Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G022450.1 | Barley | nucleus | 30.98 | 93.21 |
| Zm00001d007089_P003 | Maize | nucleus | 89.75 | 89.23 |
| Os07t0660200-01 | Rice | nucleus | 32.08 | 87.8 |
| TraesCS2D01G130900.1 | Wheat | nucleus | 84.25 | 84.2 |
| TraesCS2B01G150500.1 | Wheat | nucleus | 84.25 | 84.2 |
| TraesCS2A01G128400.1 | Wheat | nucleus | 84.19 | 84.14 |
| GSMUA_Achr8P29610_001 | Banana | nucleus | 64.62 | 66.43 |
| VIT_06s0009g03750.t01 | Wine grape | nucleus | 60.63 | 59.39 |
| Solyc12g099910.1.1 | Tomato | nucleus | 58.14 | 58.82 |
| KRH14560 | Soybean | nucleus | 59.58 | 58.33 |
| KRH73568 | Soybean | nucleus | 32.89 | 58.32 |
| Bra037208.1-P | Field mustard | nucleus | 55.82 | 57.18 |
| CDY37209 | Canola | nucleus | 55.76 | 57.12 |
| AT2G13370.2 | Thale cress | nucleus | 56.8 | 56.9 |
| CDX81444 | Canola | nucleus | 55.7 | 56.82 |
| KXG32501 | Sorghum | nucleus | 20.73 | 32.34 |
| EER97913 | Sorghum | cytosol | 14.13 | 31.36 |
| EER93549 | Sorghum | cytosol | 14.07 | 29.07 |
| EES19009 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 16.79 | 25.73 |
| OQU93492 | Sorghum | cytosol | 13.14 | 25.03 |
| KXG19483 | Sorghum | cytosol | 18.65 | 24.32 |
| KXG33813 | Sorghum | nucleus | 15.46 | 23.18 |
| KXG26914 | Sorghum | nucleus | 11.99 | 21.32 |
| OQU92590 | Sorghum | nucleus | 14.3 | 17.58 |
| KXG36264 | Sorghum | nucleus | 20.15 | 15.65 |
| OQU85588 | Sorghum | nucleus | 17.49 | 14.9 |
| OQU84199 | Sorghum | nucleus | 16.56 | 13.48 |
| OQU76185 | Sorghum | nucleus | 18.76 | 8.01 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:12.4.1.1.2 | MapMan:15.3.4.5 | Gene3D:2.40.50.40 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 |
| UniProt:A0A1B6QG41 | InterPro:Chromo-like_dom_sf | InterPro:Chromo/chromo_shadow_dom | InterPro:Chromo_domain | InterPro:DUF4208 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006338 | GO:GO:0008150 | GO:GO:0009506 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016818 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR000953 | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | EnsemblPlants:KXG36860 | ProteinID:KXG36860 |
