Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051507_P007 | Maize | nucleus | 92.11 | 90.59 |
| Zm00001d017660_P021 | Maize | nucleus | 92.06 | 90.49 |
| Os02t0689800-01 | Rice | nucleus | 41.84 | 79.55 |
| TraesCS7D01G531100.1 | Wheat | nucleus | 77.45 | 72.32 |
| TraesCS7A01G544700.1 | Wheat | nucleus | 76.67 | 72.08 |
| TraesCS7B01G468100.1 | Wheat | nucleus | 77.16 | 72.04 |
| Solyc03g063220.1.1 | Tomato | nucleus | 48.1 | 60.63 |
| VIT_08s0007g06370.t01 | Wine grape | nucleus | 59.1 | 58.38 |
| KRH71872 | Soybean | nucleus | 57.28 | 56.88 |
| KRH38118 | Soybean | nucleus | 56.88 | 56.27 |
| CDY08401 | Canola | nucleus | 54.12 | 54.71 |
| AT3G12810.1 | Thale cress | nucleus | 55.35 | 54.6 |
| GSMUA_Achr3P26510_001 | Banana | nucleus | 43.76 | 54.52 |
| CDY52874 | Canola | nucleus | 54.12 | 54.39 |
| Bra034727.1-P | Field mustard | nucleus | 54.02 | 54.23 |
| EER97913 | Sorghum | cytosol | 11.15 | 29.05 |
| EER93549 | Sorghum | cytosol | 11.45 | 27.75 |
| KXG32501 | Sorghum | nucleus | 13.86 | 25.38 |
| OQU93492 | Sorghum | cytosol | 10.8 | 24.15 |
| EES19009 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 13.17 | 23.69 |
| KXG26914 | Sorghum | nucleus | 10.8 | 22.55 |
| OQU92590 | Sorghum | nucleus | 15.49 | 22.35 |
| KXG19483 | Sorghum | cytosol | 13.22 | 20.24 |
| KXG33813 | Sorghum | nucleus | 11.49 | 20.23 |
| KXG36860 | Sorghum | nucleus | 14.9 | 17.49 |
| KXG36264 | Sorghum | nucleus | 14.65 | 13.35 |
| OQU84199 | Sorghum | nucleus | 13.91 | 13.3 |
| OQU76185 | Sorghum | nucleus | 15.34 | 7.68 |
Protein Annotations
| MapMan:12.4.4.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A1Z5RQ59 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0030312 | GO:GO:0042742 |
| GO:GO:0046686 | InterPro:HSA_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR014012 | InterPro:IPR038718 | ProteinID:OQU85583.1 | ProteinID:OQU85585.1 | EnsemblPlants:OQU85588 | ProteinID:OQU85588 |
| ProteinID:OQU85588.1 | ProteinID:OQU85589.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF07529 |
| PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51204 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF935 | SMART:SM00487 |
| SMART:SM00490 | SMART:SM00573 | InterPro:SNF2-like_sf | InterPro:SNF2_N | EnsemblPlantsGene:SORBI_3004G276400 | SUPFAM:SSF52540 |
| UniParc:UPI000B424897 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:61970769..61989944
