Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93549 | Sorghum | cytosol | 91.75 | 93.06 |
| Os03t0722400-01 | Rice | cytosol | 79.72 | 79.62 |
| Zm00001d007978_P003 | Maize | cytosol | 73.58 | 79.19 |
| TraesCS7A01G074600.1 | Wheat | cytosol | 69.93 | 78.96 |
| TraesCS7D01G069700.1 | Wheat | cytosol | 72.52 | 78.95 |
| TraesCS2A01G368200.1 | Wheat | cytosol | 72.52 | 78.95 |
| Os09t0442700-01 | Rice | cytosol | 77.95 | 78.22 |
| TraesCS2D01G365000.1 | Wheat | cytosol | 75.0 | 77.47 |
| TraesCS2B01G385300.1 | Wheat | cytosol | 74.65 | 77.29 |
| TraesCS4D01G053600.2 | Wheat | cytosol | 73.7 | 74.85 |
| TraesCS4A01G261000.1 | Wheat | cytosol | 73.82 | 74.7 |
| TraesCS4A01G372200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 72.41 | 70.41 |
| TraesCS4B01G053600.1 | Wheat | cytosol, plastid | 73.82 | 69.09 |
| PGSC0003DMT400040011 | Potato | cytosol | 60.85 | 68.44 |
| VIT_04s0023g01610.t01 | Wine grape | cytosol | 61.2 | 68.38 |
| GSMUA_Achr3P26090_001 | Banana | cytosol | 60.73 | 67.85 |
| PGSC0003DMT400038561 | Potato | cytosol | 59.55 | 66.45 |
| Solyc02g062780.2.1 | Tomato | cytosol | 60.02 | 66.02 |
| KRH76800 | Soybean | cytosol | 57.55 | 64.04 |
| KRH28662 | Soybean | cytosol | 57.43 | 63.83 |
| AT5G66750.1 | Thale cress | cytosol | 56.96 | 63.22 |
| CDX81370 | Canola | cytosol | 56.6 | 62.66 |
| Bra012099.1-P | Field mustard | cytosol | 56.96 | 62.65 |
| CDY53848 | Canola | cytosol | 56.96 | 62.65 |
| CDY57125 | Canola | cytosol | 56.49 | 62.53 |
| Solyc02g085390.2.1 | Tomato | cytosol | 59.79 | 62.52 |
| CDY30755 | Canola | cytosol | 56.84 | 62.27 |
| Bra037150.1-P | Field mustard | nucleus | 56.49 | 39.95 |
| Zm00001d040831_P021 | Maize | nucleus | 31.37 | 23.75 |
| Zm00001d006798_P002 | Maize | nucleus | 30.54 | 23.21 |
| Zm00001d024816_P007 | Maize | cytosol | 30.31 | 23.15 |
| Zm00001d009312_P028 | Maize | nucleus | 30.78 | 23.1 |
| Zm00001d002656_P002 | Maize | nucleus | 24.76 | 21.45 |
| Zm00001d048552_P005 | Maize | cytosol | 22.29 | 20.91 |
| Zm00001d045109_P008 | Maize | cytosol | 26.42 | 16.79 |
| Zm00001d015595_P001 | Maize | cytosol | 3.77 | 16.24 |
| Zm00001d029180_P002 | Maize | nucleus | 26.3 | 14.62 |
| Zm00001d022405_P051 | Maize | nucleus | 29.01 | 14.27 |
| Zm00001d047471_P002 | Maize | nucleus | 25.94 | 14.04 |
| Zm00001d007089_P003 | Maize | nucleus | 26.3 | 12.84 |
| Zm00001d051507_P007 | Maize | nucleus | 27.24 | 11.21 |
| Zm00001d017660_P021 | Maize | nucleus | 27.24 | 11.2 |
| Zm00001d014977_P002 | Maize | nucleus | 28.42 | 11.14 |
| Zm00001d006428_P002 | Maize | nucleus | 26.89 | 10.41 |
| Zm00001d021541_P002 | Maize | nucleus | 26.77 | 10.2 |
| Zm00001d037346_P007 | Maize | nucleus | 28.77 | 6.4 |
Protein Annotations
| EntrezGene:100273981 | MapMan:12.5.2.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A1D6L2P8 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | ProteinID:ONM08727.1 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF812 | SMART:SM00487 |
| SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0008437916 | EnsemblPlantsGene:Zm00001d033827 |