| ProteinID:KXG36860.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF00385 | PFAM:PF09111 |
| PFAM:PF13907 | PFscan:PS50013 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF952 |
| InterPro:SLIDE | SMART:SM00298 | SMART:SM00487 | SMART:SM00490 | SMART:SM01176 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | EnsemblPlantsGene:SORBI_3002G404700 | SUPFAM:SSF52540 | SUPFAM:SSF54160 | UniParc:UPI00081AC7FF | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:-:75441736..75457490
Molecular Weight (calculated)
196491.0 Da
IEP (calculated)
5.655
GRAVY (calculated)
-0.866
Length
1727 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAFFSNSGSK ADSGGYNLNE KADDDGIYES DRDGNVDLNS RQWNLNEKAD DAYHSEAEQY EAGKSGLYSS ENASGQHAQR GGRSSGGPWG TNFLKDSRSK
0101: QTAREVPSNS GRGMDAASSH DDMDGSGEDD ELDRANGEVP AEEMLSDDYY EQDGEEQIES LHRGGTKQSS CSTSGGAAKS GSRQMKKTSK YNAYDDDDDD
0201: DEYNDENDDD NDADEDDPAD VDFEPDSETD KPTDKDKFMD SENSDGDDDD DLELSDDEDD DFVENRRQPK RLKIVATKTS KGRKLPMPAQ RKRGVSHSDE
0301: EYSSGKDSDV PSDSDFKHRS KKPDRLHQKP VGRSDVAPIN SHNELRTSGR RRTVKKISYA ESEESDDSEE KSTKQQKLMK EEPEEEDGET IEKVLWHQPK
0401: GVAEEAIRNH QSAQPTVVSL TSNFDQQWDE LEFYIKWKGQ SYLHCQWKTL SELQNVSGFK KVINYTKRVA EEQRYKRALS REEVEVHDVG KEMELDLIKQ
0501: YSQVERIFAD RVKADGDDLV PEYLVKWQGL PYAESTWEKD TDIDFAQDAI DEYKAREAAS AILGKTVDFQ RKKSKASLRR LDDQPEWLKA GKLRDYQLEG
0601: LNFLVNGWRN DTNVILADEM GLGKTIQSVS MLGFLHNAQE INGPFLVVVP LSTLSNWAKE FRKWLPNMNV VIYVGNRASR EMCQQHEFFS DKKGGRHVKF
0701: HTLITTYEVI LKDKAVLSKI KWNYLMVDEA HRLKNCEASL YTTLLEFSTK NKLLITGTPL QNSVEELWAL LHFLDPVKFN SKDSFVERYK NLSSFNETEL
0801: ANLHKELRPH ILRRVIKDVE KSLPPKIERI LRVEMSPLQK QYYKWILERN FQNLNKGVRG NQVSLLNIVV ELKKCCNHPF LFESADHGYG GDSIGDRNKV
0901: ERIVMSSGKL VLLDKLLVRL RETNHRVLIF SQMVKMLDIL AEYLSLRGFQ FQRLDGSTRA DLRHQAMEHF NAPGSDDFCF LLSTRAGGLG INLATADTVI
1001: IFDSDWNPQN DLQAMSRAHR IGQQETVNIY RFVTCKSVEE DILERAKKKM VLDHLVIQKL NAEGRLEKKE SKKGGSIFDK NELSAILRFG AEELFKEDKT
1101: DEETKRNLES LDIDEILERA EKVETKGGEG EEGNELLSAF KVANFSSGED DATFWSRLIQ PDPADMIQET LAPRAARNKK SYVEDPQLDK SNNRKRRAVE
1201: AQEKPRRRSG RTVETVNSLP LVDGAVAQVR EWSFGNVPKK DASRFVRAVK KFGNATQIGL IVDDVGGVLA KASHEAQIEL FDLLIDGCQE AVKENTDIKG
