Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G150500.1 | Wheat | nucleus | 99.36 | 99.36 |
| TraesCS2D01G130900.1 | Wheat | nucleus | 99.25 | 99.25 |
| HORVU2Hr1G022450.1 | Barley | nucleus | 32.81 | 98.78 |
| Os07t0660200-01 | Rice | nucleus | 31.89 | 87.32 |
| KXG36860 | Sorghum | nucleus | 84.14 | 84.19 |
| Zm00001d022405_P051 | Maize | nucleus | 83.1 | 83.29 |
| Zm00001d007089_P003 | Maize | nucleus | 76.97 | 76.57 |
| GSMUA_Achr8P29610_001 | Banana | nucleus | 63.14 | 64.94 |
| VIT_06s0009g03750.t01 | Wine grape | nucleus | 59.78 | 58.59 |
| Solyc12g099910.1.1 | Tomato | nucleus | 57.75 | 58.47 |
| KRH14560 | Soybean | nucleus | 59.61 | 58.39 |
| KRH73568 | Soybean | nucleus | 32.58 | 57.8 |
| Bra037208.1-P | Field mustard | nucleus | 55.73 | 57.12 |
| CDY37209 | Canola | nucleus | 55.67 | 57.06 |
| AT2G13370.2 | Thale cress | nucleus | 56.77 | 56.9 |
| CDX81444 | Canola | nucleus | 55.67 | 56.82 |
| TraesCS1A01G091100.1 | Wheat | nucleus | 20.78 | 32.46 |
| TraesCS7A01G074600.1 | Wheat | cytosol | 13.83 | 31.82 |
| TraesCS2A01G368200.1 | Wheat | cytosol | 13.83 | 30.68 |
| TraesCS1A01G087900.1 | Wheat | nucleus | 15.74 | 30.09 |
| TraesCS3A01G069900.2 | Wheat | nucleus | 19.39 | 29.65 |
| TraesCS4A01G261000.1 | Wheat | cytosol | 14.12 | 29.12 |
| TraesCS4A01G372200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 14.0 | 27.75 |
| TraesCS5A01G541400.1 | Wheat | cytosol | 12.62 | 24.72 |
| TraesCS7A01G147100.2 | Wheat | nucleus | 18.92 | 24.06 |
| TraesCS3A01G408500.1 | Wheat | nucleus | 15.28 | 22.96 |
| TraesCS2A01G403300.2 | Wheat | cytosol, nucleus | 11.17 | 22.21 |
| TraesCS4A01G147000.1 | Wheat | nucleus | 14.18 | 16.38 |
| TraesCS2A01G227900.1 | Wheat | nucleus | 19.62 | 15.1 |
| TraesCS7A01G544700.1 | Wheat | nucleus | 16.72 | 13.4 |
| TraesCS6A01G034200.2 | Wheat | nucleus, plastid | 16.55 | 12.91 |
| TraesCS7A01G203600.1 | Wheat | nucleus | 18.87 | 9.62 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:12.4.1.1.2 | MapMan:15.3.4.5 | Gene3D:2.40.50.40 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 |
| InterPro:Chromo-like_dom_sf | InterPro:Chromo/chromo_shadow_dom | InterPro:Chromo_domain | ncoils:Coil | InterPro:DUF4208 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0009506 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR000953 | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFAM:PF00385 | PFAM:PF13907 | PFscan:PS50013 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF952 | SMART:SM00298 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM01176 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | SUPFAM:SSF54160 | EnsemblPlantsGene:TraesCS2A01G128400 |
| EnsemblPlants:TraesCS2A01G128400.1 | TIGR:cd00024 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg | : |
Description
No Description!
