Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040831_P021 | Maize | nucleus | 96.93 | 95.8 |
| Zm00001d009312_P028 | Maize | nucleus | 97.11 | 95.13 |
| Os01t0367900-01 | Rice | nucleus | 93.95 | 93.95 |
| CDY47176 | Canola | cytosol | 37.67 | 87.97 |
| KRH21031 | Soybean | nucleus | 81.66 | 84.72 |
| VIT_05s0020g01780.t01 | Wine grape | nucleus | 82.38 | 84.44 |
| KRH11241 | Soybean | nucleus | 81.75 | 84.42 |
| KRH50913 | Soybean | nucleus | 80.49 | 84.22 |
| PGSC0003DMT400079102 | Potato | nucleus | 79.86 | 83.55 |
| KRH02212 | Soybean | nucleus | 79.86 | 83.47 |
| GSMUA_Achr3P23910_001 | Banana | nucleus | 80.49 | 83.35 |
| Solyc06g054560.2.1 | Tomato | nucleus | 79.86 | 83.32 |
| CDY18857 | Canola | nucleus | 78.95 | 83.32 |
| Bra040221.1-P | Field mustard | nucleus | 78.86 | 83.22 |
| AT3G06400.3 | Thale cress | nucleus | 78.95 | 82.69 |
| PGSC0003DMT400058376 | Potato | nucleus | 78.95 | 82.14 |
| CDY24695 | Canola | nucleus | 77.87 | 81.86 |
| AT5G18620.2 | Thale cress | nucleus | 79.13 | 81.72 |
| Solyc01g067390.2.1 | Tomato | nucleus | 78.59 | 81.69 |
| Bra020751.1-P | Field mustard | nucleus | 77.6 | 81.58 |
| TraesCS3D01G068900.1 | Wheat | nucleus | 81.57 | 80.55 |
| TraesCS3B01G083400.1 | Wheat | nucleus | 82.48 | 80.51 |
| TraesCS3A01G069900.2 | Wheat | nucleus | 82.02 | 80.35 |
| CDX92595 | Canola | nucleus | 64.77 | 80.2 |
| CDY13907 | Canola | nucleus | 76.42 | 79.89 |
| Bra002173.1-P | Field mustard | nucleus | 76.51 | 79.61 |
| HORVU3Hr1G012850.1 | Barley | nucleus | 80.58 | 78.73 |
| CDY02609 | Canola | nucleus | 73.35 | 76.97 |
| CDY05261 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 78.14 | 76.35 |
| Bra023689.1-P | Field mustard | nucleus | 75.43 | 75.84 |
| EER97913 | Sorghum | cytosol | 23.22 | 33.03 |
| EER93549 | Sorghum | cytosol | 24.39 | 32.3 |
| OQU93492 | Sorghum | cytosol | 21.05 | 25.69 |
| EES19009 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 26.02 | 25.55 |
| KXG33813 | Sorghum | nucleus | 22.76 | 21.88 |
| KXG19483 | Sorghum | cytosol | 25.11 | 21.0 |
| KXG36860 | Sorghum | nucleus | 32.34 | 20.73 |
| KXG26914 | Sorghum | nucleus | 17.25 | 19.67 |
| OQU92590 | Sorghum | nucleus | 22.58 | 17.79 |