1301: TVLDFFGVAV KAYELLARVE ELQFLAKRIA RYKDPIKQYR IQLPYKKPQW SASCGWTETD DARLMVGIHW YGYGNWEKIR LDPKLGLAAK IAPATLGERE
1401: TFLPRAPNLD NRASALLQKE YAKFSGKSSK VKGNARQTVN NDSNSGARSM RGRQKDVPEK EDNKPNKDDI QKRKVIVEAE AREEGEISES EAETKYRLDK
1501: EEKWLEWCSE VLDEEQDTLK RLDRLQNTSV NLPKEKVLSR IRKYLLIIGD KIGEVVRQHS ESYRQSRMTM RLWNYVATFS NMSGEQLHDL YLKLSQDQLE
1601: GGVGPSHGGN FASVPPNKGG NSNQLHPSRN QRPSRSLQYN SESFHNNESS GSSEAWKRRR RADLDNQFDT QPLYQPPVMT NGNRLQESSS SAGILGWGPV
1701: EMRRYGNERP KRGVHPSHFS TGHGPLL
0101: QTAREVPSNS GRGMDAASSH DDMDGSGEDD ELDRANGEVP AEEMLSDDYY EQDGEEQIES LHRGGTKQSS CSTSGGAAKS GSRQMKKTSK YNAYDDDDDD
0201: DEYNDENDDD NDADEDDPAD VDFEPDSETD KPTDKDKFMD SENSDGDDDD DLELSDDEDD DFVENRRQPK RLKIVATKTS KGRKLPMPAQ RKRGVSHSDE
0301: EYSSGKDSDV PSDSDFKHRS KKPDRLHQKP VGRSDVAPIN SHNELRTSGR RRTVKKISYA ESEESDDSEE KSTKQQKLMK EEPEEEDGET IEKVLWHQPK
0401: GVAEEAIRNH QSAQPTVVSL TSNFDQQWDE LEFYIKWKGQ SYLHCQWKTL SELQNVSGFK KVINYTKRVA EEQRYKRALS REEVEVHDVG KEMELDLIKQ
0501: YSQVERIFAD RVKADGDDLV PEYLVKWQGL PYAESTWEKD TDIDFAQDAI DEYKAREAAS AILGKTVDFQ RKKSKASLRR LDDQPEWLKA GKLRDYQLEG
0601: LNFLVNGWRN DTNVILADEM GLGKTIQSVS MLGFLHNAQE INGPFLVVVP LSTLSNWAKE FRKWLPNMNV VIYVGNRASR EMCQQHEFFS DKKGGRHVKF
0701: HTLITTYEVI LKDKAVLSKI KWNYLMVDEA HRLKNCEASL YTTLLEFSTK NKLLITGTPL QNSVEELWAL LHFLDPVKFN SKDSFVERYK NLSSFNETEL
0801: ANLHKELRPH ILRRVIKDVE KSLPPKIERI LRVEMSPLQK QYYKWILERN FQNLNKGVRG NQVSLLNIVV ELKKCCNHPF LFESADHGYG GDSIGDRNKV
0901: ERIVMSSGKL VLLDKLLVRL RETNHRVLIF SQMVKMLDIL AEYLSLRGFQ FQRLDGSTRA DLRHQAMEHF NAPGSDDFCF LLSTRAGGLG INLATADTVI
1001: IFDSDWNPQN DLQAMSRAHR IGQQETVNIY RFVTCKSVEE DILERAKKKM VLDHLVIQKL NAEGRLEKKE SKKGGSIFDK NELSAILRFG AEELFKEDKT
1101: DEETKRNLES LDIDEILERA EKVETKGGEG EEGNELLSAF KVANFSSGED DATFWSRLIQ PDPADMIQET LAPRAARNKK SYVEDPQLDK SNNRKRRAVE
1201: AQEKPRRRSG RTVETVNSLP LVDGAVAQVR EWSFGNVPKK DASRFVRAVK KFGNATQIGL IVDDVGGVLA KASHEAQIEL FDLLIDGCQE AVKENTDIKG
1301: TVLDFFGVAV KAYELLARVE ELQFLAKRIA RYKDPIKQYR IQLPYKKPQW SASCGWTETD DARLMVGIHW YGYGNWEKIR LDPKLGLAAK IAPATLGERE
1401: TFLPRAPNLD NRASALLQKE YAKFSGKSSK VKGNARQTVN NDSNSGARSM RGRQKDVPEK EDNKPNKDDI QKRKVIVEAE AREEGEISES EAETKYRLDK