Coordinates
chr2A:+:76344128..76359515
Molecular Weight (calculated)
196602.0 Da
IEP (calculated)
5.443
GRAVY (calculated)
-0.865
Length
1728 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAFFSNSGSR ADSGGYNLNE KADDEGAYES VRDRDADLNS GQLNLNEKAD DAYHSEEEQY EAGQSGLNPS EIKSGQNAQR VGGPSGPWGT NFLKDCRSTE
0101: GEEPSNSDRG MEDGSAASSH DDMDGSGEDD ELNRGHGDVP ADEMLSDDYY EQDREEQSDS LNRRGMSHPS CSTSGVASKS VPSRQKKSTK GSAYDDDDDA
0201: YNDENDNDDD DDDDADEDDP DDVDFEPDSE TDKAAVKEKL VDSENSGEEE EDDELELSDD DDDFIDSRRQ SKRLKVGGTK TSQRKKLPMQ APRKRGVSFT
0301: DEEYSSGKDS DAPNSPDFSH RPKKPVRLHL KTVGHNDVFS NVNSHNESRT SGRRRTQRNI SYAESDSDDS EEKSTKQQKL LKEDQDEEDG ETIERVIWYQ
0401: PKGVAEDALR NGQSTQPTVM SMPLDFDQQW DDVEFYIKWK GQSYLHCQWK TLSELRSVSG FKKVLNYMKR VSEEQRYKRS LSREEVEVHD VGKEMELDLI
0501: KQYSQVERVF ADRATKVDGD VVVPEYLVKW QGLPYAESTW EKDTDIEFAQ EAIDEYRARE VATAILGKTV DFQRKKSKAS LRRLDDQPEW LKGGKLRDYQ
0601: LEGLNFLVNG WRNDTNVILA DEMGLGKTIQ SVSMLGFLHN AQEINGPFLV VVPLSTLSNW AKEFRKWLPD MNVVIYVGNR ASREMCQQHE FFTNKKGGRH
0701: VKFHTLITTY EVILKDKVVL SKIKWNYLMV DEAHRLKNSE ASLYIALLEF STKNKLLITG TPLQNSVEEL WALLHFLDPV KFNSKDTFVE RYKNLSSFNE
0801: TELANLHMEL RPHILRRVIK DVEKSLPPKI ERILRIEMSP LQKQYYKWIL ERNFQNLNKG VRGNQVSLLN VVVELKKCCN HPFLFESADH GYGGDSIGDR
0901: NKVERIVMSS GKLVLLDKLL LRLRETNHRV LIFSQMVRML DILSEYLSLR GFQFQRLDGS TRADLRHQAM EHFNAPGSDD FCFLLSTRAG GLGINLATAD
1001: TVIIFDSDWN PQNDLQAMSR AHRIGQQDTV NIYRFVTCKS VEEDILERAK KKMVLDHLVI QKLNAEGRLE KKETKKGGSM FDKNELSAIL RFGAEELFKE
1101: EKTDEETKRK LESMDIDEIL ERAEKVETKA AEGEEGNELL SAFKVANFSS GEDDASFWSR LIQPDPADMG QETLAPRAAR NKKSYVEDHQ LDKNSSRKRR
1201: AVDAQEKPRR RSSRTVDTMV SLPFIDGAVA QVRNWSYGNM PKKDASRFVR AVKKFGNPSQ IGLIVDDVGG AIAKAPCEAQ IELYESLIDG CQEAVKENTD
1301: IKGTVLDFFG VPVKAYELLA RVEELQCLAK RIARYKDPVR QYRIQSPYKK PQWSASCGWI ETDDARLLLG IHWYGYGNWE KIRLDAKLGL TTKIAPATLG
1401: ERETFLPRAP NLDNRASALL QKEYANLSGK SSKAKGGASQ KVNNENGGAR SFKGRQKDAK PQEDIKSNKD DIKKRKVVEE AEAREEGEIS ESEEQIKYRL
1501: EKEEKWLEWC SEALDEEQDI LKRLDRLQNT SLNLPKEKVL SRIRRYLQII GEKIGKVAAQ HVESYKQSRM TTRLWNYVAR FSNMSGEQLC DLYLKVCQDQ
1601: MEAGVGPSHG GNFAPAPNRG SSNQPHPPRN QRSTRSFQHT PEPLNNGENT GNSEAWKRRR RADQDNQFDT QTMYQPPPFM ANGNRSQESS SSAGILGWGP
1701: VEMRRYGTER SKRGVHPSRF PAGHGPLL
0101: GEEPSNSDRG MEDGSAASSH DDMDGSGEDD ELNRGHGDVP ADEMLSDDYY EQDREEQSDS LNRRGMSHPS CSTSGVASKS VPSRQKKSTK GSAYDDDDDA
0201: YNDENDNDDD DDDDADEDDP DDVDFEPDSE TDKAAVKEKL VDSENSGEEE EDDELELSDD DDDFIDSRRQ SKRLKVGGTK TSQRKKLPMQ APRKRGVSFT
0301: DEEYSSGKDS DAPNSPDFSH RPKKPVRLHL KTVGHNDVFS NVNSHNESRT SGRRRTQRNI SYAESDSDDS EEKSTKQQKL LKEDQDEEDG ETIERVIWYQ
0401: PKGVAEDALR NGQSTQPTVM SMPLDFDQQW DDVEFYIKWK GQSYLHCQWK TLSELRSVSG FKKVLNYMKR VSEEQRYKRS LSREEVEVHD VGKEMELDLI