Molecular Weight (calculated)
231826.0 Da
IEP (calculated)
5.078
GRAVY (calculated)
-0.653
Length
2027 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASKGPRSKL DHETRARRQK ALEAPREPRR PKVHWDHVLA EMVWLAKEFD SERKWKLSMA KKIAQRANKS IVDQATKGER KQKEEEHRMR KVALNISKDV
0101: KKFWIKIEKL VVYKHQLEVE ERKKKALDKQ LDFLLGQTER YSTMLAENLV DMPYSQNLEN GTSKINQPSH QEEVAEENIN AAIPDDLDNM EVDDDYESSL
0201: DEEPEDDEHT IDEDEAQITE AERNEELAAL EAEADLPLDV ILKMYTKTKV SRESSPDSKD ILSNLGSKNL IVDSSNQANG CDHEPAHSSS DDGNSSEEVD
0301: DGHSYAEFVK KSHGKSNGNI SSINDQEDED YVAAEEVKDD ETTLSEEEEL AKKEDPDHLE EIKLLQKESE IPLEELIARY RKDGCADHET AELENSPHFV
0401: EEVNTDMSLD DQSVNILEAK SDISVDHLSR DVLETEHMAL QSEIDVLETE HKALQSEITS VQCAEQNFVE ENNLTDVNTV NGDKSDDVIA DAAAAARSAQ
0501: PTGNTFLTTK VRTKFPFLLK HSLREYQHIG LDWLVAMYEK RLNGILADEM GLGKTIMTIS LLAHLACEKG IWGPHLIVVP TSVMLNWETE FLKWCPAFKI
0601: LTYFGSAKER KQKRQGWMKP NYFHVCITTY RLVIQDSKVF KRKKWKYLIL DEAHLIKNWK SQRWQTLLNF NSKRRILLTG TPLQNDLMEL WSLMHFLMPH
0701: VFQSHQEFKD WFCNPISGMV EGQDKVNKEV IDRLHNVLRP FILRRLKRDV EKQLPKKHEH VIYCRLSRRQ RNLYEDFIAS SETQATLASG NYFGMISIIM
0801: QLRKVCNHPD LFEGRPIISS FDMAGVNMQL SYSVCMLLDK SPFSQVDLSD MNFVFTQNEF SMSSWEADEV ISAFPSSITS RDCDLDIFCS NKDHQGSNLT
0901: NIFEDIQKAL QEERIKESRE RAASIAWWNR VRCQKRPIYG TNMRQVLTVN HPVSNILDKR NNPLCHMDYS SSLADLVLPS VERFQKMLDI VESFTFAIPA
1001: ARAPPPVCWC SKGKSPVFID PAYREKCMNK FSPILSPIRS AIVRRQVYFP DRRLIQFDCG KLQELAILLR RLKSEGHRAL IFTQMTKMLD VLEEFINLYG
1101: YTYLRLDGST PPEERQTLMQ RFNTNPKFFL FILSTRSGGV GINLVGADTV IFYDSDWNPA MDQQAQDRCH RIGQTREVHI YRLISESTIE ENILKKANQK
1201: RALDDLVIQR GSYNTEFFKK LDPMEFFSGH MSLHAEDQEK NCSTTVEASN DVDLALSNAD VEAAIRQAED EADYMALKKL EEEEAVDNQE FSEEVAGRAE
1301: EDELVNEEDG KPDEHINEEH KYNSSDVEKE KHITLSTKRL NDEKALTLAV GDEDTDMLAD VKQMAAAAAA AGQASSSFEN QLRPIDRYAM RFMELWDPVI
1401: DKAAVNHQVN VEEEEWELDR IEKLKEDLEA EIDEDQEPLS YESWDVDFAT TAYRQHVEAL TQKQLLEEQE RQAQEAAKEL EEKNDNMSSH RRKSKKNKKK
1501: TGKFKSLKRV RLSSESEVLL EETSVDTMSI DDNAHSPELI SDESPHHYSN KRKKIMSATE EDSNSRSLKK FKKTTKSSFI SEALSPRLKD DLNDSDPKSV
1601: ARTKSDGRIS IPCMPVKRII VIKPERLKKK GIWSRDCASD SWTSEEDAVL CGTVHEYGPL WELASDFLHS LPGGSYRGRY HHPVHCCERY RELFCKHAIS
1701: ATDNSNSEKV PSGTGKAILR VSEDQAQMLV NVTSELPNNE LLLQKHFMAV ISSVWRSKCR RDPCCFTNTY SSTLHMFSPV KKPGGSSGNW PMVNFRPSFN
1801: LVRKALADAQ AKSTLMVIPP PSRNQEYRRN YLELELDFLK DQHAYEEGFP SVVNVSILEP EPSKQASEPV EQSLLSGVSC RQAENRLRLA SEACYDGESS