1501: EEKWLEWCSE VLDEEQDTLK RLDRLQNTSV NLPKEKVLSR IRKYLLIIGD KIGEVVRQHS ESYRQSRMTM RLWNYVATFS NMSGEQLHDL YLKLSQDQLE
1601: GGVGPSHGGN FASVPPNKGG NSNQLHPSRN QRPSRSLQYN SESFHNNESS GSSEAWKRRR RADLDNQFDT QPLYQPPVMT NGNRLQESSS SAGILGWGPV
1701: EMRRYGNERP KRGVHPSHFS TGHGPLL
0001: MAFFRNYSND TVSHNVLDEN EERQNAATFQ SSPLNEDVDG TYSERGFDMN MDVQYQSDPE PGCSIRQPNE TAVDNVADPV DSHYQSSTKR LGVTGRWGST
0101: FWKDCQPMGQ REGSDPAKDS QSGYKEAYHS EDNHSNDRSE KLDSENENDN ENEEEDNEMN KHQSGQADVP ADEMLSDEYY EQDEDNQSDH VHYKGYSNPT
0201: NSRSLPKAGS AVHSNSRTSR AIHKNIHYSD SNHDHNGDAD MDYEEEEDED DPEDADFEPY DAADDGGASK KHGQGWDVSD EDPESDEEID LSDYEDDYGT
0301: KKPKVRQQSK GFRKSSAGLE RKSFHVSSRQ KRKTSYQDDD SEEDSENDND EGFRSLARRG TTLRQNNGRS TNTIGQSSEV RSSTRSVRKV SYVESEDSED
0401: IDDGKNRKNQ KDDIEEEDAD VIEKVLWHQL KGMGEDVQTN NKSTVPVLVS QLFDTEPDWN EMEFLIKWKG QSHLHCQWKT LSDLQNLSGF KKVLNYTKKV
0501: TEEIRYRTAL SREEIEVNDV SKEMDLDIIK QNSQVERIIA DRISKDGLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQV AIDEYKAREV SIAVQGKMVE
0601: QQRTKGKASL RKLDEQPEWL IGGTLRDYQL EGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPGM
0701: NIIVYVGTRA SREVCQQYEF YNEKKVGRPI KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW
0801: ALLHFLDPGK FKNKDEFVEN YKNLSSFNES ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI
0901: VVELKKCCNH PFLFESADHG YGGDINDNSK LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH
1001: FNAPASDDFC FLLSTRAGGL GINLATADTV VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR
1101: ETKKGSNFDK NELSAILRFG AEELFKEDKN DEESKKRLLS MDIDEILERA EQVEEKHTDE TEHELLGAFK VANFCNAEDD GSFWSRWIKP DSVVTAEEAL
1201: APRAARNTKS YVDPSHPDRT SKRKKKGSEP PEHTERSQKR RKTEYFVPST PLLEGTSAQV RGWSYGNLPK RDAQRFYRTV MKFGNHNQMA CIAEEVGGVV
1301: EAAPEEAQVE LFDALIDGCK ESVETGNFEP KGPVLDFFGV PVKANELLKR VQGLQLLSKR ISRYNDPISQ FRVLSYLKPS NWSKGCGWNQ IDDARLLLGI
1401: LYHGFGNWEK IRLDESLGLT KKIAPVELQH HETFLPRAPN LKERATALLE MELAAAGGKN TNAKASRKNS KKVKDNLINQ FKAPARDRRG KSGPANVSLL
1501: STKDGPRKTQ KAEPLVKEEG EMSDDGEVYE QFKEQKWMEW CEDVLADEIK TLGRLQRLQT TSADLPKEKV LFKIRRYLEI LGRRIDAIVL EHEEDLYKQD
1601: RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ EKEEEEGVGP SHLNGSRNFQ RQQKFKTAGN SQGSQQVHKG IDTAKFEAWK RRRRTENDVQ TERPTITNSN