0501: KQYSQVERVF ADRATKVDGD VVVPEYLVKW QGLPYAESTW EKDTDIEFAQ EAIDEYRARE VATAILGKTV DFQRKKSKAS LRRLDDQPEW LKGGKLRDYQ
0601: LEGLNFLVNG WRNDTNVILA DEMGLGKTIQ SVSMLGFLHN AQEINGPFLV VVPLSTLSNW AKEFRKWLPD MNVVIYVGNR ASREMCQQHE FFTNKKGGRH
0701: VKFHTLITTY EVILKDKVVL SKIKWNYLMV DEAHRLKNSE ASLYIALLEF STKNKLLITG TPLQNSVEEL WALLHFLDPV KFNSKDTFVE RYKNLSSFNE
0801: TELANLHMEL RPHILRRVIK DVEKSLPPKI ERILRIEMSP LQKQYYKWIL ERNFQNLNKG VRGNQVSLLN VVVELKKCCN HPFLFESADH GYGGDSIGDR
0901: NKVERIVMSS GKLVLLDKLL LRLRETNHRV LIFSQMVRML DILSEYLSLR GFQFQRLDGS TRADLRHQAM EHFNAPGSDD FCFLLSTRAG GLGINLATAD
1001: TVIIFDSDWN PQNDLQAMSR AHRIGQQDTV NIYRFVTCKS VEEDILERAK KKMVLDHLVI QKLNAEGRLE KKETKKGGSM FDKNELSAIL RFGAEELFKE
1101: EKTDEETKRK LESMDIDEIL ERAEKVETKA AEGEEGNELL SAFKVANFSS GEDDASFWSR LIQPDPADMG QETLAPRAAR NKKSYVEDHQ LDKNSSRKRR
1201: AVDAQEKPRR RSSRTVDTMV SLPFIDGAVA QVRNWSYGNM PKKDASRFVR AVKKFGNPSQ IGLIVDDVGG AIAKAPCEAQ IELYESLIDG CQEAVKENTD
1301: IKGTVLDFFG VPVKAYELLA RVEELQCLAK RIARYKDPVR QYRIQSPYKK PQWSASCGWI ETDDARLLLG IHWYGYGNWE KIRLDAKLGL TTKIAPATLG
1401: ERETFLPRAP NLDNRASALL QKEYANLSGK SSKAKGGASQ KVNNENGGAR SFKGRQKDAK PQEDIKSNKD DIKKRKVVEE AEAREEGEIS ESEEQIKYRL
1501: EKEEKWLEWC SEALDEEQDI LKRLDRLQNT SLNLPKEKVL SRIRRYLQII GEKIGKVAAQ HVESYKQSRM TTRLWNYVAR FSNMSGEQLC DLYLKVCQDQ
1601: MEAGVGPSHG GNFAPAPNRG SSNQPHPPRN QRSTRSFQHT PEPLNNGENT GNSEAWKRRR RADQDNQFDT QTMYQPPPFM ANGNRSQESS SSAGILGWGP
1701: VEMRRYGTER SKRGVHPSRF PAGHGPLL
0001: MAFFRNYSND TVSHNVLDEN EERQNAATFQ SSPLNEDVDG TYSERGFDMN MDVQYQSDPE PGCSIRQPNE TAVDNVADPV DSHYQSSTKR LGVTGRWGST
0101: FWKDCQPMGQ REGSDPAKDS QSGYKEAYHS EDNHSNDRSE KLDSENENDN ENEEEDNEMN KHQSGQADVP ADEMLSDEYY EQDEDNQSDH VHYKGYSNPT
0201: NSRSLPKAGS AVHSNSRTSR AIHKNIHYSD SNHDHNGDAD MDYEEEEDED DPEDADFEPY DAADDGGASK KHGQGWDVSD EDPESDEEID LSDYEDDYGT
0301: KKPKVRQQSK GFRKSSAGLE RKSFHVSSRQ KRKTSYQDDD SEEDSENDND EGFRSLARRG TTLRQNNGRS TNTIGQSSEV RSSTRSVRKV SYVESEDSED
0401: IDDGKNRKNQ KDDIEEEDAD VIEKVLWHQL KGMGEDVQTN NKSTVPVLVS QLFDTEPDWN EMEFLIKWKG QSHLHCQWKT LSDLQNLSGF KKVLNYTKKV
0501: TEEIRYRTAL SREEIEVNDV SKEMDLDIIK QNSQVERIIA DRISKDGLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQV AIDEYKAREV SIAVQGKMVE
0601: QQRTKGKASL RKLDEQPEWL IGGTLRDYQL EGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPGM
0701: NIIVYVGTRA SREVCQQYEF YNEKKVGRPI KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW
0801: ALLHFLDPGK FKNKDEFVEN YKNLSSFNES ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI
0901: VVELKKCCNH PFLFESADHG YGGDINDNSK LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH
1001: FNAPASDDFC FLLSTRAGGL GINLATADTV VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR
1101: ETKKGSNFDK NELSAILRFG AEELFKEDKN DEESKKRLLS MDIDEILERA EQVEEKHTDE TEHELLGAFK VANFCNAEDD GSFWSRWIKP DSVVTAEEAL