1901: HWASSAFHIN DATRYKSGSK SIGKHKAASE SGRPPKSKVQ KITESHQEGP IVMSNFLRMP AQILPSTADF HISDSLSEFG ISDSEFNYSE DLFQEVDDFE
2001: FFPDQGDSGL LPGIEELEPL SDFTDIG
0101: KKFWIKIEKL VVYKHQLEVE ERKKKALDKQ LDFLLGQTER YSTMLAENLV DMPYSQNLEN GTSKINQPSH QEEVAEENIN AAIPDDLDNM EVDDDYESSL
0201: DEEPEDDEHT IDEDEAQITE AERNEELAAL EAEADLPLDV ILKMYTKTKV SRESSPDSKD ILSNLGSKNL IVDSSNQANG CDHEPAHSSS DDGNSSEEVD
0301: DGHSYAEFVK KSHGKSNGNI SSINDQEDED YVAAEEVKDD ETTLSEEEEL AKKEDPDHLE EIKLLQKESE IPLEELIARY RKDGCADHET AELENSPHFV
0401: EEVNTDMSLD DQSVNILEAK SDISVDHLSR DVLETEHMAL QSEIDVLETE HKALQSEITS VQCAEQNFVE ENNLTDVNTV NGDKSDDVIA DAAAAARSAQ
0501: PTGNTFLTTK VRTKFPFLLK HSLREYQHIG LDWLVAMYEK RLNGILADEM GLGKTIMTIS LLAHLACEKG IWGPHLIVVP TSVMLNWETE FLKWCPAFKI
0601: LTYFGSAKER KQKRQGWMKP NYFHVCITTY RLVIQDSKVF KRKKWKYLIL DEAHLIKNWK SQRWQTLLNF NSKRRILLTG TPLQNDLMEL WSLMHFLMPH
0701: VFQSHQEFKD WFCNPISGMV EGQDKVNKEV IDRLHNVLRP FILRRLKRDV EKQLPKKHEH VIYCRLSRRQ RNLYEDFIAS SETQATLASG NYFGMISIIM
0801: QLRKVCNHPD LFEGRPIISS FDMAGVNMQL SYSVCMLLDK SPFSQVDLSD MNFVFTQNEF SMSSWEADEV ISAFPSSITS RDCDLDIFCS NKDHQGSNLT
0901: NIFEDIQKAL QEERIKESRE RAASIAWWNR VRCQKRPIYG TNMRQVLTVN HPVSNILDKR NNPLCHMDYS SSLADLVLPS VERFQKMLDI VESFTFAIPA
1001: ARAPPPVCWC SKGKSPVFID PAYREKCMNK FSPILSPIRS AIVRRQVYFP DRRLIQFDCG KLQELAILLR RLKSEGHRAL IFTQMTKMLD VLEEFINLYG
1101: YTYLRLDGST PPEERQTLMQ RFNTNPKFFL FILSTRSGGV GINLVGADTV IFYDSDWNPA MDQQAQDRCH RIGQTREVHI YRLISESTIE ENILKKANQK
1201: RALDDLVIQR GSYNTEFFKK LDPMEFFSGH MSLHAEDQEK NCSTTVEASN DVDLALSNAD VEAAIRQAED EADYMALKKL EEEEAVDNQE FSEEVAGRAE
1301: EDELVNEEDG KPDEHINEEH KYNSSDVEKE KHITLSTKRL NDEKALTLAV GDEDTDMLAD VKQMAAAAAA AGQASSSFEN QLRPIDRYAM RFMELWDPVI
1401: DKAAVNHQVN VEEEEWELDR IEKLKEDLEA EIDEDQEPLS YESWDVDFAT TAYRQHVEAL TQKQLLEEQE RQAQEAAKEL EEKNDNMSSH RRKSKKNKKK
1501: TGKFKSLKRV RLSSESEVLL EETSVDTMSI DDNAHSPELI SDESPHHYSN KRKKIMSATE EDSNSRSLKK FKKTTKSSFI SEALSPRLKD DLNDSDPKSV
1601: ARTKSDGRIS IPCMPVKRII VIKPERLKKK GIWSRDCASD SWTSEEDAVL CGTVHEYGPL WELASDFLHS LPGGSYRGRY HHPVHCCERY RELFCKHAIS
1701: ATDNSNSEKV PSGTGKAILR VSEDQAQMLV NVTSELPNNE LLLQKHFMAV ISSVWRSKCR RDPCCFTNTY SSTLHMFSPV KKPGGSSGNW PMVNFRPSFN
1801: LVRKALADAQ AKSTLMVIPP PSRNQEYRRN YLELELDFLK DQHAYEEGFP SVVNVSILEP EPSKQASEPV EQSLLSGVSC RQAENRLRLA SEACYDGESS
1901: HWASSAFHIN DATRYKSGSK SIGKHKAASE SGRPPKSKVQ KITESHQEGP IVMSNFLRMP AQILPSTADF HISDSLSEFG ISDSEFNYSE DLFQEVDDFE
2001: FFPDQGDSGL LPGIEELEPL SDFTDIG
