTSKRE KSTRTYASTA SDSPPSHTKV SFKTRNSTQD KTGLNEQGKE SSGGTMNGGE TSTKNNEVEK
0201: KKTLILHLKK RSTKELSENT KPSKSEFVEL SEEKIVKHGS VLKLKKHPHR MDLSPSKSKT RRQSSQRESK RSGTKKIKYS MSDDDSVSSS EPSTSLDNSE
0301: SPPKRKHSDG KAPSSSTKKG KKKVKFVEKK HSEHSNCATQ ICPNDAHVPA NMLQEQGVVG DKMMTTQEDQ QVDRILGCRL QMSQINPPSH ASLEQFESAN
0401: LQVDGMVLPH ASAGIPNRPH DGTESSRNGT IEDICADESA NHSGHNLEMR KDTDSKSHEK ESHKREQVKK ILSVCSGDET NIMKDDQVVR ENVSASKKGE
0501: DETSDLPAEK DDTILPVTRA CTMIRTNQDH TDESKQHGKI EQITNKDYND AGYEFLIKWV GKSNIHNSWV SESEVKILAK RKLENYKAKY GMSLINICKE
0601: QWCQPQRVIG LRASVDEVEE VLIKWCGLPY DECTWERSDE PTLMKYSHLV TQFKNFECQA LDKDVVKDYA NARNRHELNV LVDQPKELQG GMLFPHQLEA
0701: LNWLRKCWYK SKNVILADEM GLGKTVSACA FLSSLYCEFK INLPCLVLVP LSTMPNWMAE FSSWAPHLNV VEYHGSARSR SIIRQYEWHA GDASQIGKTK
0801: RSYKFNVLLT TYEMVLVDAA YLRSVSWEVL IVDEGHRLKN SSSKLFSLLN SFSFQHRVLL TGTPLQNNIG EMYNLLNFLQ PTSFPSLSSF EEKFNDLTTA
0901: EKVEELKKLV APHMLRRLKK DAMQNIPPKI ERMVPVELTS IQAEYYRAML TKNYQVLRNI GKGGAHQSLL NIVMQLRKVC NHPYLIPGTE PESGSPEFLH
1001: EMRIKASAKL TLLHLMLKIL HKEGHRVLIF SQMTKLLDIL EDYLTLEFGP KTFERVDGSV SVAERQAAIV RFNQDKTRFV FLLSTRSCGL GINLATADTV
1101: IIYDSDFNPH ADIQAMNRAH RIGQSNRLLV YRLVVRASVE ERILQLAKKK LMLDQLFVNK SESQKEVEDI IRWGTEELFG NSDSVDGKDN SEVPGPVADV
1201: EFKHRRKTGG LGDVYEDKCI GGSTKLVWDE NAILKLLDRS NLPSSMAEST DGDLDNDMLG TVKSIDWNDE LNDDPGTNED TAPIDNDGSE QASESKQGAT
1301: NRSEENEWDK LLRVRWEQYQ IEEEACLGRG KRLRKAVSYR ETFATLPNEA LSEDSDEGDE PKREYTAAGL ALKEKYGKLR ARQKERIAQR HIIKNYADDN
1401: LEEFMTPYDS IANEPAENPL VIVEDLNSSQ LSGAKRFSDS TGEMRQSSKK SKRYSEIPQD LYAKIPGNTA SFKHHSKATD VFNPGTPNHL LPVLGLCAPN
1501: ADQVNSYKNS ICAPSIKERK RASGDIVKQL STPADHSNVH RNEAQSASDK AIFPGASEEA LRRISNMIPD SYFPFSHIPP ISGKGVDPVE NPGPSIASFQ
1601: GNLGLPNFSL EDNAPLKHIK PIPDIFPSLS LGAHKDYIRS SVPELPDGSL LPNFMADITG TSKQKSFMSG LLPGLGLSPG QPIHSAMPDN HKKVLDNIMM
1701: RAQYASNKFL KKRSKLDYWS EDELDALWIG VRRHGRGNWD AMLRDPKLKF LNNRTSEELA LRWILEEQKI IDEPMSTSTR RSNSAAFPGI SDAMMSRALN