1701: SLGILGPGPL DRSHRARQTG FPPR
0101: FWKDCQPMGQ REGSDPAKDS QSGYKEAYHS EDNHSNDRSE KLDSENENDN ENEEEDNEMN KHQSGQADVP ADEMLSDEYY EQDEDNQSDH VHYKGYSNPT
0201: NSRSLPKAGS AVHSNSRTSR AIHKNIHYSD SNHDHNGDAD MDYEEEEDED DPEDADFEPY DAADDGGASK KHGQGWDVSD EDPESDEEID LSDYEDDYGT
0301: KKPKVRQQSK GFRKSSAGLE RKSFHVSSRQ KRKTSYQDDD SEEDSENDND EGFRSLARRG TTLRQNNGRS TNTIGQSSEV RSSTRSVRKV SYVESEDSED
0401: IDDGKNRKNQ KDDIEEEDAD VIEKVLWHQL KGMGEDVQTN NKSTVPVLVS QLFDTEPDWN EMEFLIKWKG QSHLHCQWKT LSDLQNLSGF KKVLNYTKKV
0501: TEEIRYRTAL SREEIEVNDV SKEMDLDIIK QNSQVERIIA DRISKDGLGD VVPEYLVKWQ GLSYAEATWE KDVDIAFAQV AIDEYKAREV SIAVQGKMVE
0601: QQRTKGKASL RKLDEQPEWL IGGTLRDYQL EGLNFLVNSW LNDTNVILAD EMGLGKTVQS VSMLGFLQNT QQIPGPFLVV VPLSTLANWA KEFRKWLPGM
0701: NIIVYVGTRA SREVCQQYEF YNEKKVGRPI KFNALLTTYE VVLKDKAVLS KIKWIYLMVD EAHRLKNSEA QLYTALLEFS TKNKLLITGT PLQNSVEELW
0801: ALLHFLDPGK FKNKDEFVEN YKNLSSFNES ELANLHLELR PHILRRVIKD VEKSLPPKIE RILRVEMSPL QKQYYKWILE RNFHDLNKGV RGNQVSLLNI
0901: VVELKKCCNH PFLFESADHG YGGDINDNSK LDKIILSSGK LVILDKLLVR LRETKHRVLI FSQMVRMLDI LAEYLSLRGF QFQRLDGSTK AELRQQAMDH
1001: FNAPASDDFC FLLSTRAGGL GINLATADTV VIFDSDWNPQ NDLQAMSRAH RIGQQEVVNI YRFVTSKSVE EEILERAKRK MVLDHLVIQK LNAEGRLEKR
1101: ETKKGSNFDK NELSAILRFG AEELFKEDKN DEESKKRLLS MDIDEILERA EQVEEKHTDE TEHELLGAFK VANFCNAEDD GSFWSRWIKP DSVVTAEEAL
1201: APRAARNTKS YVDPSHPDRT SKRKKKGSEP PEHTERSQKR RKTEYFVPST PLLEGTSAQV RGWSYGNLPK RDAQRFYRTV MKFGNHNQMA CIAEEVGGVV
1301: EAAPEEAQVE LFDALIDGCK ESVETGNFEP KGPVLDFFGV PVKANELLKR VQGLQLLSKR ISRYNDPISQ FRVLSYLKPS NWSKGCGWNQ IDDARLLLGI
1401: LYHGFGNWEK IRLDESLGLT KKIAPVELQH HETFLPRAPN LKERATALLE MELAAAGGKN TNAKASRKNS KKVKDNLINQ FKAPARDRRG KSGPANVSLL
1501: STKDGPRKTQ KAEPLVKEEG EMSDDGEVYE QFKEQKWMEW CEDVLADEIK TLGRLQRLQT TSADLPKEKV LFKIRRYLEI LGRRIDAIVL EHEEDLYKQD
1601: RMTMRLWNYV STFSNLSGDR LNQIYSKLKQ EKEEEEGVGP SHLNGSRNFQ RQQKFKTAGN SQGSQQVHKG IDTAKFEAWK RRRRTENDVQ TERPTITNSN
1701: SLGILGPGPL DRSHRARQTG FPPR
Arabidopsis Description
CHR5Protein CHROMATIN REMODELING 5 [Source:UniProtKB/Swiss-Prot;Acc:F4IV99]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.