0001: MASKGGKSKP DIVMASKSGK SKPDNESRAK RQKTLEAPKE PRRPKTHWDH VLEEMAWLSK DFESERKWKL AQAKKVALRA SKGMLDQASR EERKLKEEEQ
0101: RLRKVALNIS KDMKKFWMKV EKLVLYKHQL VRNEKKKKAM DKQLEFLLGQ TERYSTMLAE NLVEPYKQGQ NTPSKPLLTI ESKSDEERAE QIPPEINSSA
0201: GLESGSPELD EDYDLKSEDE TEDDEDTIEE DEKHFTKRER QEELEALQNE VDLPVEELLR RYTSGRVSRE TSPVKDENED NLTSVSRVTS PVKDENQDNL
0301: ASVGQDHGED KNNLAASEET EGNPSVRRSN DSYGHLAISE THSHDLEPGM TTASVKSRKE DHTYDFNDEQ EDVDFVLANG EEKDDEATLA VEEELAKADN
0401: EDHVEEIALL QKESEMPIEV LLARYKEDFG GKDISEDESE SSFAVSEDSI VDSDENRQQA DLDDDNVDLT ECKLDPEPCS ENVEGTFHEV AEDNDKDSSD
0501: KIADAAAAAR SAQPTGFTYS TTKVRTKLPF LLKHSLREYQ HIGLDWLVTM YEKKLNGILA DEMGLGKTIM TIALLAHLAC DKGIWGPHLI VVPTSVMLNW
0601: ETEFLKWCPA FKILTYFGSA KERKLKRQGW MKLNSFHVCI TTYRLVIQDS KMFKRKKWKY LILDEAHLIK NWKSQRWQTL LNFNSKRRIL LTGTPLQNDL
0701: MELWSLMHFL MPHVFQSHQE FKDWFCNPIA GMVEGQEKIN KEVIDRLHNV LRPFLLRRLK RDVEKQLPSK HEHVIFCRLS KRQRNLYEDF IASTETQATL
0801: TSGSFFGMIS IIMQLRKVCN HPDLFEGRPI VSSFDMAGID VQLSSTICSL LLESPFSKVD LEALGFLFTH LDFSMTSWEG DEIKAISTPS ELIKQRVNLK
0901: DDLEAIPLSP KNRKNLQGTN IFEEIRKAVF EERIQESKDR AAAIAWWNSL RCQRKPTYST SLRTLLTIKG PLDDLKANCS SYMYSSILAD IVLSPIERFQ
1001: KMIELVEAFT FAIPAARVPS PTCWCSKSDS PVFLSPSYKE KVTDLLSPLL SPIRPAIVRR QVYFPDRRLI QFDCGKLQEL AMLLRKLKFG GHRALIFTQM
1101: TKMLDVLEAF INLYGYTYMR LDGSTPPEER QTLMQRFNTN PKIFLFILST RSGGVGINLV GADTVIFYDS DWNPAMDQQA QDRCHRIGQT REVHIYRLIS
1201: ESTIEENILK KANQKRVLDN LVIQNGEYNT EFFKKLDPME LFSGHKALTT KDEKETSKHC GADIPLSNAD VEAALKQAED EADYMALKRV EQEEAVDNQE
1301: FTEEPVERPE DDELVNEDDI KADEPADQGL VAAGPAKEEM SLLHSDIRDE RAVITTSSQE DDTDVLDDVK QMAAAAADAG QAISSFENQL RPIDRYAIRF
1401: LELWDPIIVE AAMENEAGFE EKEWELDHIE KYKEEMEAEI DDGEEPLVYE KWDADFATEA YRQQVEVLAQ HQLMEDLENE AREREAAEVA EMVLTQNESA
1501: HVLKPKKKKK AKKAKYKSLK KGSLAAESKH VKSVVKIEDS TDDDNEEFGY VSSSDSDMVT PLSRMHMKGK KRDLIVDTDE EKTSKKKAKK HKKSLPNSDI
1601: KYKQTSALLD ELEPSKPSDS MVVDNELKLT NRGKTVGKKF ITSMPIKRVL MIKPEKLKKG NLWSRDCVPS PDSWLPQEDA ILCAMVHEYG PNWNFVSGTL
1701: YGMTAGGAYR GRYRHPAYCC ERYRELIQRH ILSASDSAVN EKNLNTGSGK ALLKVTEENI RTLLNVAAEQ PDTEMLLQKH FSCLLSSIWR TSTRTGNDQM
1801: LSLNSPIFNR QFMGSVNHTQ DLARKPWQGM KVTSLSRKLL ESALQDSGPS QPDNTISRSR LQETQPINKL GLELTLEFPR GNDDSLNQFP PMISLSIDGS
1901: DSLNYVNEPP GEDVLKGSRV AAENRYRNAA NACIEDSFGW ASNTFPANDL KSRTGTKAQS LGKHKLSASD SAKSTKSKHR KLLAEQLEGA WVRPNDPNLK
2001: FDFTPGDREE EEEQEVDEKA NSAEIEMISC SQWYDPFFTS GLDDCSLASD ISEIE