1801: ESNFSKMRME QPKLQSHLTD IQLGSSDILS TFPHVDAASY INSGEGGPSQ IPWQDFKHRS SYAGDFPAGA FDKLEKPDVG PIPPFMPNPF MTDSIGSLPI
1901: NRKNNSSIPH SEIRSSSREN ILSGVSDGQI NLLHEMQRRR RVRSGKEPIE MNLNHIDHSN LQLDNTSDLG GLKPNKLPHW LQEAVRAPSS KPPERELPAT
2001: VSAIAQSVCL LLGEQEPSIP PFLIPGTPLS RPKDPRINSK KKLRKAQQSN SHVEHSKIGS GEGDCVTTPA PPSIEASPAL PVDCDDGEPS LNLKSASLSS
2101: SAGSKGLDEL PPTFKEANQT VDGSEAVAAK SDAPEIGCQV PGSSPLHDKG SESSGSPVKD TPDAGIRLPG SDNSVMAFSA LPLVDEAPGT SSRAADTPVP
2201: CDGNESKEDV PLDNAESTRK LEPNG
0001: MSSLVERLRI RSDRKPVYNL DDSDDDDFVP KKDRTFEQVE AIVRTDAKEN ACQACGESTN LVSCNTCTYA FHAKCLVPPL KDASVENWRC PECVSPLNEI
0101: DKILDCEMRP TKSSEQGSSD AEPKPIFVKQ YLVKWKGLSY LHCSWVPEKE FQKAYKSNHR LKTRVNNFHR QMESFNNSED DFVAIRPEWT TVDRILACRE
0201: EDGELEYLVK YKELSYDECY WESESDISTF QNEIQRFKDV NSRTRRSKDV DHKRNPRDFQ QFDHTPEFLK GLLHPYQLEG LNFLRFSWSK QTHVILADEM
0301: GLGKTIQSIA LLASLFEENL IPHLVIAPLS TLRNWEREFA TWAPQMNVVM YFGTAQARAV IREHEFYLSK DQKKIKKKKS GQISSESKQK RIKFDVLLTS
0401: YEMINLDSAV LKPIKWECMI VDEGHRLKNK DSKLFSSLTQ YSSNHRILLT GTPLQNNLDE LFMLMHFLDA GKFGSLEEFQ EEFKDINQEE QISRLHKMLA
0501: PHLLRRVKKD VMKDMPPKKE LILRVDLSSL QKEYYKAIFT RNYQVLTKKG GAQISLNNIM MELRKVCCHP YMLEGVEPVI HDANEAFKQL LESCGKLQLL
0601: DKMMVKLKEQ GHRVLIYTQF QHMLDLLEDY CTHKKWQYER IDGKVGGAER QIRIDRFNAK NSNKFCFLLS TRAGGLGINL ATADTVIIYD SDWNPHADLQ
0701: AMARAHRLGQ TNKVMIYRLI NRGTIEERMM QLTKKKMVLE HLVVGKLKTQ NINQEELDDI IRYGSKELFA SEDDEAGKSG KIHYDDAAID KLLDRDLVEA
0801: EEVSVDDEEE NGFLKAFKVA NFEYIDENEA AALEAQRVAA ESKSSAGNSD RASYWEELLK DKFELHQAEE LNALGKRKRS RKQLVSIEED DLAGLEDVSS
0901: DGDESYEAES TDGEAAGQGV QTGRRPYRRK GRDNLEPTPL MEGEGRSFRV LGFNQSQRAI FVQTLMRYGA GNFDWKEFVP RLKQKTFEEI NEYGILFLKH
1001: IAEEIDENSP TFSDGVPKEG LRIEDVLVRI ALLILVQEKV KFVEDHPGKP VFPSRILERF PGLRSGKIWK EEHDKIMIRA VLKHGYGRWQ AIVDDKELGI
1101: QELICKELNF PHISLSAAEQ AGLQGQNGSG GSNPGAQTNQ NPGSVITGNN NASADGAQVN SMFYYRDMQR RLVEFVKKRV LLLEKAMNYE YAEEYYGLGG