| OQU85588 | Sorghum | nucleus | 25.38 | 13.86 |
| OQU84199 | Sorghum | nucleus | 25.11 | 13.11 |
| KXG36264 | Sorghum | nucleus | 24.93 | 12.41 |
| OQU76185 | Sorghum | nucleus | 28.09 | 7.68 |
Protein Annotations
| Gene3D:1.10.10.60 | Gene3D:1.10.1040.30 | MapMan:12.4.1.1.4 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A1B6Q3J9 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 |
| GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006325 | GO:GO:0006338 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016569 | GO:GO:0016589 | GO:GO:0016787 | GO:GO:0016818 |
| GO:GO:0016887 | GO:GO:0031491 | GO:GO:0043044 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:Homeobox-like_sf |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR017884 | InterPro:IPR036306 | InterPro:IPR038718 | InterPro:ISWI |
| InterPro:ISWI_HAND-dom | InterPro:ISWI_HAND-dom_sf | EnsemblPlants:KXG32501 | ProteinID:KXG32501 | ProteinID:KXG32501.1 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFAM:PF09110 | PFAM:PF09111 | PFscan:PS51192 | PFscan:PS51194 |
| PFscan:PS51293 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF887 | InterPro:SANT/Myb | InterPro:SANT_dom | InterPro:SLIDE |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00717 | InterPro:SNF2-like_sf | InterPro:SNF2_N | EnsemblPlantsGene:SORBI_3003G163200 |
| SUPFAM:SSF101224 | SUPFAM:SSF46689 | SUPFAM:SSF52540 | UniParc:UPI00081AEA30 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:-:20367129..20375254
Molecular Weight (calculated)
128024.0 Da
IEP (calculated)
4.925
GRAVY (calculated)
-0.870
Length
1107 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAKPVKYDDE EEISSSAEEE EDQSDAAGSG SGEEGEDDEE DAAAAPAEEE EEEAEGEGQQ EEEVDEEEIE AVTTGAGAED EEDAGAPAAT EGDDESQSTE
0101: DDESVPRDKD DGDETDVVVG KREKARLKEL QKMKKQKIQE ILDTQNAAID ADMNNKGKGR LKYLLQQTEI FAHFAKGSQS NEKKPRGRGR HASKMTEEEE
0201: DEEYLKEEED ALAGAGGTRL VSQPSCIKGK MRDYQLAGLN WLIRLYENGI NGILADEMGL GKTLQTISLL GYLHEFRGIT GPHMVVAPKS TLGNWIKEIQ
0301: RFCPILRAVK FLGNPEERNH IRDNLLQPGK FDVCVTSFEM AIKEKSTLRR FSWRYIIIDE AHRIKNENSL LSKTMRIYNT NYRLLITGTP LQNNLHELWA
0401: LLNFLLPEIF SSAETFDEWF QISGENDQQE VVQQLHKVLR PFLLRRLKSD VEKGLPPKKE TILKVGMSQM QKQYYRALLQ KDLEVINAGG ERKRLLNIAM