| EnsemblPlants:Zm00001d033827_P006 | EnsemblPlants:Zm00001d033827_T006 | SEG:seg | : | : | : |
Description
chromatin complex subunit A 106 chromatin complex subunit A 106
Coordinates
chr1:+:275021703..275027854
Molecular Weight (calculated)
95382.6 Da
IEP (calculated)
5.307
GRAVY (calculated)
-0.394
Length
848 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEGMVVAVP NGVKADGAAA TAAAAKADSP KSVLEDEVIL WPSGFMCSKI SESKNGNASL ATEPVKQGDE TSDDFVDAMM SLPVDHEIDS ADVPPAVEAV
101: KDEDQLLEPA KEEKFDDFLD AGLSIPIDLE AKNGDVSLIT EAMKKEEEQL EEARIKAEEE EEARKREEVA KLAFDPESRY SKLDELLTKT QLFSEFLLEK
201: MDKIADEVVE PQGEESPVEK KKRRGRKRKA NATPQYNDKK AKTAVAAMLT RSREDRLADD STLSEEERLK KEQANLVPLM TGGKLKSYQI KGVKWLISLW
301: QNGLNGILAD QMGLGKTIQT IGFLAHLKGK GMHGPYLIIA PLSTLSNWVN EISRFVPSVS SIIYHGDKVA RAEIRRKFMP KTAGPDFPII VTSYEIAMLD
401: ARFLAHYRWT YVVVDEGHRL KNSKCKLLRE MKRIPMANKL LLTGTPLQNN LAELWSLLNF ILPDIFSSNE EFESWFDFSA KGSEEPEESE EKRRVHVVSK
501: LHAILRPFLL RRMKEDVEQM LPRKKEIIIY ANMTEVQKRI QDHLVEKTFD VYLNDESDIV LRRPGIKTKL NSLFIQLRKN CAHPDLLEAA FGTTSLYPPV
601: NKLLEQCGKF QLLDRLLTSL LARKHKVLIF SQWTKVLDIL EYYLDSKGLG VCRIDGSVNL EERRRQIAEF NDLNSSLNVF ILSTRAGGLG INLTSADTCI
701: LYDSDWNPQM DQQAMDRCHR IGQTRPVHVY RLATSYSVEE RIIKKAFGKL KLEHVVIGKG QFEQERAKPN ALEEGELLAL LRDEQDEEDR MIQTDISDED
801: LLKLMDRSDL SGPPGAADAA PLIPLKGPGW EVVVPTKSGG GMLSSLTS
101: KDEDQLLEPA KEEKFDDFLD AGLSIPIDLE AKNGDVSLIT EAMKKEEEQL EEARIKAEEE EEARKREEVA KLAFDPESRY SKLDELLTKT QLFSEFLLEK
201: MDKIADEVVE PQGEESPVEK KKRRGRKRKA NATPQYNDKK AKTAVAAMLT RSREDRLADD STLSEEERLK KEQANLVPLM TGGKLKSYQI KGVKWLISLW
301: QNGLNGILAD QMGLGKTIQT IGFLAHLKGK GMHGPYLIIA PLSTLSNWVN EISRFVPSVS SIIYHGDKVA RAEIRRKFMP KTAGPDFPII VTSYEIAMLD
401: ARFLAHYRWT YVVVDEGHRL KNSKCKLLRE MKRIPMANKL LLTGTPLQNN LAELWSLLNF ILPDIFSSNE EFESWFDFSA KGSEEPEESE EKRRVHVVSK
501: LHAILRPFLL RRMKEDVEQM LPRKKEIIIY ANMTEVQKRI QDHLVEKTFD VYLNDESDIV LRRPGIKTKL NSLFIQLRKN CAHPDLLEAA FGTTSLYPPV
601: NKLLEQCGKF QLLDRLLTSL LARKHKVLIF SQWTKVLDIL EYYLDSKGLG VCRIDGSVNL EERRRQIAEF NDLNSSLNVF ILSTRAGGLG INLTSADTCI
701: LYDSDWNPQM DQQAMDRCHR IGQTRPVHVY RLATSYSVEE RIIKKAFGKL KLEHVVIGKG QFEQERAKPN ALEEGELLAL LRDEQDEEDR MIQTDISDED
801: LLKLMDRSDL SGPPGAADAA PLIPLKGPGW EVVVPTKSGG GMLSSLTS
0001: MARNSNSDEA FSSEEEEERV KDNEEEDEEE LEAVARSSGS DDDEVAAADE SPVSDGEAAP VEDDYEDEED EEKAEISKRE KARLKEMQKL KKQKIQEMLE
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE EGGDPLTTEE VEEKEGLLEE GFSTWSRRDF NTFLRACEKY GRNDIKSIAS EMEGKTEEEV ERYAKVFKER YKELNDYDRI
0901: IKNIERGEAR ISRKDEIMKA IGKKLDRYRN PWLELKIQYG QNKGKLYNEE CDRFMICMIH KLGYGNWDEL KAAFRTSSVF RFDWFVKSRT SQELARRCDT
1001: LIRLIEKENQ EFDERERQAR KEKKLAKSAT PSKRPLGRQA SESPSSTKKR KHLSMR
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE EGGDPLTTEE VEEKEGLLEE GFSTWSRRDF NTFLRACEKY GRNDIKSIAS EMEGKTEEEV ERYAKVFKER YKELNDYDRI
0901: IKNIERGEAR ISRKDEIMKA IGKKLDRYRN PWLELKIQYG QNKGKLYNEE CDRFMICMIH KLGYGNWDEL KAAFRTSSVF RFDWFVKSRT SQELARRCDT
1001: LIRLIEKENQ EFDERERQAR KEKKLAKSAT PSKRPLGRQA SESPSSTKKR KHLSMR
Arabidopsis Description
CHR11Chromatin-remodeling protein 11 [Source:UniProtKB/TrEMBL;Acc:F4JAV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.