Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G069700.1 | Wheat | cytosol | 96.54 | 93.07 |
| TraesCS4A01G372200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 97.2 | 83.72 |
| TraesCS2A01G368200.1 | Wheat | cytosol | 80.83 | 77.92 |
| TraesCS4A01G261000.1 | Wheat | cytosol | 85.62 | 76.73 |
| EER97913 | Sorghum | cytosol | 77.9 | 75.19 |
| Zm00001d007978_P003 | Maize | cytosol | 76.43 | 72.84 |
| EER93549 | Sorghum | cytosol | 79.23 | 71.17 |
| Os03t0722400-01 | Rice | cytosol | 80.03 | 70.79 |
| Os09t0442700-01 | Rice | cytosol | 79.36 | 70.53 |
| Zm00001d033827_P006 | Maize | cytosol | 78.96 | 69.93 |
| GSMUA_Achr3P26090_001 | Banana | cytosol | 65.65 | 64.95 |
| PGSC0003DMT400040011 | Potato | cytosol | 64.98 | 64.72 |
| VIT_04s0023g01610.t01 | Wine grape | cytosol | 65.25 | 64.56 |
| PGSC0003DMT400038561 | Potato | cytosol | 64.45 | 63.68 |
| CDX81370 | Canola | cytosol | 63.38 | 62.14 |
| Solyc02g062780.2.1 | Tomato | cytosol | 63.78 | 62.13 |
| Bra012099.1-P | Field mustard | cytosol | 63.52 | 61.87 |
| CDY57125 | Canola | cytosol | 62.98 | 61.75 |
| CDY53848 | Canola | cytosol | 63.38 | 61.74 |
| KRH76800 | Soybean | cytosol | 62.58 | 61.68 |
| KRH28662 | Soybean | cytosol | 62.58 | 61.6 |
| CDY30755 | Canola | cytosol | 63.38 | 61.5 |
| AT5G66750.1 | Thale cress | cytosol | 62.32 | 61.26 |
| Solyc02g085390.2.1 | Tomato | cytosol | 64.31 | 59.56 |
| Bra037150.1-P | Field mustard | nucleus | 62.98 | 39.45 |
| TraesCS1A01G087900.1 | Wheat | nucleus | 32.22 | 26.77 |
| TraesCS1A01G091100.1 | Wheat | nucleus | 35.29 | 23.96 |
| TraesCS3A01G069900.2 | Wheat | nucleus | 35.02 | 23.27 |
| TraesCS2A01G403300.2 | Wheat | cytosol, nucleus | 25.97 | 22.44 |
| TraesCS5A01G541400.1 | Wheat | cytosol | 24.5 | 20.86 |
| TraesCS3A01G408500.1 | Wheat | nucleus | 28.1 | 18.35 |
| TraesCS7A01G147100.2 | Wheat | nucleus | 28.89 | 15.97 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 29.16 | 14.64 |
| TraesCS2A01G128400.1 | Wheat | nucleus | 31.82 | 13.83 |
| TraesCS7A01G544700.1 | Wheat | nucleus | 29.56 | 10.3 |
| TraesCS6A01G034200.2 | Wheat | nucleus, plastid | 30.09 | 10.2 |
| TraesCS2A01G227900.1 | Wheat | nucleus | 28.1 | 9.4 |
| TraesCS7A01G203600.1 | Wheat | nucleus | 31.56 | 6.99 |
Protein Annotations
| MapMan:12.5.2.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF812 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS7A01G074600 | EnsemblPlants:TraesCS7A01G074600.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg |
Description
No Description!
Coordinates
chr7A:-:40360812..40366575
Molecular Weight (calculated)
85464.9 Da
IEP (calculated)
6.534
GRAVY (calculated)
-0.496
Length
751 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEAKDEGNA GDSKREATED QLLNSVREGE SDEFQDAVAG LVTEVMAKEE DELCQARLKA EEEEEARKRE ARKAFDPNER FSKLDELLTK TQLFSEFLLE
101: RMEQITDKAV EVKDEDEPVE EQKKGRGRKR KAKAKPKYND KKAKTAVAAM LTRSREDRTA DDSTLTEEER WEKEQANLVP LLTGGKLKSY QIKGIKWLIS
201: LWQNGLNGIL ADQMGLGKTI QTIGFLAHLK GNGMDGPYMV IAPLSTLSNW LNELSRFAPS LIGLIYHGDK VARAELRRKF MPKKVGPNFP IIITSFEMAM