0501: QLRKCCNHPY LFQGAEPGPP YTTGEHLVEN AGKMVLLDKL LPKLKERDSR VLIFSQMTRL LDILEDYLMY RGYQYCRIDG NTGGEDRDAS IEAFNRPGSE
0601: KFVFLLSTRA GGLGINLATA DVVVLYDSDW NPQADLQAQD RAHRIGQKKE VQVFRFCTEY TIEEKVIERA YKKLALDALV IQQGRLAEQK TVNKDDLLQM
0701: VRFGAEMVFS SKDSTITDED IDRIIAKGEE TTAELDAKMK KFTEDAIKFK MDDNAELYDF DDEKDENKVD FKKLVSDNWI EPPRRERKRN YSESEYFKQA
0801: LRQGAPAKPR EPRIPRMPHL HDFQFFNNQR LNELYEKEVR YLMQANQKKD TIDGEDEDQL EPLTAEEQEE KEQLLEEGFA SWTRRDFNTF IRACEKYGRN
0901: DIKSISSEME GKTEEEVQRY AKVFKERYKE LSDYDRIIKN IERGEARISR KDEIMKAIGK KLDRYKNPWL ELKIQYGQNK GKFYNEECDR FMLCMVHKLG
1001: YGNWDELKAA FRMSPLFRFD WFVKSRTTQE LARRCDTLIR LVEKENQEYD EQERQARKEK RLAKNMTPTK RAALRNSEGE NTPLSSFKRR RQSLMDDYVG
1101: SGRRKRG
0101: DDESVPRDKD DGDETDVVVG KREKARLKEL QKMKKQKIQE ILDTQNAAID ADMNNKGKGR LKYLLQQTEI FAHFAKGSQS NEKKPRGRGR HASKMTEEEE
0201: DEEYLKEEED ALAGAGGTRL VSQPSCIKGK MRDYQLAGLN WLIRLYENGI NGILADEMGL GKTLQTISLL GYLHEFRGIT GPHMVVAPKS TLGNWIKEIQ
0301: RFCPILRAVK FLGNPEERNH IRDNLLQPGK FDVCVTSFEM AIKEKSTLRR FSWRYIIIDE AHRIKNENSL LSKTMRIYNT NYRLLITGTP LQNNLHELWA
0401: LLNFLLPEIF SSAETFDEWF QISGENDQQE VVQQLHKVLR PFLLRRLKSD VEKGLPPKKE TILKVGMSQM QKQYYRALLQ KDLEVINAGG ERKRLLNIAM
0501: QLRKCCNHPY LFQGAEPGPP YTTGEHLVEN AGKMVLLDKL LPKLKERDSR VLIFSQMTRL LDILEDYLMY RGYQYCRIDG NTGGEDRDAS IEAFNRPGSE
0601: KFVFLLSTRA GGLGINLATA DVVVLYDSDW NPQADLQAQD RAHRIGQKKE VQVFRFCTEY TIEEKVIERA YKKLALDALV IQQGRLAEQK TVNKDDLLQM
0701: VRFGAEMVFS SKDSTITDED IDRIIAKGEE TTAELDAKMK KFTEDAIKFK MDDNAELYDF DDEKDENKVD FKKLVSDNWI EPPRRERKRN YSESEYFKQA
0801: LRQGAPAKPR EPRIPRMPHL HDFQFFNNQR LNELYEKEVR YLMQANQKKD TIDGEDEDQL EPLTAEEQEE KEQLLEEGFA SWTRRDFNTF IRACEKYGRN
0901: DIKSISSEME GKTEEEVQRY AKVFKERYKE LSDYDRIIKN IERGEARISR KDEIMKAIGK KLDRYKNPWL ELKIQYGQNK GKFYNEECDR FMLCMVHKLG
1001: YGNWDELKAA FRMSPLFRFD WFVKSRTTQE LARRCDTLIR LVEKENQEYD EQERQARKEK RLAKNMTPTK RAALRNSEGE NTPLSSFKRR RQSLMDDYVG
1101: SGRRKRG
0001: MARASKREVS SDEAYSSEEE EQVNDQANVE EDDDELEAVA RSAGSDEEDV APDEAPVSDD EVVPVEDDAE EDEEDEEKAE ISKREKARLK EMQKMKKQKI
0101: QQILDSQNAS IDADMNNKGK GRIKYLLQQT ELFAHFAKSD PSPSQKKGKG RGRHSSKLTE EEEDEECLKE EEGGIVGSGG TRLLTQPACI QGKLRDYQLA
0201: GLNWLIRLYE NGINGILADE MGLGKTLQTI SLLAYLHEYR GINGPHMVVA PKSTLGNWMN EIRRFCPVLR AVKFLGNPEE RRHIREELLV AGKFDICVTS