1201: APRAARNTKS YVDPSHPDRT SKRKKKGSEP PEHTERSQKR RKTEYFVPST PLLEGTSAQV RGWSYGNLPK RDAQRFYRTV MKFGNHNQMA CIAEEVGGVV
1301: EAAPEEAQVE LFDALIDGCK ESVETGNFEP KGPVLDFFGV PVKANELLKR VQGLQLLSKR ISRYNDPISQ FRVLSYLKPS NWSKGCGWNQ IDDARLLLGI
1401: LYHGFGNWEK IRLDESLGLT KKIAPVELQH HETFLPRAPN LKERATALLE MELAAAGGKN TNAKASRKNS KKVKDNLINQ FKAPARDRRG KSGPANVSLL
1501: STKDGPRKTQ KAEPLVKEEG EMSDDGEVYE QFKEQKWMEW CEDVLADEIK TLGRLQRLQT TSADLPKEKV LFKIRRYLEI LGRRIDAIVL EHEEDLYKQD
1601: RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ EKEEEEGVGP SHLNGSRNFQ RQQKFKTAGN SQGSQQVHKG IDTAKFEAWK RRRRTENDVQ TERPTITNSN
1701: SLGILGPGPL DRSHRARQTG FPPR
0101: FWKDCQPMGQ REGSDPAKDS QSGYKEAYHS EDNHSNDRSE KLDSENENDN ENEEEDNEMN KHQSGQADVP ADEMLSDEYY EQDEDNQSDH VHYKGYSNPT
0201: NSRSLPKAGS AVHSNSRTSR AIHKNIHYSD SNHDHNGDAD MDYEEEEDED DPEDADFEPY DAADDGGASK KHGQGWDVSD EDPESDEEID LSDYEDDYGT
0301: KKPKVRQQSK GFRKSSAGLE RKSFHVSSRQ KRKTSYQDDD SEEDSENDND EGFRSLARRG TTLRQNNGRS TNTIGQSSEV RSSTRSVRKV SYVESEDSED
0401: IDDGKNRKNQ KDDIEEEDAD VIEKVLWHQL KGMGEDVQTN NKSTVPVLVS QLFDTEPDWN EMEFLIKWKG QSHLHCQWKT LSDLQNLSGF KKVLNYTKKV
0501: TEEIRYRTAL SREEIEVNDV SKEMDLDIIK QNSQVERIIA DRISKDGLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQV AIDEYKAREV SIAVQGKMVE
0601: QQRTKGKASL RKLDEQPEWL IGGTLRDYQL EGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPGM
0701: NIIVYVGTRA SREVCQQYEF YNEKKVGRPI KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW
0801: ALLHFLDPGK FKNKDEFVEN YKNLSSFNES ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI
0901: VVELKKCCNH PFLFESADHG YGGDINDNSK LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH
1001: FNAPASDDFC FLLSTRAGGL GINLATADTV VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR
1101: ETKKGSNFDK NELSAILRFG AEELFKEDKN DEESKKRLLS MDIDEILERA EQVEEKHTDE TEHELLGAFK VANFCNAEDD GSFWSRWIKP DSVVTAEEAL
1201: APRAARNTKS YVDPSHPDRT SKRKKKGSEP PEHTERSQKR RKTEYFVPST PLLEGTSAQV RGWSYGNLPK RDAQRFYRTV MKFGNHNQMA CIAEEVGGVV
1301: EAAPEEAQVE LFDALIDGCK ESVETGNFEP KGPVLDFFGV PVKANELLKR VQGLQLLSKR ISRYNDPISQ FRVLSYLKPS NWSKGCGWNQ IDDARLLLGI
1401: LYHGFGNWEK IRLDESLGLT KKIAPVELQH HETFLPRAPN LKERATALLE MELAAAGGKN TNAKASRKNS KKVKDNLINQ FKAPARDRRG KSGPANVSLL
1501: STKDGPRKTQ KAEPLVKEEG EMSDDGEVYE QFKEQKWMEW CEDVLADEIK TLGRLQRLQT TSADLPKEKV LFKIRRYLEI LGRRIDAIVL EHEEDLYKQD
1601: RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ EKEEEEGVGP SHLNGSRNFQ RQQKFKTAGN SQGSQQVHKG IDTAKFEAWK RRRRTENDVQ TERPTITNSN
1701: SLGILGPGPL DRSHRARQTG FPPR
Arabidopsis Description
CHR5Protein CHROMATIN REMODELING 5 [Source:UniProtKB/Swiss-Prot;Acc:F4IV99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.