301: FDAKLLANYQ WKYVVVDEGH RLKNTNCKLL RELRRIPMEN KLLLTGTPLQ NNLAELWSLL NFILPDIFSS HQEFESWFDF SGKGDGEQQE ETDENKRVLV
401: VSKLHAILRP FLLRRMKEDV EHMLPRKKEI IIYANMTEHQ KQIQNHLVER TFDNYLHENT DIVLRRPGIK TKLNNLLIQL RKNCGHPDLL DAAFDTSYFY
501: PPVEKLLEQC GKFQLLDRLL DALLKRNHKV LIFSQWTKVL DILDYYLDTK GLKVCRIDGN VKLEDRRKQI AEFNDLNSGL NVFILSTRAG GLGINLTSAD
601: TCILYDSDWN PQMDLQAMDR CHRIGQTKPV HVYRLATSNS VEGRIIKRAF GKLKLEHVVI GKGQFQQDAA KPNTLDEAEL LALLRDEQGE EDRMIQMDIS
701: DEDLLKVMDR SDLTGPAAAA SAAPLVPLKG PGWEVVLASK SGGGMLSALT S
101: RMEQITDKAV EVKDEDEPVE EQKKGRGRKR KAKAKPKYND KKAKTAVAAM LTRSREDRTA DDSTLTEEER WEKEQANLVP LLTGGKLKSY QIKGIKWLIS
201: LWQNGLNGIL ADQMGLGKTI QTIGFLAHLK GNGMDGPYMV IAPLSTLSNW LNELSRFAPS LIGLIYHGDK VARAELRRKF MPKKVGPNFP IIITSFEMAM
301: FDAKLLANYQ WKYVVVDEGH RLKNTNCKLL RELRRIPMEN KLLLTGTPLQ NNLAELWSLL NFILPDIFSS HQEFESWFDF SGKGDGEQQE ETDENKRVLV
401: VSKLHAILRP FLLRRMKEDV EHMLPRKKEI IIYANMTEHQ KQIQNHLVER TFDNYLHENT DIVLRRPGIK TKLNNLLIQL RKNCGHPDLL DAAFDTSYFY
501: PPVEKLLEQC GKFQLLDRLL DALLKRNHKV LIFSQWTKVL DILDYYLDTK GLKVCRIDGN VKLEDRRKQI AEFNDLNSGL NVFILSTRAG GLGINLTSAD
601: TCILYDSDWN PQMDLQAMDR CHRIGQTKPV HVYRLATSNS VEGRIIKRAF GKLKLEHVVI GKGQFQQDAA KPNTLDEAEL LALLRDEQGE EDRMIQMDIS
701: DEDLLKVMDR SDLTGPAAAA SAAPLVPLKG PGWEVVLASK SGGGMLSALT S
0001: MARNSNSDEA FSSEEEEERV KDNEEEDEEE LEAVARSSGS DDDEVAAADE SPVSDGEAAP VEDDYEDEED EEKAEISKRE KARLKEMQKL KKQKIQEMLE
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE GGDPLTTEEV EEKEGLLEEG FSTWSRRDFN TFLRACEKYG RNDIKSIASE MEGKTEEEVE RYAKVFKERY KELNDYDRII
0901: KNIERGEARI SRKDEIMKAI GKKLDRYRNP WLELKIQYGQ NKGKLYNEEC DRFMICMIHK LGYGNWDELK AAFRTSSVFR FDWFVKSRTS QELARRCDTL
1001: IRLIEKENQE FDERERQARK EKKLAKSATP SKRPLGRQAS ESPSSTKKRK HLSMR
0101: SQNASIDADM NNKGKGRLKY LLQQTELFAH FAKSDGSSSQ KKAKGRGRHA SKITEEEEDE EYLKEEEDGL TGSGNTRLLT QPSCIQGKMR DYQLAGLNWL
0201: IRLYENGING ILADEMGLGK TLQTISLLAY LHEYRGINGP HMVVAPKSTL GNWMNEIRRF CPVLRAVKFL GNPEERRHIR EDLLVAGKFD ICVTSFEMAI
0301: KEKTALRRFS WRYIIIDEAH RIKNENSLLS KTMRLFSTNY RLLITGTPLQ NNLHELWALL NFLLPEIFSS AETFDEWFQI SGENDQQEVV QQLHKVLRPF
0401: LLRRLKSDVE KGLPPKKETI LKVGMSQMQK QYYKALLQKD LEAVNAGGER KRLLNIAMQL RKCCNHPYLF QGAEPGPPYT TGDHLITNAG KMVLLDKLLP
0501: KLKERDSRVL IFSQMTRLLD ILEDYLMYRG YLYCRIDGNT GGDERDASIE AYNKPGSEKF VFLLSTRAGG LGINLATADV VILYDSDWNP QVDLQAQDRA
0601: HRIGQKKEVQ VFRFCTESAI EEKVIERAYK KLALDALVIQ QGRLAEQKTV NKDELLQMVR YGAEMVFSSK DSTITDEDID RIIAKGEEAT AELDAKMKKF
0701: TEDAIQFKMD DSADFYDFDD DNKDENKLDF KKIVSDNWND PPKRERKRNY SESEYFKQTL RQGAPAKPKE PRIPRMPQLH DFQFFNIQRL TELYEKEVRY
0801: LMQTHQKNQL KDTIDVEEPE GGDPLTTEEV EEKEGLLEEG FSTWSRRDFN TFLRACEKYG RNDIKSIASE MEGKTEEEVE RYAKVFKERY KELNDYDRII
0901: KNIERGEARI SRKDEIMKAI GKKLDRYRNP WLELKIQYGQ NKGKLYNEEC DRFMICMIHK LGYGNWDELK AAFRTSSVFR FDWFVKSRTS QELARRCDTL
1001: IRLIEKENQE FDERERQARK EKKLAKSATP SKRPLGRQAS ESPSSTKKRK HLSMR
Arabidopsis Description
CHR11Chromatin-remodeling protein 11 [Source:UniProtKB/TrEMBL;Acc:F4JAV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.