1201: SSSIPTEEPE AEPKIADTVG VSFIEVDDEM LDGLPKTDPI TSEEIMGAAV DNNQARVEIA QHYNQMCKLL DENARESVQA YVNNQPPSTK VNESFRALKS
1301: INGNINTILS ITSDQSKSHE DDTKPDLNNV EMKDTAEETK PLRGGVVDLN VVEGEENIAE ASGSVDVKME EAKEEEKPKN MVVD
0101: DKILDCEMRP TKSSEQGSSD AEPKPIFVKQ YLVKWKGLSY LHCSWVPEKE FQKAYKSNHR LKTRVNNFHR QMESFNNSED DFVAIRPEWT TVDRILACRE
0201: EDGELEYLVK YKELSYDECY WESESDISTF QNEIQRFKDV NSRTRRSKDV DHKRNPRDFQ QFDHTPEFLK GLLHPYQLEG LNFLRFSWSK QTHVILADEM
0301: GLGKTIQSIA LLASLFEENL IPHLVIAPLS TLRNWEREFA TWAPQMNVVM YFGTAQARAV IREHEFYLSK DQKKIKKKKS GQISSESKQK RIKFDVLLTS
0401: YEMINLDSAV LKPIKWECMI VDEGHRLKNK DSKLFSSLTQ YSSNHRILLT GTPLQNNLDE LFMLMHFLDA GKFGSLEEFQ EEFKDINQEE QISRLHKMLA
0501: PHLLRRVKKD VMKDMPPKKE LILRVDLSSL QKEYYKAIFT RNYQVLTKKG GAQISLNNIM MELRKVCCHP YMLEGVEPVI HDANEAFKQL LESCGKLQLL
0601: DKMMVKLKEQ GHRVLIYTQF QHMLDLLEDY CTHKKWQYER IDGKVGGAER QIRIDRFNAK NSNKFCFLLS TRAGGLGINL ATADTVIIYD SDWNPHADLQ
0701: AMARAHRLGQ TNKVMIYRLI NRGTIEERMM QLTKKKMVLE HLVVGKLKTQ NINQEELDDI IRYGSKELFA SEDDEAGKSG KIHYDDAAID KLLDRDLVEA
0801: EEVSVDDEEE NGFLKAFKVA NFEYIDENEA AALEAQRVAA ESKSSAGNSD RASYWEELLK DKFELHQAEE LNALGKRKRS RKQLVSIEED DLAGLEDVSS
0901: DGDESYEAES TDGEAAGQGV QTGRRPYRRK GRDNLEPTPL MEGEGRSFRV LGFNQSQRAI FVQTLMRYGA GNFDWKEFVP RLKQKTFEEI NEYGILFLKH
1001: IAEEIDENSP TFSDGVPKEG LRIEDVLVRI ALLILVQEKV KFVEDHPGKP VFPSRILERF PGLRSGKIWK EEHDKIMIRA VLKHGYGRWQ AIVDDKELGI
1101: QELICKELNF PHISLSAAEQ AGLQGQNGSG GSNPGAQTNQ NPGSVITGNN NASADGAQVN SMFYYRDMQR RLVEFVKKRV LLLEKAMNYE YAEEYYGLGG
1201: SSSIPTEEPE AEPKIADTVG VSFIEVDDEM LDGLPKTDPI TSEEIMGAAV DNNQARVEIA QHYNQMCKLL DENARESVQA YVNNQPPSTK VNESFRALKS
1301: INGNINTILS ITSDQSKSHE DDTKPDLNNV EMKDTAEETK PLRGGVVDLN VVEGEENIAE ASGSVDVKME EAKEEEKPKN MVVD
Arabidopsis Description
PKLchromatin remodeling factor CHD3 (PICKLE) [Source:TAIR;Acc:AT2G25170]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.