0101: RLRKVALNIS KDMKKFWMKV EKLVLYKHQL VRNEKKKKAM DKQLEFLLGQ TERYSTMLAE NLVEPYKQGQ NTPSKPLLTI ESKSDEERAE QIPPEINSSA
0201: GLESGSPELD EDYDLKSEDE TEDDEDTIEE DEKHFTKRER QEELEALQNE VDLPVEELLR RYTSGRVSRE TSPVKDENED NLTSVSRVTS PVKDENQDNL
0301: ASVGQDHGED KNNLAASEET EGNPSVRRSN DSYGHLAISE THSHDLEPGM TTASVKSRKE DHTYDFNDEQ EDVDFVLANG EEKDDEATLA VEEELAKADN
0401: EDHVEEIALL QKESEMPIEV LLARYKEDFG GKDISEDESE SSFAVSEDSI VDSDENRQQA DLDDDNVDLT ECKLDPEPCS ENVEGTFHEV AEDNDKDSSD
0501: KIADAAAAAR SAQPTGFTYS TTKVRTKLPF LLKHSLREYQ HIGLDWLVTM YEKKLNGILA DEMGLGKTIM TIALLAHLAC DKGIWGPHLI VVPTSVMLNW
0601: ETEFLKWCPA FKILTYFGSA KERKLKRQGW MKLNSFHVCI TTYRLVIQDS KMFKRKKWKY LILDEAHLIK NWKSQRWQTL LNFNSKRRIL LTGTPLQNDL
0701: MELWSLMHFL MPHVFQSHQE FKDWFCNPIA GMVEGQEKIN KEVIDRLHNV LRPFLLRRLK RDVEKQLPSK HEHVIFCRLS KRQRNLYEDF IASTETQATL
0801: TSGSFFGMIS IIMQLRKVCN HPDLFEGRPI VSSFDMAGID VQLSSTICSL LLESPFSKVD LEALGFLFTH LDFSMTSWEG DEIKAISTPS ELIKQRVNLK
0901: DDLEAIPLSP KNRKNLQGTN IFEEIRKAVF EERIQESKDR AAAIAWWNSL RCQRKPTYST SLRTLLTIKG PLDDLKANCS SYMYSSILAD IVLSPIERFQ
1001: KMIELVEAFT FAIPAARVPS PTCWCSKSDS PVFLSPSYKE KVTDLLSPLL SPIRPAIVRR QVYFPDRRLI QFDCGKLQEL AMLLRKLKFG GHRALIFTQM
1101: TKMLDVLEAF INLYGYTYMR LDGSTPPEER QTLMQRFNTN PKIFLFILST RSGGVGINLV GADTVIFYDS DWNPAMDQQA QDRCHRIGQT REVHIYRLIS
1201: ESTIEENILK KANQKRVLDN LVIQNGEYNT EFFKKLDPME LFSGHKALTT KDEKETSKHC GADIPLSNAD VEAALKQAED EADYMALKRV EQEEAVDNQE
1301: FTEEPVERPE DDELVNEDDI KADEPADQGL VAAGPAKEEM SLLHSDIRDE RAVITTSSQE DDTDVLDDVK QMAAAAADAG QAISSFENQL RPIDRYAIRF
1401: LELWDPIIVE AAMENEAGFE EKEWELDHIE KYKEEMEAEI DDGEEPLVYE KWDADFATEA YRQQVEVLAQ HQLMEDLENE AREREAAEVA EMVLTQNESA
1501: HVLKPKKKKK AKKAKYKSLK KGSLAAESKH VKSVVKIEDS TDDDNEEFGY VSSSDSDMVT PLSRMHMKGK KRDLIVDTDE EKTSKKKAKK HKKSLPNSDI
1601: KYKQTSALLD ELEPSKPSDS MVVDNELKLT NRGKTVGKKF ITSMPIKRVL MIKPEKLKKG NLWSRDCVPS PDSWLPQEDA ILCAMVHEYG PNWNFVSGTL
1701: YGMTAGGAYR GRYRHPAYCC ERYRELIQRH ILSASDSAVN EKNLNTGSGK ALLKVTEENI RTLLNVAAEQ PDTEMLLQKH FSCLLSSIWR TSTRTGNDQM
1801: LSLNSPIFNR QFMGSVNHTQ DLARKPWQGM KVTSLSRKLL ESALQDSGPS QPDNTISRSR LQETQPINKL GLELTLEFPR GNDDSLNQFP PMISLSIDGS
1901: DSLNYVNEPP GEDVLKGSRV AAENRYRNAA NACIEDSFGW ASNTFPANDL KSRTGTKAQS LGKHKLSASD SAKSTKSKHR KLLAEQLEGA WVRPNDPNLK
2001: FDFTPGDREE EEEQEVDEKA NSAEIEMISC SQWYDPFFTS GLDDCSLASD ISEIE
Arabidopsis Description
PIE1Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Source:UniProtKB/Swiss-Prot;Acc:Q7X9V2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.