0301: FEMAIKEKTT LRRFSWRYII IDEAHRIKNE NSLLSKTMRL FSTNYRLLIT GTPLQNNLHE LWALLNFLLP EVFSSAETFD EWFQISGEND QQEVVQQLHK
0401: VLRPFLLRRL KSDVEKGLPP KKETILKVGM SQMQKQYYKA LLQKDLEVVN GGGERKRLLN IAMQLRKCCN HPYLFQGAEP GPPYTTGDHL VTNAGKMVLL
0501: DKLLPKLKDR DSRVLIFSQM TRLLDILEDY LMYRGYQYCR IDGNTGGDER DASIEAYNKP GSEKFVFLLS TRAGGLGINL ATADVVILYD SDWNPQVDLQ
0601: AQDRAHRIGQ KKEVQVFRFC TENAIEAKVI ERAYKKLALD ALVIQQGRLA EQKTVNKDEL LQMVRYGAEM VFSSKDSTIT DEDIDRIIAK GEEATAELDA
0701: KMKKFTEDAI QFKMDDSADF YDFDDDNKDE SKVDFKKIVS ENWNDPPKRE RKRNYSEVEY FKQTLRQGAP AKPKEPRIPR MPQLHDFQFF NIQRLTELYE
0801: KEVRYLMQAH QKTQMKDTIE VDEPEEVGDP LTAEEVEEKE LLLEEGFSTW SRRDFNAFIR ACEKYGRNDI KSIASEMEGK TEEEVERYAQ VFQVRYKELN
0901: DYDRIIKNIE RGEARISRKD EIMKAIGKKL DRYRNPWLEL KIQYGQNKGK LYNEECDRFM ICMVHKLGYG NWDELKAAFR TSPLFRFDWF VKSRTTQELA
1001: RRCDTLIRLI EKENQEFDER ERQARKEKKL SKSATPSKRP SGRQANESPS SLLKKRKQLS MDDYVSSGKR RK
0101: QQILDSQNAS IDADMNNKGK GRIKYLLQQT ELFAHFAKSD PSPSQKKGKG RGRHSSKLTE EEEDEECLKE EEGGIVGSGG TRLLTQPACI QGKLRDYQLA
0201: GLNWLIRLYE NGINGILADE MGLGKTLQTI SLLAYLHEYR GINGPHMVVA PKSTLGNWMN EIRRFCPVLR AVKFLGNPEE RRHIREELLV AGKFDICVTS
0301: FEMAIKEKTT LRRFSWRYII IDEAHRIKNE NSLLSKTMRL FSTNYRLLIT GTPLQNNLHE LWALLNFLLP EVFSSAETFD EWFQISGEND QQEVVQQLHK
0401: VLRPFLLRRL KSDVEKGLPP KKETILKVGM SQMQKQYYKA LLQKDLEVVN GGGERKRLLN IAMQLRKCCN HPYLFQGAEP GPPYTTGDHL VTNAGKMVLL
0501: DKLLPKLKDR DSRVLIFSQM TRLLDILEDY LMYRGYQYCR IDGNTGGDER DASIEAYNKP GSEKFVFLLS TRAGGLGINL ATADVVILYD SDWNPQVDLQ
0601: AQDRAHRIGQ KKEVQVFRFC TENAIEAKVI ERAYKKLALD ALVIQQGRLA EQKTVNKDEL LQMVRYGAEM VFSSKDSTIT DEDIDRIIAK GEEATAELDA
0701: KMKKFTEDAI QFKMDDSADF YDFDDDNKDE SKVDFKKIVS ENWNDPPKRE RKRNYSEVEY FKQTLRQGAP AKPKEPRIPR MPQLHDFQFF NIQRLTELYE
0801: KEVRYLMQAH QKTQMKDTIE VDEPEEVGDP LTAEEVEEKE LLLEEGFSTW SRRDFNAFIR ACEKYGRNDI KSIASEMEGK TEEEVERYAQ VFQVRYKELN
0901: DYDRIIKNIE RGEARISRKD EIMKAIGKKL DRYRNPWLEL KIQYGQNKGK LYNEECDRFM ICMVHKLGYG NWDELKAAFR TSPLFRFDWF VKSRTTQELA
1001: RRCDTLIRLI EKENQEFDER ERQARKEKKL SKSATPSKRP SGRQANESPS SLLKKRKQLS MDDYVSSGKR RK
Arabidopsis Description
CHR17Chromatin remodeling factor17 [Source:UniProtKB/TrEMBL;Acc:F4JY25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.